4I3H


Conserved Protein Domain Family
DNA_topoisoIV

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pfam00521: DNA_topoisoIV 
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DNA gyrase/topoisomerase IV, subunit A
Statistics
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PSSM-Id: 425731
Aligned: 78 rows
Threshold Bit Score: 358.787
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4I3H_A    676 RALPDIRDGLKPVQRRILYSMNKdsNTFdKSYRKSAKSVGNI--MGNFHpHGDSSIYDAMVRMSQNWKN--REILVEMHG 751  Streptococcus pne...
CAM66843  683 RAIPHCVDGLKPSQRKILWAMLR--RHN-SEASKVAQLSGYIseASAFH-HGEASLQETIVKMAQNFTGgnNINLLVPEG 758  Leishmania infant...
Q9QSK1    711 RSLPHLIDGLKESQRKVIFGLKQ--WNG-KNNIKVAQLGAFVaqKTDYK-HGEQNLFDTIIKMAQTFVGanNIPLLEEDG 786  Invertebrate irid...
Q4A235    664 RSIPKMLDGQKAGQRKVVFYALN--HVG-KNEAKVAQMAGTAaqVTQYH-HGEVSLANTIIGMAATYTGshNLPLLYPSG 739  Emiliania huxleyi...
A0BK44    365 RSIPSSIDGLKPTQRKIIHTLLN--HS--KQEYKVSSLSGLVttYAQYH-HGEQSLQQTVVAMAQNFTGsnNINLLLPIG 439  Paramecium tetrau...
Q6C7Z9    783 RSIASVCDGFKPGQRKVLFGSFK--RKF-TVSIRVAQLVGYIseHTGYH-HGEASLGSTIMAMAQDFAGsnNIYLMKPDG 858  Yarrowia lipolytica
Q383C4    683 RSIPSVVDGLKPGQRKIMFSAFK--RNL-VRSLKVAQLAGYVseHAAYH-HGEQSLVQTIVGLAQDYVGanNVPLLYRDG 758  Trypanosoma brucei
CAM39778  679 RSIPSAIDGFKPGQRKILFSCFK--RNL-VNSIKVVQLAGYVseHSAYH-HGEQSLVQTIVGMAQDFVGsnNVPLLRKDG 754  Leishmania brazil...
P90520    808 RSIPSLIDGLKPGQRKILFASFK--RRL-TNEIKVSQLSGYVaeQTSYH-HGEQSLNSTIVKMAHNFVGsnNLPLLTPSG 883  Dictyostelium dis...
P34534    720 RSIPSLIDGLKPSQRKILWTLLN--NMDeSTEIKVSQLAGAVahRQSYH-HGEESLVRTIIRMGQTFCGssNLPLLQPIG 796  Caenorhabditis el...
4I3H_A    752 NNGSm-DGDPP-AAMRYTEARLSEIAGYLLQDIEKKTVPFAWNfDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPH 829  Streptococcus pne...
CAM66843  759 QFGSrqQLGNDhAAPRYIFTKLSRFARLLFPEEDDPLLDYMDE-EGTFVEPHHYVPILPMLLCNGAVGIGFGFATTIPSF 837  Leishmania infant...
Q9QSK1    787 QFGTrlSGGKDaASPRYIFVNQPPILNKIFRPEDDPILNYTLD-----GEPVFYAPVIPLICINGSVGVGTGFSCNIPMF 861  Invertebrate irid...
Q4A235    740 QFGSr-HAKNSaAAPRYIFTHISSFLPRLIKSEDNDVLTYNVD-ENKKVEPTVYIPVIPIVLVNGANGIGTGWKCDVPQY 817  Emiliania huxleyi...
A0BK44    440 QFGTrsMGGKDaAQARYISTKLSSLTTKLFNEDDLHTLNYLDE-EGYTVEPFWFTPILPLVLINGAEGIGTGWSTQVPNF 518  Paramecium tetrau...
Q6C7Z9    859 GFGSrsQGGKDaAAMRYAQTELMDITKAIFNKQDEPLYNYVTD-DDTPVEPEYYLPVLPMLLVNGCEGIGSGWSTSIPPY 937  Yarrowia lipolytica
Q383C4    759 QFGTrlQGGKDhAAGRYIFTRLTDIARRIYHPSDDFIVEYRDD-DGLSVEPFYYVPVIPMVLVNGTAGIGTGFATNIPNY 837  Trypanosoma brucei
CAM39778  755 QFGTrlHGGKDhAAGRYIFTRLMHVARAIFHPADDFVVEYKDD-DGLSVEPFYYIPVIPMVLVNGTTGIGTGFSTSIPNY 833  Leishmania brazil...
P90520    884 QFGTrlQGGSDsASARYIFTKLEPVARYLFNELDDPLLNYLEE-EGESIQPDYYIPIIPMLLVNGSEGIGVGMSTSIPLF 962  Dictyostelium dis...
P34534    797 QFGTrhEGGNDaASARYIFTALAPTTRLLFPQADDDLLQKNVE-EGMVVEPTWLCPIVPLILINGTEGIGTGWSTKIANR 875  Caenorhabditis el...
