5E6R,4WJK,3V4P,5NEM,4UM9,3T3M,6OM2


Conserved Protein Domain Family
Integrin_beta

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pfam00362: Integrin_beta 
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Integrin beta chain VWA domain
Integrins have been found in animals and their homologs have also been found in cyanobacteria, probably due to horizontal gene transfer. This domain corresponds to the integrin beta VWA domain.
Statistics
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PSSM-Id: 425637
Aligned: 122 rows
Threshold Bit Score: 289.407
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5E6R_B        100 AKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNthpdklRNPCPNkEkecQPP 179 human
XP_005986370  136 AEGYPVDLYYLMDLSYSMKDDLQNVKSLGLGILNTLKNVTKSVKIGFGAFVDKTVLPYVSmvtaklKNPCPDrTetcQPP 215 coelacanth
11_pfamImport   1 AEGYPIDLYYLMDLSYSMKDDLENMKKLGSDIKKALHKLTVPCSAGFGCFVDKTVLPFVStvksklENPCPLrGekcQPP 80 
XP_015462612  124 AEGYPIDLYYLMDLSYSMKDDLEKIKNLGQNILNKLQEVTKSVRIGFGSFVDKEKLPYVSqvksrrEKPCPIrMdncQPA 203 Mexican tetra
XP_021327505  128 AQGYPIDLYYLMDLSYSMQDDLEQIKTLGQKILKKLKDITETVRIGFGSFVDKEMLPYVSqlpprrKNPCPNrIntcQEA 207 zebrafish
XP_003216768  135 AEGYPVDLYYLMDLSYSMKDDLENIKKLGSDLLAALRNITTSAKIGFGSFIDKTVLPYVStapskwQNPCPHvKescQSP 214 green anole
XP_022535914  129 AQGYPVDLYYLMDLSYSMNDDLKNVKTLGIELLNRLKQITGSARIGFGSFVDKTLLPFTDtneeklKKPCPPeEsecEPA 208 Mexican tetra
XP_686012     126 AEGYPVDLYYLMDLSYSMKDDLANVKNLGNDILEKLNRITGNARIGFGSFVDKTLLPYTDtneaklKHPCSDkNepcQPA 205 zebrafish
13_pfamImport   1 VEGYPVDLYYLMDLSYSMKDDLENVKELGKDLFAALKKITEHAQIGFGAFVDKTVLPYTNtnkeklLKPCDEnDqqcQAA 80 
3V4P_B        128 AEGYPVDLYYLMDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVStvpsklRHPCPTrLercQSP 207 human
5E6R_B        180 FAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRK-VTRLLVFATDDGFHFAGDGKLGAILT 258 human
XP_005986370  216 FSFRHVLALTDNATEFEVKVSQQKISGNLDSPEGGFDALMQAAVCENQIGWRN-VTRLLLYATDDTFHAAGDGKLGGIYR 294 coelacanth
11_pfamImport  81 FSYRHVLSLTSNLTLFQMRVSAENISGNLDMPEGGLDAMLQAAVCTDVIGWRN-VTRLLVFASDDVFHSAGDGKLAGIYL 159
XP_015462612  204 FTFQNVLPLTYSAREFKNEVSKQNISGNLDSPEAGLDAIMQAAVCQKEINWKN-VTRILVYTSDDTFHMAGDGRLSGIFR 282 Mexican tetra
XP_021327505  208 FMFQNVLPLTSDGREFEREVSKQKISGNLDSPEAGLDAIMQAAVCKDKIKWGN-VTRILVYTSDDTFHMAGDGRLGGAFL 286 zebrafish
XP_003216768  215 FSYQHVLPLTDNASEFESRVSQQRISGNLDDAEGGFDAIMQAAICKEQIGWRD-VTKLLVFTSDGAFHMAGDGKLGGAYM 293 green anole
XP_022535914  209 FGYKHVLSLTDNGEQFKNMVSQQRISGNLDAPEGSLDAIMQVVTCENEIGWGN-STRLLVLATDDGFHMAGDGKLAGILE 287 Mexican tetra
XP_686012     206 FGFQHVLPLTANGNDFKELVKQQHISGNLDPPEGSLDAIMQAAVCLKEIGWGN-STRLLVLATDDGFHMAGDGKLAAILE 284 zebrafish
13_pfamImport  81 FGYRHVLSMTPKEDDFKNKVTEQFISGNLDSPEGSLDAMMQAAICGDKIGWRNsSTRLIVLTTDAGFHMAGDGKLAGILE 160
3V4P_B        208 FSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRN-VSRLLVFTSDDTFHTAGDGKLGGIFM 286 human
5E6R_B        259 PNDGRCHLE-DNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNA 337 human
XP_005986370  295 PNDGRCHLNsEGEYSQSNVYDYPSVGHLVHALSAANIQPIFAVTASMIPVYQELSKLIPKSVVGELREDSSNIVNLTAEA 374 coelacanth
11_pfamImport 160 PADGHCHLNrNAEYSQSYLYDYPSVGHLVQVLTAANIQPIFAVTSSVVSTYKVGINGLPFIPNQVLLQQKVIPSIYVFIL 239
XP_015462612  283 PHDGQCHLSrDGFYDG-KTFDYPSIGHLSRVLQANNIQLIFAVTEKSVPAYKALSSLIPQSVVGVLEDDSSNVVQLISEA 361 Mexican tetra
XP_021327505  287 PHNGQCHFNdMGSYI-GKAYDYPSVGHVSRVLQDNNIQLIFAVTEEIYPAYKALSALIPQSVVGVLKKDSSNVVDLISEA 365 zebrafish
XP_003216768  294 PNDGHCHLDaNGLYTKNHLYDYPSVGHLAEVLSESNIQPIFAVTGSRLPMYEELSKLIPKSVVGELKEDSSNIVQLIVDS 373 green anole
XP_022535914  288 PNQESCQLDkKNMYSKSNLWDYPSVGQIARKLEEKNIQPIFAVTQKVADVYRELSKLIPKSDVGVLSGDSSNVVNLIVDA 367 Mexican tetra
XP_686012     285 PNKETCQLD-KNKYSKSNIWDYPSVGQVARKLEEQNIQPIFAVTKKMETVYTELSKLIPKSAVGVLSEDSNNVVNLIVEA 363 zebrafish
13_pfamImport 161 PNDEHCHMD-NNLYTNSAEMDYPSVGQLAVQLEKNNIQPIFAVTKNVEDVYKELSQMIPKSEVGVLSTDSKNVVKLIESA 239
3V4P_B        287 PSDGHCHLDsNGLYSRSTEFDYPSVGQVAQALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDA 366 human
5E6R_B        338 YNKLSSRV 345 human
XP_005986370  375 YNNLSSSI 382 coelacanth
11_pfamImport 240 LQNLSSTI 247
XP_015462612  362 YGNLSSTL 369 Mexican tetra
XP_021327505  366 YSNLSSTL 373 zebrafish
XP_003216768  374 YNSLSSTV 381 green anole
XP_022535914  368 YNKLSSNI 375 Mexican tetra
XP_686012     364 YNNLTSEV 371 zebrafish
13_pfamImport 240 YNRLSSKV 247
3V4P_B        367 YNSLSSTV 374 human
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