6SCT,6SCT,6SCT


Conserved Protein Domain Family
Clathrin

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pfam00637: Clathrin (This model is not part of the current CDD release)
Region in Clathrin and VPS
Each region is about 140 amino acids long. The regions are composed of multiple alpha helical repeats. They occur in the arm region of the Clathrin heavy chain.
Statistics
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PSSM-Id: 513622
Aligned: 106 rows
Threshold Bit Score: 74.1746
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6SCT_B         542 PLADITQIVDVFMEYNLIQQCTAFLLDALknnrPSEGPLQTRLLEMNLMHAP-QVADAILGnqMFTHYDRAHIAQLCEKA 620  pig
16_pfamImport    6 DLIGSPVLIKLFEEYNATEGLYYYLASLVnl--tDDKDLVYKYIEAAAKMKQyTEIERVVR--DNNTYDPERVKNYLKDA 81  
Q756A8         696 DLIGSDVLVKLFEEYKATEGLYYYLSSIVny--tDDKDLVFKYIKAAVRTGQfQEVQRIVR--DSNTYDPEKVKNFLKDA 771  Eremothecium...
Q0UXK7         645 DLLGATKIIDLLEKHRTAEGLYFFLGSIVnv--aEDKDVTFKYIEAATTMGQlNEVERVCR--ESNAYDPEKVKNFLKEA 720  Parastagonos...
Q00610         691 EQLSTQSLIELFESFKSFEGLFYFLGSIVnf--sQDPDVHFKYIQAACKTGQiKEVERICR--ESNCYDPERVKNFLKEA 766  human
Q0WLB5         705 EQLGVDACIKLFEQFKSYEGLYFFLGSYLsm--sEDPEIHFKYIEAAAKTGQiKEVERVTR--ESNFYDAEKTKNFLMEA 780  thale cress
A0CY10         693 QRLTIPACIKVFESVSAFEGVYLFLGSLInt--tSDKDIYYKYIEAAAKCNQiKELERVITe-KGDCYDADKVKNYLKEQ 769  Paramecium t...
P25870         692 DQITPEAIIAMFESFRLYEGLYLYLTQVVvt--sTSPEVHFKYIEAAAKINQfKEVERMCR--DSNYYDPEKTRDFLKEA 767  Dictyosteliu...
6SCT_C         691 EQLSTQSLIELFESFKSFEGLFYFLGSIVnf-sQD-PDVHFKYIQAACKTGQiKEVERICR--ESNCYDPERVKNFLKEA 766  pig
XP_022838184   703 EQLEIQSVVKMFDKFESHEGLFYYLGYFVnt--cEDKEVVYKFIEAASKIGQiKEVERVTR--ESDHYDPERVKVFLMEA 778  Ostreococcus...
6SCT_B         621 GLLQRALEHFTD--LYDIKRA-VVHTHLLNPEwLVNYFGSLSVEDSLECLRAMLSANIRQN 678  pig
16_pfamImport   82 NLEDQMPLVIVCdrFGFINELviYLYNSQNLK-FIESYVQQVNPSKTPEVVGSLIDLDCDE 141 
Q756A8         772 DIPDQLPLVIVCdkFNFVHDLvlYLYKTKNTK-FIEVYIQQVNPAKTPQVVAALLDVNCDE 831  Eremothecium gossypii
Q0UXK7         721 NLTEQLPLIIVCdrFNFIHDLvlYLYKKQQFK-SIEVYVQRVNPARTPAVIGGLLDVDCDE 780  Parastagonospora nodorum SN15
Q00610         767 KLTDQLPLIIVCdrFDFVHDLvlYLYRNNLQK-YIEIYVQKVNPSRLPVVIGGLLDVDCSE 826  human
Q0WLB5         781 KLPDARPLINVCdrFSFVPDLthYLYTNNMLR-YIEGYVQKVNPGNAPLVVGQLLDDECPE 840  thale cress
A0CY10         770 KLSDPRPLIFLCdmNGFVDELtrYLYKNGFTR-YIEIYIFKVNPNAAPGVFGTLIDLECDE 829  Paramecium tetraurelia
P25870         768 KLPDQLPLIIVCdrYEFISDLtnYLYKNNLSK-YIEAYVQKINPVNTPLVVGALLDLDCQE 827  Dictyostelium discoideum
6SCT_C         767 KLTDQLPLIIVCdrFDFVHDLvLYLYRNNLQK-YIEIYVQKVNPSRLPVVIGGLLDVDCSE 826  pig
XP_022838184   779 KLADARPLINVCdrHEFVGDLttYLYNNNMLR-YIEGYVQKVNPKQAPKVVGTLLDLECPD 838  Ostreococcus tauri
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