3TJ0,2Q06


Conserved Protein Domain Family
Flu_NP

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pfam00506: Flu_NP (This model is not part of the current CDD release)
Influenza virus nucleoprotein
Statistics
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PSSM-Id: 513511
Aligned: 4 rows
Threshold Bit Score: 832.006
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3TJ0_A  40 LAPPSNKRtrnpSPERATTSSEddvgrktqkKQTPTEIKKSVYNMVVKLGEFYNQMMVKAGLNdDMERNLIQNAHAVERI 119 Influenza B virus (B/...
Q9Q0U8   1 MASQGTKR----SYEQMETGGE---------RQNATEIRASVGRMVGGIGRFYIQMCTELKLS-DYEGRLIQNSITIERM 66  Influenza A virus (A/...
P04665  38 LAPPSNKRtrnpSPERTTTSSEtdigrkiqkKQTPTEIKKSVYKMVVKLGEFYNQMMVKAGLNdDMERNLIQNAQAVERI 117 Influenza B virus (B/...
2Q06_A   7 MASQGTKR----SYEQMETGGE---------RQNATEIRASVGRMVGGIGRFYIQMCTELKLS-DQEGRLIQNSITIERM 72  Influenza A virus
3TJ0_A 120 LLAATDDKKTEFQKKKNArdvkEGKeeiDHNKTGGTFYKMvRDDKTIyfsPIRITFLKEEVKTMYK-TTMGSDGFSGLNH 198 Influenza B virus (B/...
Q9Q0U8  67 VLSAFDERRNKYLEEHPS----AGK---DPKKTGGPIYRR-RDGKWV---RELILYDKEEIRRIWRqANNGEDATAGLTH 135 Influenza A virus (A/...
P04665 118 LLAATDDKKTEYQKKRNArdvkEGKeeiDHNKTGGTFYKMvRDDKTIyfsPIKITFLKEEVKTMYK-TTMGSDGFSGLNH 196 Influenza B virus (B/...
2Q06_A  73 VLSAFDERRNRYLEEHPS----AGK---DPKKTGGPIYRR-RDGKWV---RELILYDKEEIRRIWRqANNGEDATAGLTH 141 Influenza A virus
3TJ0_A 199 IMIGHSQMNDVCFQRSKALKRVGLDPSLISTFAGSTIPRRSGATGVAIKGGGTLVAEAIRFIGRAMADRGLLR---DIKA 275 Influenza B virus (B/...
Q9Q0U8 136 MMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTMVMELIRMIKRGINDRNFWRgenGRRT 215 Influenza A virus (A/...
P04665 197 IMIGHSQMNDVCFQRSKGLKRVGLDPSLISTFAGSTLPRRSGTTGVAIKGGGTLVDEAIRFIGRAMADRGLLR---DIKA 273 Influenza B virus (B/...
2Q06_A 142 MMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAIKGVGTMVMELIRMIKRGINDRNFWRgenGRRT 221 Influenza A virus
3TJ0_A 276 KTAYEKILLNLKNKCSAPQQKALVDQVIGSRNPGIADIEDLTLLARSMVVVRPSVASKVVLPISIY--AKIPQLGFNVEE 353 Influenza B virus (B/...
Q9Q0U8 216 RIAYERMCNILKGKFQTAAQRAMMDQVRESRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYglAVASGYDFEREG 295 Influenza A virus (A/...
P04665 274 KTAYEKILLNLKNKCSAPQQKALVDQVIGSRNPGIADIEDLTLLARSMVVVRPSVASKVVLPISIY--AKIPQLGFNTEE 351 Influenza B virus (B/...
2Q06_A 222 RIAYERMCNILKGKFQTAAQKAMMDQVRESRNPGNAEIEDLIFLARSALILRGSIAHKSCLPACVYglAVASGYDFEREG 301 Influenza A virus
3TJ0_A 354 YSMVGYEAMALYNMATPVSILRMGDDAKDKSQLFFMSCFGAAYEDLRVLSALTGTEFKPRSALKCKGFHVPAKEQVEGMG 433 Influenza B virus (B/...
Q9Q0U8 296 YSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVAPRGQLSTRGVQIASNENMETMD 375 Influenza A virus (A/...
P04665 352 YSMVGYEAMALYNMATPVSILRMGDDAKDKSQLFFMSCFGAAYEDLRVLSALTGTEFKPRSALKCKGFHVPAKEQVEGMG 431 Influenza B virus (B/...
2Q06_A 302 YSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMD 381 Influenza A virus
3TJ0_A 434 AALMSIKLQFWAPMTRSGGNEVGGDGGSGQISCSPVFAVERPIALSKQAVRRMLSMNIEGRDADVKGNLLKMMNDSMAKK 513 Influenza B virus (B/...
Q9Q0U8 376 SSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFTGNTEGRTSDMRTEIIRMMESSRPED 455 Influenza A virus (A/...
P04665 432 AALMSIKLQFWAPMTRSGGNEVSGEGGSGQISCSPVFAVERPIALSKQAVRRMLSMNVEGRDADVKGNLLKMMNDSMAKK 511 Influenza B virus (B/...
2Q06_A 382 SSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFKGNTEGRTSDMRTEIIRMMESARPED 461 Influenza A virus
3TJ0_A 514 TSgnaFIGKKMFQISDKNKTNPVeiqikqtIPNF--------FFGrDTAEDYDD 559 Influenza B virus (B/Managua/4577.01/2008)
Q9Q0U8 456 VS---FQGRGVFELSDEKATNPI-------VPSFdmsnegsyFFG-DNAEEYDN 498 Influenza A virus (A/goose/Guangdong/1/1996(H5N1))
P04665 512 TSgnaFIGKKMFQISDKNKVNPIeipikqtIPNF--------FFGrDTAEDYDD 557 Influenza B virus (B/Lee/1940)
2Q06_A 462 VS---FQGRGVFELSDEKATNPI-------VPSFdmsnegsyFFG-DNAEEYDN 504 Influenza A virus
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