6SCT,6SCT,6SCT


Conserved Protein Domain Family
Clathrin

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pfam00637: Clathrin 
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Region in Clathrin and VPS
Each region is about 140 amino acids long. The regions are composed of multiple alpha helical repeats. They occur in the arm region of the Clathrin heavy chain.
Statistics
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PSSM-Id: 425791
Aligned: 126 rows
Threshold Bit Score: 72.2793
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6SCT_A       1427 SPRLDHTRAVNYFSKVKQLPLVKPYLRSVQN---HNnKSVNESLNNLFITEEDyqALRTSIDAYDNFDNISLAQRLEKHE 1503
Q4Q1R2        852 GAMCPIEELVDRVEEVGRLHLIKQWLEDRRSekkTD-KALYNALAKIYVDIGQ--SPEQFLSENEYYDAQVVGKYCETRD 928  Leishmania major
Q38B01        852 GTMCPIAELVDVAEERSRLRLIGPWLEARLAekkTD-TALHNAIAKLLVISGN--LPEKFIEENDYYDPVVMGKYCEDRD 928  Trypanosoma b...
Q4D5X2        852 GTMCPIAELVQAVEERSRLRLIQGWLEARLAekkTD-PALHNAVGKLYVDTDQ--QPDKFLLENAYYEPLVLGKYCENRD 928  Trypanosoma c...
6_pfamImport    5 QHTAPMEELIKETMKRERLRLLQQILEQRQAsgsVD-PATNNGIVLLAYNMGR--NPERALRENQYYDPKFVGEILAKRD 81  
Q4WP17        856 psVIPIDELVSEVETRNRLKLLLPFLEATLAtgnQQ-QAVYNALAKIYIDSNN--NPEKFLKENDMYDTLTVGKYCEKRD 932  Aspergillus f...
Q6CGR2        757 VGQVPVSELVEEVEKRNKLKLLLPFLEKTLNggsRD-TALFDALAKIYIDSNN--NPEKFLKENNEYNPLVVGKYCEKRD 833  Yarrowia lipo...
P25870        838 RNMCPADSLVEQVEKRNRLKLLLPWLEARVAegnIE-PAIHNALAKIYIDSNK--NPEAFLLHNQFYDSKVVGKYCEKRD 914  Dictyostelium...
A0CHK3        829 RGMCPIEPTVDEFEKRNKLRVLEQWLEARVTegnQI-PAIHNALAKIKIDTSQ--DPDGFLINNQFYDAKAVGKFCEERD 905  Paramecium te...
Q0WLB5        851 RSLLPVEPLVEECEKRNRLRLLTQFLEHLVSegsQD-VHVHNALGKIIIDSNN--NPEHFLTTNPYYDSKVVGKYCEKRD 927  thale cress
6SCT_A       1504 LIeFRRiaaYLFKG--NNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRE 1564
Q4Q1R2        929 PN-LAY---IIYCC--GHCSEMMIDLCHRNGMYKQLARYLVKEQSLDLWASVLGQNSAERQQL 985  Leishmania major
Q38B01        929 PN-LSY---LVYRK--AKMSTELVEITSKNGMWKQLARYLVKQQDPALWASVLTESSINRDRL 985  Trypanosoma brucei
Q4D5X2        929 PN-LSY---IAYRK--GHLSEELVELTTKNGMWKQLARYLVQEKNLQLWASTLKNDTKDRDRL 985  Trypanosoma cruzi
6_pfamImport   82 AH-LAC---IAYAK--GQCDDELIELTNTHQLYKEQARYLVNRQDENLWARVLNPENPHMKLV 138 
Q4WP17        933 PN-LAY---IAYRK--GQNDLELINITNENAMYRAQARYLVERADPEIWSFVLSENNLHRRPl 989  Aspergillus fumigatus
Q6CGR2        834 PY-LAF---ICYEK--GGLDDELVKITNENSMYKQQARYLLAKQDEALWNKVLSGD-EHKRQL 889  Yarrowia lipolytica
P25870        915 PY-LSF---VAYKR--GLCDYELIEVTNKNTLFKNQARYLVERQDPDLWAYVLSDQNEYKRSL 971  Dictyostelium discoideum
A0CHK3        906 PQ-LAV---LAYKRawGQCDQELINLTNKNEMYRVQAKYLVERQDVDLWAGVLQETNPHRKNL 964  Paramecium tetraurelia
Q0WLB5        928 PT-LAV---VAYRR--GQCDEELINVTNKNSLFKLQARYVVERMDGDLWDKVLDENNDYRRQL 984  thale cress
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