4C3O,3USE,3RGW,6EHQ,1YQ9,1E3D


Conserved Protein Domain Family
NiFeSe_Hases

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pfam00374: NiFeSe_Hases (This model is not part of the current CDD release)
Nickel-dependent hydrogenase
Statistics
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PSSM-Id: 513396
Aligned: 133 rows
Threshold Bit Score: 524.005
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4C3O_A        54 RGLEVILKGRDPRDAWAFVERICGVCTGTHALTSIRAVENALGIAIPDNANCIRNMMQATLHVHDHLVHFYHLHALDWVD 133 Salmonella ente...
Q24VQ3        39 RGIEQILQGRDPRDAVYITERVCGVCMASHGWTSAMAIEDAQGANVPRAAQLIRNLIAGSLWLHDHPLHFYHLSALDYLD 118 Desulfitobacter...
WP_013119172  39 RGWEVLLQGKDPRDATYVTERVCGVCAGSHGWGSSLALDDAFGAQVPDAGRILRNLMLGAMWLHDHPLHFYHLCALDYID 118 Thermincola potens
WP_015043894  40 RGLENLVIGRDPRDASYVTERACGVCSTVHGLASALALDAAFGAEVPYGGRLIRNLIYGATLLHDHPLHFYHLSALDYLD 119 unclassified De...
Q24X55        38 RGFEPLLRGRDPRDATYVTERTCGVCAGSHGWASSLALDQAFGAKVPTGGRLIRNLMIGAMWLHDHPLHFYHLSALDYLD 117 Desulfitobacter...
WP_013162909  44 RGLEKALIGYDARVAQQVTQRVCGVCPYAHAEAAALALEDAMGIRPNANGQLLRNLITGAYLVHDSLLHFYQLSALDFID 123 Desulfurivibrio...
WP_013162757  37 RGFEIFLRGRDPLDSQQITQRICGVCPYAHAIASSTAQENAYRLQVPPNGRILHNLIQGANHLYDYLLHFYQLCALDYVD 116 Desulfurivibrio...
WP_004072606  37 RGFEVFLLGRDPLDAQQITQRICGVCPYAHAIASSYAQEAAYRLRTPPNGRILHNLIQGANHLYDYLLHFYQLSALDFID 116 Desulfobacter p...
WP_014959255  37 RGFEAFLRGRDPLDAQQITQRICGVCCYAHAVASSYAQESAYNLSVPPNGRILHNLIQGANHLYDYLLHFYQLSALDFVD 116 Desulfobacula t...
Q6ARY7        39 RGFEQILQGRSPLDAQQIVQRICGVCPVSHGIASVLAQEQAYGIQLPENARLQRNIMLASNYIQSHITHFYHLSALDFID 118 Desulfotalea ps...
4C3O_A       134 VVAALKAdphqtsaiaqslsawpLSSPGYFRDLQNRLKRFIESGq---LGPFRNGYwGHPAMK-LPPEANLLAVAHYLEA 209 Salmonella ente...
Q24VQ3       119 VLAVNHY----------------QGNVAELLAVKNKIMSLVTAGd---TAPLTPRY-QPDSYSvRDPEIVTTALAHYLEA 178 Desulfitobacter...
WP_013119172 119 VMAVANY----------------KGNDPGLLAVKDKIVKLVQAGd---AAPLTPRY-EPDQYCvNDPELATVAVSHYLKA 178 Thermincola potens
WP_015043894 120 VMAIAQY----------------KGNDAGLNGVKDKILKLVAANd---TAPLTPRY-NPDQYCvSDPELVTMAVAHYLKA 179 unclassified De...
Q24X55       118 ITAVAKY----------------QGQDPGLLRVKDKISKLIAAGd---TAPLTPRY-EPDAFCvNDPELVTLAVSHYLHA 177 Desulfitobacter...
WP_013162909 124 IEAVLAY----------------KGGDPVLAAVRQWVEEEVRSSrifpGAPFLPRY-RHDDQLpGDTD-SLLLVRNYFAN 185 Desulfurivibrio...
WP_013162757 117 ITAVLEY----------------TGKDRELSKVRDWVKAEIDSGkrypAAPFLPRL-SGKYLD--NRDANLGAIKNYLEA 177 Desulfurivibrio...
