2IRF,2O6G,2O61,2DLL


Conserved Protein Domain Family
IRF

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pfam00605: IRF (This model is not part of the current CDD release)
Interferon regulatory factor transcription factor
This family of transcription factors are important in the regulation of interferons in response to infection by virus and in the regulation of interferon-inducible genes. Three of the five conserved tryptophan residues bind to DNA.
Statistics
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PSSM-Id: 513592
Aligned: 59 rows
Threshold Bit Score: 111.512
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2IRF_G          7 RMRPWLEEQINSNTI-PGLKWLN-KEKKIFQIPWMHAARHGWDvEKDAPLFRNWAIHTGKHQPGIDKP--DPKTWKANFR 82  house mouse
XP_009017166   15 LLRPWLEKNLEDGNI-EGLEWMD-AEKTMFKVPWKHRSKKDWS-LKHSSVFLEWAKNTGRWSRGDSSP--NFAKLKTRLR 89 
XP_009009851    3 LLRPWLENLIESQVV-HGLEWLD-QKQLIFKIPWKHRSKKSWS-VEHSSVFLEWARNTGRWTPGDPEP--NYAQLKTRLR 77 
Q4H3B1         28 QFKPWLIEQISSGNY-PGLEWIDsEQQRVFKLPWTKKNYPGW--EDHHKIFKAWAEHRSFI-RNQKPPtqHVSLMKSNFR 103 vase tunicate
10_pfamImport   1 PLRVWLLKRLNQAKYpDVVYWTD-KERGVFRILWTKKGNPNW--KQHFQIFEDWAKHRDNFRPDSPI---NYDQLKSNFR 74 
XP_009857957   12 TLRNWLFNRLNEETYgDALKWDG-NNKGVFHILWTKKGDPNW--ENHFQIFVGWAKHKDRFDCNSPI---NYDKLKSNFR 85 
11_pfamImport   1 PLRNWLIKKIEQKEF-DGLLWID-EDQKIFKIPWTQKKYPNW--EKHCEIFVAWARHRGSYDESSKT---DYKKLKGNFR 73 
EDO47338       11 RFPVWLRELVDSGEA-QGLEWLD-SEKKTFKIPWTRVDSPDFDvTRDAVVFQRWAEFTGRFRRGERA---DPSVWKTRFR 85 
EDO34919        7 RLRPWLEEMINSADI-PGLCWTD-KEKTTFRVTWKHAGKPDFDlDRDAALFRKWAEHTGKYKPG-EQP--DPSTWKTRFR 81 
NP_001071953   26 RFTTWLVQQISSGNY-LGLEWVEgSNKRIFKIPWTKQNFPNW--AEHHKIFEDWALLRGRWNTVTGQPnqSFSQMKSNFR 102 vase tunicate
2IRF_G         83 CAMNSLPDIEEVK-DRSIKkGN--NAFRVYRML 112 house mouse
XP_009017166   90 CAFNKAPDIEEMK-SKHSCqGE--EPYKVYRFK 119
XP_009009851   78 CAFNKAPDILEIK-EMHKTkCE--EAYKVYRFI 107
Q4H3B1        104 TILRKCRDLEEQTnLHQLGlQT--GNYKVYKVL 134 vase tunicate
10_pfamImport  75 NLIKKSSDFEELE--TVNNqQT--GNCKVFRVR 103
XP_009857957   86 NLIKKTTDFEEIE--NVRNqQT--GNRKVYRFR 114
11_pfamImport  74 CALNKSDDFEEIReRSVTNqQT--GNYKIYRIL 104
EDO47338       86 CAIRKMTDIQEVKvHNSLEeKGgnRPY----RV 114
EDO34919       82 CALHKMPDIEEIR-VPHSLdDK--EPFRVFRLK 111
NP_001071953  103 TILRKCDYIKELHqSHQLGlQV--GNYKVYKLL 133 vase tunicate
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