1V1H,3IZO


Conserved Protein Domain Family
Adeno_shaft
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pfam00608: Adeno_shaft (This model is not part of the current CDD release)
Adenoviral fibre protein (repeat/shaft region)
There is no separation between signal and noise. Specific attachment of adenovirus is achieved through interactions between host-cell receptors and the adenovirus fibre protein and is mediated by the globular carboxy-terminal domain of the adenovirus fibre protein, rather than the 'shaft' region represented by this family. The alignment of this family contains two copies of a fifteen residue repeat found in the 'shaft' region of adenoviral fibre proteins.
Links
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Statistics
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PSSM-Id: 513595
Aligned: 10 rows
Threshold Bit Score: 43.4484
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1V1H_A  26 FDTNTSESPDINPIKTKIGSGIDYnENGAMITKLGAGLSFdNSGA 70  synthetic construct
P03275  84 TTVTQPLKKTKSNISLDTSAPLTI-TSGALTVATTAPLIV-TSGA 126 Human adenovirus 2
P03275 129 VQSQAPLTVQDSKLSIATKGPITV-SDGKLALQTSAPLSGsDSDT 172 Human adenovirus 2
P03275 207 ISGPLQVAQNSDTLTVVTGPGVTV-EQNSLRTKVAGAIGYdSSNN 250 Human adenovirus 2
Q83893 274 INYSAPLVSLQDNLTLSYAQPLTV-SDNSLRLSLNSPLNTnSDGK 317 Ovine adenovirus 7
Q83893 367 LETTEPLEVADNALKLKLGKGLTV-SNNALTLNLGNGLTF-QQGL 409 Ovine adenovirus 7
P03275  34 VSPNGFQESPPGVLSLRVSEPLDT-SHGMLALKMGSGLTLdKAGN 77  Human adenovirus 2
Q83893 182 IKLKNPMKVEESSLALNYKNPLAI-SNDALSINIANPLTVnTSGS 225 Ovine adenovirus 7
P03275 344 FDTNTSESPDINPIKTKIGSGIDYnENGAMITKLGAGLSFdNSGA 388 Human adenovirus 2
3IZO_F  34 VSPNGFQESPPGVLSLRLSEPLVT-SNGMLALKMGNGLSLdEAGN 77  Human adenovirus 5
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