8E9H,6NBQ,7NYR,7NYU,7F9O,7AQQ,8QBY,7ZM8,6ZIY


Conserved Protein Domain Family
Oxidored_q3

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pfam00499: Oxidored_q3 (This model is not part of the current CDD release)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
Statistics
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PSSM-Id: 513504
Aligned: 580 rows
Threshold Bit Score: 30.5663
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8E9H_J                     35 IGVVAARKAVYSAVFLACTMISLAVLYIAQDAPFLGVVQIVVYTGAVMMLFLFVLMLIg---VDLTeslVETIKGHRIAa 111 My...
P15959                     35 IYVILTKNPIVSVLFLILLFGGISSYLNIIGLNFIGLSYIIVYIGAVSILFLFILMLInirtSELQ---SNTSNSIPLT- 110 Po...
52_pfamImport               3 VLIIINKNPIISVLYLIGLFVNISVLLILVGFGFIGLSYILVYVGAVSILFLFILMLIniriSELT---NETSNYTPLA- 78 
jcvi:cds.TSTA_m0140A       31 ISIIINKNPIISVLFLIGLFVNISTLLIIIGFGFIGLSYILVYVGAVSILFLFILMLIniriSELT---NETNNDTPLA- 106
REF_WGS:AACD:ANID_20011T0  45 VFTIISRNPVVSVLFLIGLFVNIAGILILAGINYLGLSYILVYVGAVSILFLFILMLIniriSELL---SETNNDIPLA- 120
jcvi:cds.ATEG_m0120A       32 VLTIVSRNPIVSVLFLIGLFVNVAGLLILVGLNYIGLSYILVYVGAVSILFLFILMLIniriSELL---SETNNDIPLA- 107
jcvi:cds.Pc_m0110A         32 ILTISSRNPVVSVLFLIGLFVNVAGLLILVGYNFIGLAYILVYVGAVSILFLFILMLInirvSELF---NDTNNDLPLA- 107
XP_045282993               29 LYTIISKNPVVSIFFLIGLFLSISCYLFFIGLEFIGLSYLLVYVGAVSILFIFILMLIniriSELL---SETYNYIPLA- 104
Q1XA97                     29 LYTILNKNPVISIFFLIGLFSSISCYLFLIGLEFIGLSYLLVYIGAVSILFLFILMLInlriSELT---TKTTNSLPLA- 104 Pa...
XP_009161810               22 IFTIISKNPIVSVLHLIMLFSCISCYLIFLGIKFIGLSYLLVYVGAVSILFLFILMLInirvSELI---SNTNNNIPLA- 97 
8E9H_J                    112 LIAGAGFGILVIAGIGNVS--------------------------------------VAGFSgLAAANSGGNVEGLAALI 153 My...
P15959                    111 IFIGIIFSNFLFPMLPYDIvmlsnfynnyfsedfytidvnindnnlnnlynnvlyfmTSVIW-DGSVIDFNHITAIGNIM 189 Po...
52_pfamImport              79 ILTVMLFYFLVGRILPGNFillntnlvnsyiidt---------yvnehiydeliqyaSSKSW-DTSLVDMTHITGIGNVM 148
jcvi:cds.TSTA_m0140A      107 ILTVMLFYFLIARILPGNLnflntnvdnshvidv---------nineyiydeqiqyaSSKSW-DTSLVDITHISGIGNVM 176
REF_WGS:AACD:ANID_20011T0 121 VLTVLLFYYIIGQVLPCNLtdktiisslsnrftgiyni-disnqssivginqeigyvSSKGW-DNTLVEFTQISGIGNIM 198
jcvi:cds.ATEG_m0120A      108 VLTVLLFYNIVGQVLPSNLtdntivsylsnsfsevynvqldnelfnindlkqeiayaSSKGW-DSSLVEFTHITGIGNIM 186
jcvi:cds.Pc_m0110A        108 SLTIILFYYIIAQVLPINFtensivsylsnsysdvynvqldnelfnlvdlkqqigyaSSKGW-DNSLIEPTHIASIGNIM 186
XP_045282993              105 MLSVILFIYILGQNIPNNIsvlgynkfenlkq------------eyffnykediqyvISLNW-DNSLVNNTQISSIGNVL 171
Q1XA97                    105 IFSFILFIFILNFNLPINTrdnpe-----------------------------iiyvISLNW-DNILINNTQINSIGNIL 154 Pa...
XP_009161810               98 ILAILALF------IPYNNlttdtktnf---------------------ypvdiffvSSNNW-DSNLVDITDITSIGNVM 149
8E9H_J                    154 FTRYLWAFELTSALLITAALGAMVL 178 Mycolicibacterium smegmatis MC2 155
P15959                    190 YTIYNIWLIIASFILLLAMVGSIVI 214 Podospora anserina S mat+
52_pfamImport             149 YTNYAILLIIASIILLLAMVGSIVI 173
jcvi:cds.TSTA_m0140A      177 YTNYAIWLIIASIILLLAMVGSIVI 201
REF_WGS:AACD:ANID_20011T0 199 YTNYSIWLIISSVILLLGMVGAIVI 223
jcvi:cds.ATEG_m0120A      187 YTSYSLWLIITSVILLLGMVGAIAI 211
jcvi:cds.Pc_m0110A        187 YTSYSMWLIVTSIILLLGMVGAIVI 211
XP_045282993              172 YTNYSIWLLIISIILLLAMVGTIVI 196
Q1XA97                    155 YTNYSLWLIILSVILLLAMVGSIVI 179 Paracoccidioides brasiliensis
XP_009161810              150 YTNYSIWLLITSIILLLAMVGSIVI 174
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