5DKU,2AJQ,1D9F


Conserved Protein Domain Family
DNA_pol_A

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pfam00476: DNA_pol_A 
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DNA polymerase family A
Statistics
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PSSM-Id: 425705
Aligned: 659 rows
Threshold Bit Score: 189.965
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5DKU_A        261 LENLQKstneilnelniekdnlkkklkdeninvnsqqqvlkALQknnvrdisnkliEN----------TSdsnlknflnh 330  Plasmodium fa...
XP_003646670  541 KNYLMAdpneye------------------------srdgwTLL------------RIphpngpdfncTN---------- 574  Eremothecium ...
CCE94246      560 QKNPAAae-------------------------------nhVLF------------KIphpngpenncTT---------- 586  Torulaspora d...
P15801        533 QEEEEIrthnlg------------------------lqctgVLF------------KVphpngptfncTN---------- 566  Saccharomyces...
CCK70349      561 QLEYEDeynv----------------------------tgeVLF------------RIphpdgptmncTT---------- 590  Kazachstania ...
EGY14736      470 CDMADEkvealr------------------------qdtegVYF------------KLphkdgptarcAN---------- 503  Verticillium ...
EME47542      525 CNMLEEedltlr------------------------ddyqhTYF------------KLphkdgpdarcAS---------- 558  Dothistroma s...
XP_002584305  565 CDMMEEksealk------------------------sdtqhVYY------------KLphkdgpdarcAS---------- 598  Uncinocarpus ...
EPS32455      565 CDMNEEqnlqlr------------------------ddrknAYF------------KIphkdgpqarcTN---------- 598  Penicillium o...
CCG81108      538 LDMSKEsiqalq------------------------edntaIYF------------KVphkdgptarvAS---------- 571  Taphrina defo...
5DKU_A        331 EeiIS--LRNYRRLYKLYSAF--YLKLPLHIn-----TK-TNKIHTTFN---------------------QLKTFSGRFS 379  Plasmodium fa...
XP_003646670  575 L--LSkpYLHFMEKGILQSQYplAREALKINssgaywTAsRDRIMGQHVvskaefpnq----fkmfdgspTNSVDFGAII 648  Eremothecium ...
CCE94246      587 L--LSkpYIHFFEKGILTSESefAHDALKINscgsywMSaRERILSQFVvpqssfpnaf-kplkdgkekfEDHEDLGIIL 663  Torulaspora d...
P15801        567 L--LTksYNHFFEKGVLKSESelAHQALQINssgsywMSaRERIQSQFVvpsckfpnefqslsaksslnnEKTNDLAIII 644  Saccharomyces...
CCK70349      591 L--LSkpYIHYFEKGILTSGSpyALEALRINssgsywMSaRERITSQFVvskkafpdqf--kllksgnrsSGKDDLGIIL 666  Kazachstania ...
EGY14736      504 P--MAksYLSYFENGTLSSEYsyAKEALEMNascsywISaRDRIKSQMVvyeedvan------eemeggiKNKNTQGFIL 575  Verticillium ...
EME47542      559 P--LAkgYLKFFESGTLSSEYeyAKEALEMNascsywISaRDRIMSQMVvyene-----------slkavGDHSDIGYIL 625  Dothistroma s...
XP_002584305  599 P--VAkgYLQYFEGGKLSSQFalAKEALEMNascsywISaRDRIARQIVvydkdvrr-----lsgdeipqNRSSHLGFIL 671  Uncinocarpus ...
EPS32455      599 P--LGkgYMQYFERGVLSSQFelAKEALEMNascsywISaRDRIMGQMVvyqdqmk-------niqtdvkLTEGRLGFIL 669  Penicillium o...
CCG81108      572 P--LAkaFDTHFENGIMSSEFplAKEALKMNamcsywISsRDRIMSQMVvwqknlk-------tphemkvMGLQGTGIIL 642  Taphrina defo...
5DKU_A        380 SEKPNLQQIp-RQ-----------K--NI----REIFIPNDnniFIIADFKQIELKIaAEITNDEIML----KAY----- 432  Plasmodium fa...
XP_003646670  649 PRVIPMGTVtrRAventwltasnaKknRIgselKTKVIAPEgysFVGADVDSEELWI-ASLVGDSVFNihggTAIgwmcl 727  Eremothecium ...
CCE94246      664 PTVIPMGTVtrRAventwltasnaKsnRIgselKAQIEAPKgycFVGADVDSEELWI-ASLVSDSVFNihggTAIgwmcl 742  Torulaspora d...
