5JB3


Conserved Protein Domain Family
Ribosomal_S10

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pfam00338: Ribosomal_S10 
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Ribosomal protein S10p/S20e
This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.
Statistics
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PSSM-Id: 459769
Aligned: 343 rows
Threshold Bit Score: 41.3177
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5JB3_L           5 RIKIASTNVRSLDEVANQIKQIAERTGVRMSGPIPLPTKRIRITTRKSPDGEgSATFDRWELRVHKRLIDIeadeRAMRQ 84  Pyrococcus ab...
ELY75134         6 RLTLQSGDRAALDGIVEDIKTTAERKGAALKGPHSHPPEKLSVPQRCRLHADdDRHFDSWEYTVFTRELEI----HGHDD 81 
jgi:Hbor_18430   6 KLTFQSGNRYELEEQVSDLQEMLERKGAECKGPHASPPEQHTVPQYRNLEP--GDEFSSWNYTVYSRKLEI----HGNDH 79 
ADE02757         6 KLTFQSGDKAVLDRVVDDLKQFVERKGAECRGPHSDQPKQVSVPQYRTLQP--GDQFSSWTYPVYTRRLEI----HGADQ 79 
WP_014051781     6 TLTFQSGDKTALDETVKGLKDHVERKGAECKGPHQEQPKHHSVPLYSRCQS--GEQFEPWQYTVYTRWLEI----HGSDH 79  halophilic ar...
CCQ35913         6 TLTLQSGDRAVLERVVGNIKGCAERKGVELRGPHAESPFDVSVPQSKRLDSS-DRSFSYWTYTVYERRMEI----VGHDD 80 
WP_015764019     6 KLTLESGDRRRLDSVVDEIKEQAERKGVELKGPHPQPPDHLRVPQSKTLGPS-GGRFESWDYTVYTRTIEI----VDHEE 80  Halomicrobium
CCQ32881         2 TLTVESGDRYVLEDVVTEIKEAAEQKGVQLKGPHPQAPQELRVPQSADLSAD-GDRLDPWHYTVFTRTIEI----IGHDE 76 
Q5V488          34 TLTFTSGDRHRLEDTVTEIKQSAEQKGVELKGPHPKQPQELRIPQSKSLGPD-GGRFDSWTHTVYTRTIEI----VGYEE 108 Haloarcula ma...
WP_008416177     6 KLTLQSGDRAVLERVVSEIATAVERKGAEMKGPHPSPPETLRVPQHKRTTG--GETFDSWSYTVYTRTIEI----VGHDD 79  Halalkalicocc...
5JB3_L          85 IMR---IR-VPEDVTIEIE 99  Pyrococcus abyssi GE5
ELY75134        82 LARniaSQnFPDSVHIEAE 100
jgi:Hbor_18430  80 IARevgHMeFPESLHVEIE 98 
ADE02757        80 IARevgLReFPDGVHLEIE 98 
WP_014051781    80 IARevaGTdLSDAIHLEVA 98  halophilic archaeon DL31
CCQ35913        81 FARdvaGRaFPEGIRIDVD 99 
WP_015764019    81 FARavaGReFDDGIHVAAE 99  Halomicrobium
CCQ32881        77 FARdvtEWdFPERVHIGVS 95 
Q5V488         109 FARdvtQRtFPNAIHVEAG 127 Haloarcula marismortui
WP_008416177    80 VARgvmDRsLPEGVHLGVE 98  Halalkalicoccus jeotgali
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