3PRU,3NPH,2L3W,2KY4


Conserved Protein Domain Family
PBS_linker_poly

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pfam00427: PBS_linker_poly 
Click on image for an interactive view with Cn3D
Phycobilisome Linker polypeptide
Statistics
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PSSM-Id: 425675
Aligned: 196 rows
Threshold Bit Score: 104.059
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3PRU_C               15 FSLDDAKXVIRAVYRQVLGNDYIXDSER---LKGAESLLTNGSISVREFVRTVAKSELYKKKFLYNNFQTRVIELNYKHL 91   Synecho...
jgi:Cyagr_3075      901 PSETQVQEVVQAVYRQLLNRV-PFAAER---QVDPESQLRDGQLSVAEFVAQIAGSDLFQQRL-QRMAPLRAASAAYLAL 975  Cyanobi...
CAK24451            824 PSESELREVADATYRQLLNRV-PLESER---LITSESRLRDGQIDLEGFVAAVATSEAFMERL-SKMAPLRAATAAAMAL 898  Synecho...
Q2JNU5                8 QDPQTLQNLLRAAYQQLLERQ-PYQHEKtgeLEKIEQDFLRGRIGIKRLVRQIGGSRLYRQLFFSAGCNTRCVEQGFKHF 86   Synecho...
BAI89944             13 ASVEERTFVLSKIYQQVLERQ-PYDSERk-qLWDLERDFKKGKLGIRHFLKSLVVRPVYLEHFYENSSNLKFIENACKHF 90   Arthros...
jgi:Oscil6304_5442   13 ASLAEREGVLQQIYHQVLERQ-PYQFERk-kLAGLEKEFIKGKIGIRHFLKSIAVSSIYLESFYEKSSNVKFIENAFKHF 90   Oscilla...
jgi:Pse7367_1980     12 STKAEREAALIQVYRQVLERQ-PYEFERr-lLVKLEKDFLKGKLGVRHFIRELAASSVYLDNFYFNTSTPKFIEFCFKHF 89   Pseudan...
WP_015170777         12 ASVEERQAALRQIYTQVLERQ-PYAHERr-iLAKAEQDFLKDKIGVRRFLMELARSEVYLNSFYHRVSNLKFIEWCFKHF 89   Geitler...
WP_009768692         13 STLEERQTALRYIYYQVLERQ-PYVFERk-lLAKAEKDFLNDKSGVRRFLKELGHSQVYLDSFYHNSSNMKFLELCFKHF 90   Oscilla...
WP_011932419         33 QSTSSRDLLIEKAYRQIYF--HAMKHDR---DTCLESQFRAGSITMRDFVRQLLLSERFQQSYYQCNSNYRMVDQVIGRV 107  Synecho...
3PRU_C               92 LGRAPFSEDEVIFHLDLYENQGFDADIDSYIDSVEYQENFGENIVPYY 139  Synechocystis sp. PCC 6803
jgi:Cyagr_3075      976 LGRAAMP-AEVSRFLATRATAGQQAAVAELLNAREYATAFGQDTVPYL 1022 Cyanobium gracile PCC 6307
CAK24451            899 VGRASTP-AETSRFLIVRAESGQCAAVQELLDLRSKLG-FESSEVPGl 944  Synechococcus sp. WH 7803
Q2JNU5               87 LGRAPASKEEVAAYHDILVHQGLQAMVNAFIDSEEYRHQFGNDHLPHP 134  Synechococcus sp. JA-2-3B'a(2-13)
BAI89944             91 LGRTPHGDEEIHNWDNILLRHGVGALVSDMVDSEEYRKCFGYFTVPYW 138  Arthrospira platensis NIES-39
jgi:Oscil6304_5442   91 LGRSPHDEAEIRECDWLLVEHGVGAMVSALIDSEEYRKMYGSLTVPYw 138  Oscillatoria acuminata PCC 6304
jgi:Pse7367_1980     90 LGRAPVDHQEMQSYAIIFAQSGTNGVISAILGSDEYAKAFGCFTIPHP 137  Pseudanabaena sp. PCC 7367
WP_015170777         90 LGRAPMDQNEVREYCNILMHKGAEKCIAAILDSEEYRKEFGCFTVPYP 137  Geitlerinema sp. PCC 7407
WP_009768692         91 LGRAPVDQEEIKVYCEILMHKGVAQCITAILDSEEYRKTFGCFTVPYP 138  Oscillatoriales cyanobacterium C42_A202...
WP_011932419        108 LGRSVHNDGERRAWSIVIGEKGFTAFVDALLESDEYMNNFGYDRVPEQ 155  Synechococcus sp. WH 7803
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