P15801        645 PKIVPMGTItrRAvenawltasnaKanRIgselKTQVKAPPgycFVGADVDSEELWI-ASLVGDSIFNvhggTAIgwmcl 723  Saccharomyces...
CCK70349      667 PQIIPMGTVtrRAventwltasnaKanRIgselKAQVKAPDgycFVGADVDSEELWI-ASLVGDSVFNlhggTAMgwmcl 745  Kazachstania ...
EGY14736      576 PQIIPMGTItrRAventwltasnaKknRVgselKAMVKAPPgysFVGADVDSQELWI-ASLVGDATFKlhggNAIgfmtl 654  Verticillium ...
EME47542      626 PQVIPMGTItrRAventwltasnaKknRVgselKSMITAPPgycFVGADVDSQELWI-ASLVGDASFKlhggNAIgfmtl 704  Dothistroma s...
XP_002584305  672 PQIIPMGTItrRAventwltasnaKanRVgselKAMVKAPPgyaFVGADVDSEELWI-ASLVGDAQFQihggNAIgfmtl 750  Uncinocarpus ...
EPS32455      670 PQVIPMGTItrRAventwltasnaKsnRVgselKAMIKAPPghvFVGADVDSQELWI-ASLVGDAPFQlhggNAIgfmtl 748  Penicillium o...
CCG81108      643 PQTVAMGTItrRAteatwmtasnaKskRVgselKSMVKAPPgycFVGADVDSEELWI-ASLMGDAQFQahgaTALgwmtl 721  Taphrina defo...
5DKU_A        433 ---NN-NIDLHTLTASIITKKnipdinkedRHIAKAINFGLIYGMNYVNLKNYA--N---TyyglnmSLDQCLYFYNSFF 503  Plasmodium fa...
XP_003646670  728 egtKSaGTDMHTKTANILGCS---------RDEAKIFNYGRIYGAGVRFATQMLkkFnpsL------TAIEAKETAEKLY 792  Eremothecium ...
CCE94246      743 egsKNeGTDLHTKTAQILGCS---------RSEAKIFNYGRIYGAGVKFAAQLLkkFnpsL------PDEEAKSIANKLY 807  Torulaspora d...
P15801        724 egtKNeGTDLHTKTAQILGCS---------RNEAKIFNYGRIYGAGAKFASQLLkrFnpsL------TDEETKKIANKLY 788  Saccharomyces...
CCK70349      746 egtKHeGTDLHTKTAKILGCS---------RNEAKIFNYGRIYGAGVKFAGQLLkkFsptL------TETGAKNTAVSLY 810  Kazachstania ...
EGY14736      655 egtKAaGTDLHSRTAGILGIT---------RNDAKVFNYGRIYGAGLKFAAQLLrqFdpnL------SEKETLETASKLY 719  Verticillium ...
EME47542      705 egtKGaGTDLHSRTAKILDIS---------RNDAKVFNYGRIYGAGLKFAQSLLrqFnptL------KEEDAKMIATNLY 769  Dothistroma s...
XP_002584305  751 egtKAaGTDLHSKTAKILGIS---------RNNAKVFNYGRIYGAGLKFAATLLrqFnpsI------SEEETKLIASNLY 815  Uncinocarpus ...
EPS32455      749 egsKAaGTDLHSRSASILGIS---------RNDAKVFNYGRIYGAGVKFAATLLrqFnpsL------TEKQTQETAANLY 813  Penicillium o...
CCG81108      722 egsKNnGTDLHSKTASILGIS---------RGNAKIFNYGRIYGAGLKFAIQLLqqFnpqL------TEARAKETAERLY 786  Taphrina defo...
5DKU_A        504 EHYKGIY-----------------KWHNQVKQKRALQyS---TLSNRKVIFPYfSF---------TKALNYPVQGTCADI 554  Plasmodium fa...
XP_003646670  793 ESTKGLAwrsskfpk--fwyggseSLVFNRLELIAQQdEpltPVLGAGITSSL-IKknlfkntylTSRINWTIQSSGVDY 869  Eremothecium ...
CCE94246      808 ESTKGKTktskifkk--fwyggseSILFNKLESIAEQdEpktPVLGCGITFSL-MKknlgtssflPSRINWAIQSSGVDY 884  Torulaspora d...
P15801        789 ENTKGKTkrsklfkk--fwyggseSILFNKLESIAEQeTpktPVLGCGITYSL-MKknlransflPSRINWAIQSSGVDY 865  Saccharomyces...