WP_004072606 117 VTAITGY----------------TGKDRDLTHLKEWVNHALGSGdshpAAPFLPRL-SGTYVT--DADINITALKHYVES 177 Desulfobacter p...
WP_014959255 117 VTAILEY----------------KGSDSDLTVLRDWVKTELNSKtafpAAPFLPRL-SGRYLS--DAQVNIGALKHYIES 177 Desulfobacula t...
Q6ARY7       119 ITAILDY----------------KGGDAFLLAMQNWVKAELASKnlfpAAPFLPRY-QGRYLK--DVDFNITALRNYFIA 179 Desulfotalea ps...
4C3O_A       210 LDFQKEIVKIHTVFGGKNPHPN-WLVGGVPCAinldetgavgaVNMERLNLVSSIIQKARQFCEQVYLPDVLLIASYYK- 287 Salmonella ente...
Q24VQ3       179 LKIQGKAKKMSAVLGGKQPHQSsIVVGGVTIY-----------PRKEQLEAFRTLLNEVVSFAELTYVPDVVSFCTG-Pl 246 Desulfitobacter...
WP_013119172 179 LEMQAKAKKMSALFGGKQPHQSsIIVGGVTCY-----------PNPQLVAQFRSLLMEQIEYLENIYYKDVIAFGTG-Pl 246 Thermincola potens
WP_015043894 180 LEMQAKAKKMSAIFAGKQPHQSsIVVGGVTIL-----------PTLEQVFQYRSMLMEQIAFVENVYLQDVLTFGTG-Pl 247 unclassified De...
Q24X55       178 LNMQAKAKKMSALFAGKQPHQSsIVAGGVTML-----------PNIEVVEQFRSMLLEQIDYLENIYLQDVLTFGTG-Pl 245 Desulfitobacter...
WP_013162909 186 FTLLADLQKMVAIFGGKAPHPVaIEAGGVTTR-----------PTLGMLAQYRTLLRRAEAFVLGPYREDIFSVCRAFP- 253 Desulfurivibrio...
WP_013162757 178 MKMEQKANQAAAIFGGKFPHATaIFPGGCTQE-----------ARVDLIVPYQSLIREVRDFIHHKYIPDVLAVAGAFP- 245 Desulfurivibrio...
WP_004072606 178 LEIQKKANRASAIFGGRFPHATgIFPGGCTRP-----------PDIDAISSYQALIHEVKHFIHHKYLPDLLAVAGAFP- 245 Desulfobacter p...
WP_014959255 178 LEIQKKANRASAIFGGKFPHATaIFPGGCTQS-----------PTIDNIASYRSLIFEVRNFIHQKYIPDILAVAKEFP- 245 Desulfobacula t...
Q6ARY7       180 LEMRATAHQLIAIFAGKMPHMAsIVPGGITEK-----------VTTKKIIQCKSKLAQLKGFINNSYRNDLLAITAEFP- 247 Desulfotalea ps...
4C3O_A       288 -DWAKIggGLSsmNLLAYGEF---PDNPND-YSasNLLLPRGAIingrfdEIHPVDltaPDEIQEFVTHSWYTygngnnD 362 Salmonella ente...
Q24VQ3       247 lELGKAgvGAGpgGYIAYGGF---PMDDSGiEK----LFKGGFIsseapgVVEALD---MSRITESVASAWYK------- 309 Desulfitobacter...
WP_013119172 247 lPLAQSglGGGkpNYLAFGGF---PQDSEGkDL----FFKRGLIlngnlsQVMEVD---IDKITEEAKYAWYA------- 309 Thermincola potens
WP_015043894 248 lPLAQAgvGGShgNYMSYGGF---AGDAEGkDL----LFTPGIVldnnfgTIHELN---SGKITEDITHAWYK------- 310 unclassified De...
Q24X55       246 lPLAQAgvGGGygNFLAYGGF---GLDDEGkDF----LFKQGIVldgnlsNVMPVD---QSKITEGVTHAWYK------- 308 Desulfitobacter...