4I3H_A    830 NLAEVIDAAVYMI-DHPtAkidklMEf---LPGPDFPTGAIIQ---GRDEikkaYETGkGRVV--VRSKtEieklkggke 900  Streptococcus pne...
CAM66843  838 HPLDVSAAVRAMI-NGEsAkq--vVR----NLVPWAVGFQGTVrrgPDNE----FIAV-GKYTahPNG------------ 893  Leishmania infant...
Q9QSK1    862 NPSEIIDGLKQWI-NMReQ-----GEkyvfKYKPWYKGFTGKIeknGSGR----YISY-GTLSneASNNgMy-------- 922  Invertebrate irid...
Q4A235    818 NPLEVIDACKRMAnGGElS-----TS----KWVPWYVGYNGKMeetTDG-----FNSI-GTYE--VSGN----------- 869  Emiliania huxleyi...
A0BK44    519 NPREICQQIKRKL-RGE-E-----FE----ELVPWYKGFTGSI-----TAgtnqYIAK-GSFI--QHKN----------- 568  Paramecium tetrau...
Q6C7Z9    938 NPLDIVDNLRRML-KDE-P-----PV----PMIPWFRGWHGEVepvGDGR----YKVK-GLIE--QVDE-R--------- 989  Yarrowia lipolytica
Q383C4    838 SPLDVIDNLNRLL-SGE-E-----LQ----PMKPWYFGFTGTIeerEKGK----FVSS-GCAT--VRPD-G--------- 889  Trypanosoma brucei
CAM39778  834 NPLEVIRNLERLM-RGE-E-----VH----KMQPWYFGFTGTMeekEPGK----FISH-GRYE--VRPD-G--------- 885  Leishmania brazil...
P90520    963 SPIDIIDQLMLRL-NNQvA-----LK----KLIPWYRGFKGTI---SPDRh--tYRTN-GVIK--LVGR----------- 1013 Dictyostelium dis...
P34534    876 NPIDIIDMIRRKI-DSIsT------Ey---EIPPFYEEFRGKL----EVVtptkFISS-GKIQl-IRPErKnas----tf 935  Caenorhabditis el...
4I3H_A    901 QIVITEIPYEINKANLVKKIDDVR-VNN-----KVAgiaEVRDE-SDRdGLRIAIELKK---DAN---TELVLNyLFKYT 967  Streptococcus pne...
CAM66843  894 RFHISEIPWMTSIEAFRLHISSLAsAD------VVQ---RIADYsGAN-HIDIDLIVR----DGS---LTTWAE-CETDL 955  Leishmania infant...
Q9QSK1    923 QYTVSELPINMWTDKFKEMCDQYReSN------LIK---TCDNYsEVT-TVNFKIS--------------SEHElTIENL 978  Invertebrate irid...
Q4A235    870 TLTVTELPIGRATEDWIESIQSLIp-------dKIK---NYEKNlGPD-SVTIKLNLT------------SPIDdPVATL 926  Emiliania huxleyi...
A0BK44    569 HLYITEIPPKKSVKEYQAFIQSKMeVAEgksepEIL---DMKEYhAGN-KVCFELKVT----------DEVLKQdIEKYF 634  Paramecium tetrau...
Q6C7Z9    990 TLCITELPARMWTISMKEFLLSSLiDSKne-kgWIE---DFTEDhGF--RVKFNITLSe--kEME---KTRQIG-LRERF 1057 Yarrowia lipolytica
Q383C4    890 VVHITELPIGTWTQQYKKFLEDLReRE------IVI---QYREHnTDV-TVDFEVFIHp--eVLR---QWVAQGcVEERL 954  Trypanosoma brucei
CAM39778  886 VVCITELPIGVWTQTYKKFLEDMReKE------LVV---QYREHtTDV-TVDFEVFLHp--qVLE---QWVAQDvVEERL 950  Leishmania brazil...
P90520   1014 NLEITELPIGRWTSDYKEVLNDLI-DKD-----VIK---SFQES-NTEnSVHFTILLNNnqlEQM---EDLTENeLIKLF 1080 Dictyostelium dis...
P34534    936 SIEIVELPIGIWTSKYKEKLSKIV-ETL-----PVL---EFSERhTEK-RVHFRITLDR---KKSsrfLQKSNSdLLNYF 1002 Caenorhabditis el...
4I3H_A    968 DLQINYNFNMVAIDNF-T--PRQV-GIVPILSSYIAHRREVILARSRFDKEKAEKRLHIVEglirviSILDEVIALIRAS 1043 Streptococcus pne...
CAM66843  956 ALAQRIYI-NGTVFSPtGtlSPIDsDLSPVLQWHYDRRLDLYKRRRTRKIGLMEMDLARLQ------STRKFVEHFRQGQ 1028 Leishmania infant...
Q9QSK1    979 KLRSYIHTSNMVMFDHeGkiHKYE-TLNGIMQRFCKERIKIYEKRRQYMLQKLNKSLTISE------NKKRFMEDVMNQK 1051 Invertebrate irid...