CCK70349      811 ENTKGKSkrskvfqk--fwyggseSIVFNKLENIAEQdQprtPVLGCSITSSL-MKqnlkansflPSRINWVIQSSGVDY 887  Kazachstania ...
EGY14736      720 VNTKGTKtnrkvlhkrpfwrggteSFVFNKLEEFAEQeRprtPVLGAGITEAL-MGrfiskggylTSRINWAIQSSGVDY 798  Verticillium ...
EME47542      770 QETKGTSttkkllherkfwrggteSFVFNKLEEFAEQeRprtPVLGAGITEAL-MRryiskggfmTSRINWAIQSSGVDY 848  Dothistroma s...
XP_002584305  816 RETKGTRtmrkmisespfwrggteSFVFNKLEEFADQeRprtPVLGAGITEAL-MRrfinkgsfmTSRINWAIQSSGVDY 894  Uncinocarpus ...
EPS32455      814 KETKGTRtsrralretpfwrggteSFVFNKLEEFADQeRprtPALGAGITEAL-MRrfinkgsfmTSRINWAIQSSGVDY 892  Penicillium o...
CCG81108      787 EATKGSKskikalgkkgfwrggteSYVFNRLEAMAELdQprtPVLGCRITQAL-QAkylspgaflTSRVNWAIQSSGVDY 865  Taphrina defo...
5DKU_A        555 LKLALVDLYDNLKDIN--GKIILCVHDEIIIEVNKKFQEEAL------KILVQSMensasyflkKVKCEVSVKIA-ENWG 625  Plasmodium fa...
XP_003646670  870 LHLLFCSMHYLIIKYKlkARLCISIHDELRFLVADEHKYKAAmalqiaNLWTRAVfceq-mgieDLPQGCAFFSSvDIDK 948  Eremothecium ...
CCE94246      885 LHLLSCSMHYLISKYNinARLSISIHDEIRFLVAEEDKYRAAmalqvsNIWTRAIfceq-mgidDLPQNCAFFSLvDIDH 963  Torulaspora d...
P15801        866 LHLLCCSMEYIIKKYNleARLCISIHDEIRFLVSEKDKYRAAmalqisNIWTRAMfcqq-mginELPQNCAFFSQvDIDS 944  Saccharomyces...
CCK70349      888 LHLLCCSMNYLIAKYGlrARFCISIHDEIRYLAAEEDKYRVAlalqisNLWTRAIfceq-igidDLPQNCAFFSAvDIDT 966  Kazachstania ...
EGY14736      799 LHLLIVSMDYLTRRFNidARLAITVHDEIRYLVKDDDKYRAAmalqvaNVWTRAMfaqq-vginDLPQSCAYFSAiDIDH 877  Verticillium ...
EME47542      849 LHLLIVSMEYLCKRYNinARLALTVHDEIRYLAKNEDKYRSAmalqvaNVWTRAMfsqq-mgidDLPQSCAYFSAvDIDH 927  Dothistroma s...
XP_002584305  895 LHLLIVSMDFLIRRFNidARLAISVHDEIRYLVKEEDKYRAAmalqvaNVWTRAMfsqq-mgidDLPQSCAYFSAvDIDH 973  Uncinocarpus ...
EPS32455      893 LHLLIVSMDYLIRRFNiqARLAITVHDEIRYLVKEEDKYRAAlalqisNVWTRAIfsqq-vgidDLPQSCAYFSAvDIDH 971  Penicillium o...
CCG81108      866 LHLLITSMEYLIKVFDlnARISITVHDEIRYLVATKDRYLAAyalqvsNLWTRAMfsqq-mginDLPQSCAFFSEvDIDH 944  Taphrina defo...
5DKU_A        626 S 626  Plasmodium falciparum 3D7
XP_003646670  949 V 949  Eremothecium cymbalariae DBVPG#7215
CCE94246      964 V 964  Torulaspora delbrueckii
P15801        945 V 945  Saccharomyces cerevisiae S288C
CCK70349      967 V 967  Kazachstania naganishii CBS 8797
EGY14736      878 V 878  Verticillium dahliae VdLs.17
EME47542      928 V 928  Dothistroma septosporum NZE10
XP_002584305  974 V 974  Uncinocarpus reesii 1704
EPS32455      972 V 972  Penicillium oxalicum 114-2
CCG81108      945 V 945  Taphrina deformans PYCC 5710
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