Conserved Protein Domain Family
GP120

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pfam00516: GP120 
Envelope glycoprotein GP120
The envelope glycoprotein Gp160 of HIV1 is cleaved into the surface protein Gp120 and the transmembrane protein Gp41. The entry of HIV requires interaction of viral GP120 with the CD4 glycoprotein and a chemokine receptor on the cell surface. Gp160 us proteolytically cleaved n the trans-Golgi and activated by cellular furin or furin-like proteases to produce gp120 and gp41.
Statistics
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PSSM-Id: 278917
Aligned: 2 rows
Threshold Bit Score: 887.202
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P18094  24 QYVTVFYGIPAWKNASIPLFCA-------TKNRDTWGTIQCLPDNDDYQEIIL-NVTEAFDAWNNTVTEQAVEDVWHLFE 95  Human immunodeficienc...
P04578  34 LWVTVYYGVPVWKEATTTLFCAsdakaydTEVHNVWATHACVPTDPNPQEVVLvNVTENFNMWKNDMVEQMHEDIISLWD 113 HIV-1 M:B_HXB2R
P18094  96 TSIKPCVKLTPLCVAMNCSRVQGNTTTpnprtsssttsrpPTSAASIINETSncienntcaglgyeEMMQCEFNMK-GLE 174 Human immunodeficienc...
P04578 114 QSLKPCVKLTPLCVSLKCTDLKNDTNT-------------NSSSGRMIMEKG--------------EIKNCSFNIStSIR 166 HIV-1 M:B_HXB2R
P18094 175 QDKKRRYKDTWYLEDVVCDNTTagTCY-MRHCNTSIIKESCDKHYWDAMRFRYCAPPGFALLRCNDTNYSGFEPkCTKVV 253 Human immunodeficienc...
P04578 167 GKVQKEYAFFYKLDIIPIDNDT--TSYkLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGP-CTNVS 243 HIV-1 M:B_HXB2R
P18094 254 AASCTRMMETQTSTWFGFNGTRAENRTYIywhgR-----DN-RTII-SLNKyyNLTMRCKRPGNKTVLPITLMSG----L 322 Human immunodeficienc...
P04578 244 TVQCTHGIRPVVSTQLLLNGSLAEEEVVI----RsvnftDNaKTIIvQLNT--SVEINCTRPNNNTRKRIRIQRGpgraF 317 HIV-1 M:B_HXB2R
P18094 323 VFHSQPINTrpRQAWCRFG-GRWREAMQEVKQTLVQHprykgINDTGKINFtKPGAGSDPEVAFMWTNCRGEFLYCNMTW 401 Human immunodeficienc...
P04578 318 VTIGKIGNM--RQAHCNISrAKWNNTLKQIASKLREQ-----FGNNKTIIF-KQSSGGDPEIVTHSFNCGGEFFYCNSTQ 389 HIV-1 M:B_HXB2R
P18094 402 FLN-------W-VEDKNQTRRN-----YCHIKQIINTWHKVGKNVYLPPREGELACESTVTSIIANIDIDKNRTHTNItF 468 Human immunodeficienc...
P04578 390 LFNstwfnstWsTEGSNNTEGSdtitlPCRIKQIINMWQKVGKAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEI-F 468 HIV-1 M:B_HXB2R
P18094 469 ---SAEVAELYRLELGDYKLIEITPIGFAPTDQRRysSTPVRNKR 510 Human immunodeficiency virus type 2 (ISOLATE BEN)
P04578 469 rpgGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKR--RVVQREKR 511 HIV-1 M:B_HXB2R
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