WP_013162909 254 ---HYFqeGRGygNFLSFPFL---PEADGd-----NHLFAGGALln---gEHQPLE---LDAINEDHTYAFYR------Q 310 Desulfurivibrio...
WP_013162757 246 ---EYWdiGRSqgGFLSYGHLplgPEPDSRr------LLAPGVMfd---gQVEAVD---FNQIRQDVGNAKYS------- 303 Desulfurivibrio...
WP_004072606 246 ---EYWhiGQSkgGFMSYGLLpfgPEPDSPr------LLSPGVLid---gKVETVK---TGAITEDVKFAKYS------- 303 Desulfobacter p...
WP_014959255 246 ---DYWniGKSrgGFLSYGLLplgPQLDSKr------LFAPGVLfq---dNFARVD---FDAIQEDVKYSKYS------- 303 Desulfobacula t...
Q6ARY7       248 ---SYLsiGKScgNFLSFGAFgdaNLEKSP-------LLPAGALlq---gKLEEVD---DISIKEDVSFSKYS------- 304 Desulfotalea ps...
4C3O_A       363 KG---LHPWDGL---TEPqlvmgeHYkgtktfieqvdE-----------SAKYSWIKSPRWKGHAMEVGPLARYLIGYHQ 425 Salmonella ente...
Q24VQ3       310 -EgepAHPWAGE---TVIdf---------------------------dkKGAYTFIKSPRYKGETAEVGPLARMLVMQH- 357 Desulfitobacter...
WP_013119172 310 -VeepLTPLKGN---TEHkl---------------------------dkPDAYSFIKAPRYDGEILEVGPLARMMVMQP- 357 Thermincola potens
WP_015043894 311 -SdkgRTPYEED---TVIdl---------------------------dkKDAYTYVKAPRYDGKPMEVGPLARMLVMQP- 358 unclassified De...
Q24X55       309 DNpngDHPYDSD---TVPdl---------------------------akKDAYSFVKAPRYDGKPIEVGPLARMLVMQP- 357 Desulfitobacter...
WP_013162909 311 QSgtaLPPLATS---RLT------PL-----------DwqefqreeqrkGGKYSWSRAPRYRGEVMEVGAAARIVNSYHQ 370 Desulfurivibrio...
WP_013162757 304 -SpsnLRVRDAA---ITPqp---------------------------nkRDAYSWIMAPRYAGQVVEVGPAARVMVDYAQ 352 Desulfurivibrio...
WP_004072606 304 -SpsgLKVTQGR---LTPap---------------------------hkEGAYSWVKAPRYGGHVLEVGPAARILVDYLQ 352 Desulfobacter p...
WP_014959255 304 -SpsgLKVRNGE---LTPss---------------------------hkTGAYSWVKAPRYQEKMVEVGPAARILVDYHQ 352 Desulfobacula t...
Q6ARY7       305 --------SDSGrekTVPep---------------------------hkSGAYSWIKAPRYRGEAMEVGPLARLMVAQAK 349 Desulfotalea ps...
4C3O_A       426 N-KPEFKEPVDQLLSVLKLPKEALFSTLGRTAARALESVWAGNTLQYFFDRLMRNLKSGdTATANVTLWEPDTWP-TsAK 503 Salmonella ente...
Q24VQ3       358 ------SGLLD-LMGRYGIKP----GAVARHLARAQETLLITKSMYRWLDDLETLLGSK-TVRPDIHDSKHWDPPaQ-GQ 424 Desulfitobacter...
WP_013119172 358 ------KAFMD-LVEKYKIKP----GVVARHAARAVETIMLAHKMVEWLDELESLMNRG---EVRIHDTAHWEVPeS-AQ 422 Thermincola potens
WP_015043894 359 ------KVLMD-VITKYNIKP----GAVARHAARAVETILMAKKMLEWVDSLIAEMGKP---NFKIHDTDHWEIPaS-GQ 423 unclassified De...
Q24X55       358 ------QGLMD-IIAKYNIKP----GAVARHAARAFETVILAKEMINWVNQLEAEMGKG----LRIHDTEHWNPPaT-GQ 421 Desulfitobacter...
