2DLL,2IRF,2O6G,2O61


Conserved Protein Domain Family
IRF

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pfam00605: IRF 
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Interferon regulatory factor transcription factor
This family of transcription factors are important in the regulation of interferons in response to infection by virus and in the regulation of interferon-inducible genes. Three of the five conserved tryptophan residues bind to DNA.
Statistics
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PSSM-Id: 425772
Aligned: 82 rows
Threshold Bit Score: 108.403
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DLL_A          8 KLRQWLIDQIDSGKY-PGLVWEN-EEKSIFRIPWKHAGKQDYNrEEDAALFKAWALFKGKFREGIDKP--DPPTWKTRLR 83   human
XP_002107832    5 VMTDWLKEILEENAV-EGIHYVN-GSKDTFAIKWVHASNKSYDpDCHGAIFKRWMKKSRKL----DKYksNYSMWKTNFR 78   Trichoplax ad...
XP_009020091    9 RLRDWLIQQANKNE---GASYYDdRDRNLIKIPWVHGSKKHWDsNVHCRIFKLWAEYSGRFiviiiinkkDPKIWKSNFR 85   Helobdella ro...
EKC20867      217 KMRPWLLEHLDQGSI-PGLSWQN-RTQRIFRISWKHAAHNCFNrTRDSDLFERWAYHTGRHHDG------NHKRWKANFR 288  Pacific oyster
EKC43155       18 KMRPWLMDMLKQGAT-QGLEWFD-ETQKLFKINWKHGSRHGFNtMKDASLFEKYAQHTGRW--DPDDP--SPKRWKANFR 91   Pacific oyster
Q4H3B1         28 QFKPWLIEQISSGNY-PGLEWIDsEQQRVFKLPWTKKNYPGW--EDHHKIFKAWAEHRSFI-RNQKPPtqHVSLMKSNFR 103  vase tunicate
NP_001071953   26 RFTTWLVQQISSGNY-LGLEWVEgSNKRIFKIPWTKQNFPNW--AEHHKIFEDWALLRGRWNTVTGQPnqSFSQMKSNFR 102  vase tunicate
2_pfamImport    1 PLRVWLLKRLNQAKYpDVVYWTD-KERGVFRILWTKKGNPNW--KQHFQIFEDWAKHRDNFRPDSPI---NYDQLKSNFR 74  
XP_009857957   12 TLRNWLFNRLNEETYgDALKWDG-NNKGVFHILWTKKGDPNW--ENHFQIFVGWAKHKDRFDCNSPI---NYDKLKSNFR 85   vase tunicate
NP_001122338   10 PLRHWLVKKIEESAF-DGLEWVN-REEKTFKIPWTQKKYPNW--EKHCEIFKAWAKHRGSTNLGDPF---DFKKLKGNFR 82   vase tunicate
2DLL_A         84 CALNKSNDFEELV-ERSQLdIS-DPYKVYRIV 113  human
XP_002107832   79 CAINSLPDVMCLSaTDSQFaDD-DKYKGYKIF 109  Trichoplax adhaerens
XP_009020091   86 CALNSLSDVKEVK-ELSRIqNGvEGYKVYKII 116  Helobdella robusta
EKC20867      289 CALNSLPDVIELK-DLGVRkGD-NAFKVYKFI 318  Pacific oyster
EKC43155       92 CALNSLQNVMEIK-KLGESkGV-HAFRVYQFL 121  Pacific oyster
Q4H3B1        104 TILRKCRDLEEQTnLHQLGlQT-GNYKVYKVL 134  vase tunicate
NP_001071953  103 TILRKCDYIKELHqSHQLGlQV-GNYKVYKLL 133  vase tunicate
2_pfamImport   75 NLIKKSSDFEELE--TVNNqQT-GNCKVFRVR 103 
XP_009857957   86 NLIKKTTDFEEIE--NVRNqQT-GNRKVYRFR 114  vase tunicate
NP_001122338   83 CALNKSDDFEEIKeRNVSDqQT-GNYKIYRLL 113  vase tunicate
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