Q4A235    927 KLSTKLQTNRMWLYNAkNkiTHYA-GPTQIIQEHARERLKLYEASRISQIEKASHKMDLLN------NKIRYIMEFIEGK 999  Emiliania huxleyi...
A0BK44    635 KLQTTIAMTNLVLFNEkGllKRYS-NVSEILDEFYQTRIKFYQLRKEYLLSKYQNELELVQ------SKSKFIEGMIDNS 707  Paramecium tetrau...
Q6C7Z9   1058 KLISSLSTSNMVAFDPeGriKKYD-SPEAIMKEYFPVRLEFYQKRKDRLVSDFEQQLEKLT------AQARFIKLIIDKK 1130 Yarrowia lipolytica
Q383C4    955 QLREYIHATNIIAFDReGkiTKYL-DAESVLKEFYLVRLEYYARRREFLLEQLQRAALKLE------NMVRFVNEVIDGT 1027 Trypanosoma brucei
CAM39778  951 QLKEYVHATNIIAFNKeGqiTKYW-DAESVLKDFYLVRLDYYAKRKDYLLGELRRLTSKLE------NMVRFVREVVEGT 1023 Leishmania brazil...
P90520   1081 KLSASLNFHLTCFDENsKi-QKLE-SVEEIIDQFYKVRLQFYGKRREYLLKSLDNQIKRLT------TTIQFLEVIASGK 1152 Dictyostelium dis...
P34534   1003 KLRTSLTENRVLFDRNgEl-KEFG-NISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVE------NQLNFIEMVTNGT 1074 Caenorhabditis el...
4I3H_A   1044 EN-KADAKENLKVsyDFTE------------------------------------------------------------- 1061 Streptococcus pne...
CAM66843 1029 IDfLNATDDTLHK--TCVKlglvr-------------------------------------------------------- 1050 Leishmania infant...
Q9QSK1   1052 IKiLLQEDEVVHQ--QLLDmnyyk-------------------------------------------------------- 1073 Invertebrate irid...
Q4A235   1000 IKiGKMSTSSLNE--YLAQngylr-------------------------------------------------------- 1021 Emiliania huxleyi...
A0BK44    708 IQlRGLKKMEMCK--KLQSlgfkgiskmekvkst----------------------------------------riskdf 745  Paramecium tetrau...
Q6C7Z9   1131 LNiNNKGRKVLIA--ELSElkfprygkngerlasdakaaiaed-------------------eeapsdevaedlaeaeei 1189 Yarrowia lipolytica
Q383C4   1028 FIvTRRSMKDVLK--DLKQrgytpfppqqkkkmssttivdeedndgarkilpdvfefesvplceqvigkilctaepeein 1105 Trypanosoma brucei
CAM39778 1024 LVvTKRKKKELLE--DLQGrlylpfpphakkklssttveeeggeaepttq-----nseedvlgmgsaadggvddgdaetp 1096 Leishmania brazil...
P90520   1153 LKiQGRSKQDLIK--ELESgeivgfe-----------------------------------------------------n 1177 Dictyostelium dis...
P34534   1075 IEiRSMGRNQLEE--KLQEmgfrvdpma--------------------------------------------------ti 1102 Caenorhabditis el...
4I3H_A   1062 ------EQAEAIV-TLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDertmyNLMKKEL 1115 Streptococcus pneumoniae TIGR4
CAM66843 1051 ----vdesFDYIL-KKPITFFTRTSTEKLQADIAKTQAQIEELKRTTPV-----KMWLTEL 1101 Leishmania infantum JPCM5
Q9QSK1   1074 ---ddegeFDYLL-NMNIGGFRKKNVDKLISKIDDLKKDIMWYTNTNEG-----QMWLKDI 1125 Invertebrate iridescent virus 6
Q4A235   1022 ----snnsFRYLTdDISTGQLTTDNVDKLRNQIRNITTDIDALRETTAN-----KMWITDL 1073 Emiliania huxleyi virus 86
A0BK44    746 dadnlekqYDYLL-SMPMWNFSEEKITAFKQQIKQLQDQITALNKKTPQ-----QIWSEDL 800  Paramecium tetraurelia
Q6C7Z9   1190 hgkiptNGYDYLL-GMALWSLTKERYEKLLRERDGKEEELIELLKKSAK-----DIWMDDL 1244 Yarrowia lipolytica
Q383C4   1106 mwkgvlVEYDYLL-SLRMVDLTVEMAMYFRTKREQMLNKHNFVLSASSK-----DLWREDL 1160 Trypanosoma brucei
CAM39778 1097 evrratRNYDYLL-GMKLWSLTAEMIARLEAQLARARHDTATMEARTPK-----DMWMEDL 1151 Leishmania braziliensis MHOM/BR/75/M...
P90520   1178 fgthppEVYQHLF-SLSILDITKERIDNLTNQLTKRKSEHQSISSSDPK-----SLWTADL 1232 Dictyostelium discoideum
P34534   1103 aknskkANYGYLL-EMPVSRLTSDEMKRLEERKSRRRTELEAAESADWK-----SVWRSEL 1157 Caenorhabditis elegans
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