WP_013162909 371 GgNQALKELVDHTNRELGITVADYNSVMGRHLSRYLSAALIIGRLKEQLEMVKDGVLGF----------EEREVPrN-AR 439 Desulfurivibrio...
WP_013162757 353 GhNPEIKKLVDRFAGQAGIQPTQLNSVLGRHLSRAILAAVLADFLLAESQRLQPGQPTM----------ASIDPPaS-AE 421 Desulfurivibrio...
WP_004072606 353 GgNETVKQLVDRFAGMADIRPEQLNSVLGRHLCRAVSAVVIADFLLDQTEQINPSAPFI----------PEIKIPeA-GE 421 Desulfobacter p...
WP_014959255 353 NnNPKIKQLVDKFAGLAGIKAENLNSVLGRHLCRAISAAVIADFLLEETERIDLKGQHM----------AQYNLPkS-GE 421 Desulfobacula t...
Q6ARY7       350 G-NKKMQEASNAFLQKTDLSLTDLDSCLGRHIARFIELEVIIEKCEEWMEQLRPDQPTA----------VDFNIPqQ-AE 417 Desulfotalea ps...
4C3O_A       504 GVGFSEAPRGALGHWIKI-ANQKIDSYQCVVPTTWNAGPRDDKGQIGAYEAALMGTKLAVPDQPLEILRTLHSFDPCLAC 582 Salmonella ente...
Q24VQ3       425 GAALNEAPRGALGHWLKI-DQHVISNYQMVVPTTWNISPRDEKNIPGPVEQALIGVPV-DPDNPVNVVRVIRSFDPCLAC 502 Desulfitobacter...
WP_013119172 423 GAGLLEAPRGALAHYIDI-KDKKVANYQMVVPSTWNLSPRDNKGNRGPVEEALIGVPVPDPKNPINLARVIRSFDPCISC 501 Thermincola potens
WP_015043894 424 GAGLIEVARGSLGHWIKV-EDHKTANYQMVVPSTWNFSPTDGNGVLGPVDKSMIGVPVPDPDNPINVVRVIRSYDPCLAC 502 unclassified De...
Q24X55       422 GIGLTEVPRGALGHWIKI-KDHVTENYQMVVPTTWNFSPKDAQGNYGPLEKALIGVPIPDENNPINIVRVIRSYDPCLAC 500 Desulfitobacter...
WP_013162909 440 GVGITEASRGALGHWLETdKDGLIKNYELVVPSTWNFGPKDAAGKPGAVEKMLLGTRISNPEQPLEAARIARSADPCIAC 519 Desulfurivibrio...
WP_013162757 422 GFGATEASRGALLHYIRI-ENYKIAKYECVVPTTWNASPRDDQGQPGAMESALIGTRVNNPEEQIESKRIVRSFDPCLAC 500 Desulfurivibrio...
WP_004072606 422 GFGLTEASRGALLHYIRI-RNYKIDHYECVVPTTWNCSPRDDTGRPGALESALIGTRVEDPAQQIEANRIVHSFDPCLAC 500 Desulfobacter p...
WP_014959255 422 GFGATEASRGALLHYIKV-KDYKIKKYECVVPTTWNCSPKDDNDQPGALESALIGTRVENPDEQIEANRIVHSFDPCLAC 500 Desulfobacula t...
Q6ARY7       418 GRGMMEAPRGALGHWVTI-EKQKIGRYECIVPTTWNCSPKDDKQIPGPVEQSLIGTIVADKTNPLEAARIVRSYDPCLAC 496 Desulfotalea ps...
4C3O_A       583 STH 585 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Q24VQ3       503 AVH 505 Desulfitobacterium hafniense Y51
WP_013119172 502 AVH 504 Thermincola potens
WP_015043894 503 AIH 505 unclassified Dehalobacter
Q24X55       501 AIH 503 Desulfitobacterium hafniense Y51
WP_013162909 520 SVH 522 Desulfurivibrio alkaliphilus
WP_013162757 501 AVH 503 Desulfurivibrio alkaliphilus
WP_004072606 501 AVH 503 Desulfobacter postgatei
WP_014959255 501 AVH 503 Desulfobacula toluolica
Q6ARY7       497 AVH 499 Desulfotalea psychrophila
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