5NEM,8VSD,7P2D,3V4V,7UH8


Conserved Protein Domain Family
Integrin_beta

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pfam00362: Integrin_beta (This model is not part of the current CDD release)
Integrin beta chain VWA domain
Integrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer. This domain corresponds to the integrin beta VWA domain.
Statistics
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PSSM-Id: 513386
Aligned: 98 rows
Threshold Bit Score: 304.818
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5NEM_B       108 EDYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEI-ANPCSSipyFC--- 183 human
XP_032510553 116 QNYPVDLYFLLDGSASMASVKNEIVKQTESIYQMMKSMTDNVYLGMGSFVDKNLLPFTN-----VlNS------------ 178
EFX68653     123 KDYPIDLYFLMDLSNSMADDKASVEKLGSKLADTMRNITRFFSMGFGSFVDKNRFPYSW---------PE---------- 183
EFN82868     137 KNYPLDLYYLMDLTWSMKDDKETLVGLGCRMANTLGTFTTNFRLGFGSYADKPLMPYIF--PGHE-ENPCKS---EHafc 210
2_pfamImport   2 KNYPLDLYYLMDLTWSMKDDKETLVSLGGDMSRRIGKFTNKYRLGFGSYADKPVMPYIL--PGHE-KNPCVS---EHavc 75 
XP_002066889 129 RNNPLDLYVLMDLTWTMRDDKDTLEQLGTALTQTLHNLTDNYRLGFGSFADKPVMPLIS--HKWK-KNPCAA---ERatc 202
XP_002003308 130 GNNPLDLYVLMDLTWTMRDDKDTLEKLGAELTQTLRSLTDNYRLGFGSFADKPELPMIM--PQLR-KNPCAA---EResc 203
Q27591       131 RNNPLDLYVLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPMIL--PQHR-ENPCAA---ERatc 204 fruit fly
EDS40506     119 KHYPLDLYYLMDLTWSMKDDRDTLVNMGDQLAKALANLTENYRLGFGSFIDKPIMPFMQTEAHRQ-ANPCIS---ERevc 194
Q7PME7       135 KNYPLDMYYLMDLTWSMRDDKATLESMGSQLALALANLTANYQLGFGSFADKPAFPFIQSEPHRL-QNPCYS---ENdqc 210 Anopheles gambi...
5NEM_B       184 LPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAG 263 human
XP_032510553 179 TNTYSFRNRLKLINDPEAFKKTINDTAFGYNYDEQEGTLDALAQVIVCKEQIGWREESRKIILVFTGASFHAASDGIFGG 258
EFX68653     184 QKTYSFKNHMKIADNIALFTSEVQRAGIVNTYDEPEGGFEALVQAIVCTNEIGWREKARHIILLITDNYSHL-----LGG 258
EFN82868     211 TPLYSFWHHLELTDNIPRFIHEVNYSSVTGNVDNLEGGLDGVVQAIVCTQQVGWAHQARKLMLLATDGFLHFAGEGKLGG 290
2_pfamImport  76 SSIYSYWHHLRLTDDIQRFITKVNNSLVTGNADNLEGALDGIVQTIVCTEQVGWEHQARKIILVVTDGHLHFAGDGKLGG 155
XP_002066889 203 EPTYGYRHHLSLTDDIKAFTTAVAGSKITGNLDNVEGGFDALMQVIVCQKEIGWQQQARKVVILVTDGFMHFAGDGLLAG 282
XP_002003308 204 EPTYDYRHHLKLTEDVEAFTAAVAASKITGNLDNLEGGLDALMQVIVCPKQIGWKQQARKVVILVTDGFMHFAGDGLLAG 283
Q27591       205 EPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTKEIGWKEQARKVVILVTDGFMHLAGDGLLAG 284 fruit fly
EDS40506     195 EPTYGFRHRLQITKNTDKFIEKLKTSNVSANLDNLEGGLDALMQVLVCGDRIGWGENTRKIVILATNGYLHMAGDGLLAG 274
Q7PME7       211 EPTYGFKHRLKITRDIDSFIAQVKESNVTGNVDNLEAGLDALMQVLVCEKQIGWGSNTRKIVIVATDGWLHMAGDGLLAG 290 Anopheles gambi...
5NEM_B       264 IVCPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIP-GATVGLLQKDSGNILQL 342 human
XP_032510553 259 VVEPYDGKCYLE-NDVYSKETVMDYPSVGIINKLASEDEKIIIFAIDEEAKNIYKSLTNFIT-GSKVTKY--GGDLIANM 334
EFX68653     259 ILTPNDGKCHLN-GIDYGFGLLHDYPSLGQISRLVQELSMNIIFAVTADVAKAYQAFQPLVR-GSSVGVMSKDSSNVVTL 336
EFN82868     291 VVHRPDFQCHVDENGQYSLAKEYDYPSLAEVSRLLQERKVNLIFAVTEDRRHEYELIADLLKeHARVATLTRNSSNILEI 370
2_pfamImport 156 IVKRQDFKCHLDERQQYFLASEFDYASLAELSRLLQEHKINLIFAVTRDLLDEYEETVKLLReKARVAILTSDSSNILDI 235
XP_002066889 283 IVKRNDKKCHLSAAGEYTGSLEYDYPSLEEMYRELLRRKINVIFAVTEQVISTYHEMSVLMKeISNVEKLSADSSNILEL 362
XP_002003308 284 VTQRNDRQCHLNKAGEYTGSLTYDYPSLEEIYRELLRRKINVIFAVTEEVFSTYKELSGLMQeISNVEILSADSSNILEL 363
Q27591       285 IIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRKINVIFAVTEEVVSSYWELSALMKeISYVDILSADSSNILEL 364 fruit fly
EDS40506     275 ITERNDKQCHLSQEGEYTGTLQYDYPSLEEIYRVLVKSKTAVIFAVTDELQDYYRSLNDLMSeFTSVGALQDDSSNILQL 354
Q7PME7       291 IVEENDKQCHLDSDGNFVDALKYDYPSLEQIWRVLLRSKTAVIFAVTEAQQAYYRRLSDLMPeFTSVGRLQDDSSNIIQL 370 Anopheles gambi...
5NEM_B       343 IISAYEELRSEV 354 human
XP_032510553 335 LKTVYEEISQNL 346
EFX68653     337 VEEQYKLITSSV 348
EFN82868     371 IESSYHDIVSKV 382
2_pfamImport 236 IESSYHQITSKV 247
XP_002066889 363 IKKSYESFIKRT 374
XP_002003308 364 IKKSYESFIKRT 375
Q27591       365 IKKSYESLIKRT 376 fruit fly
EDS40506     355 VNTGYRDFVRKV 366
Q7PME7       371 VDEGYREFVKRV 382 Anopheles gambiae str. PEST
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