6RFQ,6NBX,6CFW,3IAS


Conserved Protein Domain Family
Complex1_30kDa

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pfam00329: Complex1_30kDa 
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Respiratory-chain NADH dehydrogenase, 30 Kd subunit
Statistics
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PSSM-Id: 425611
Aligned: 559 rows
Threshold Bit Score: 55.5758
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6RFQ_G                98 LHVAPSAVIPVTTFLRD------------------NTS---TQYKSIIDIT-AVDyps--renRFEVVYNFLSVrh---n 150 Yarrowi...
Q609T9                34 cPVIPEDWGDAAEAAAAqgcrw----------aggwgEargESWVVNALLEkSGD--------------YLL-------- 81  Methylo...
WP_015282015          35 lrLAPPDWGTAAQIAAGlglrwa------glwgdpQVEtgeETLVVQACLVrDGD--------------YLV-------- 86  Thiofla...
jgi:Thivi_2909        72 LVLDPEDWAAAAKLAAGmgmrhaglwsdpletevsEAEieePCLRVRACLEqAGD--------------YLV-------- 129 Thiocys...
jgi:Slit_2560         22 gEIGPDDLHEICRQVHDg----------------------gGRLVALW----GSDtrqqdrgfQLHVLLLNE-------- 67  Siderox...
BAL23802              22 ADVDAAQWSALALAVAEe----------------------kGRLVSLW----GSDeratgdgfTVSAAYATA-------- 67  Azoarcu...
Q13II9                26 ARVDAHTWTRTAGTVRDa----------------------gGRLISVWGTEeAADr------fVISAAYALE-------- 69  Parabur...
UNSW:PCNPT3_12255     41 ITVKDTALIEVMKWLYF-------------------EK---DG--WLSVSF-GNDert--lsgYFAVYHTLSMEgdekcw 93  Psychro...
jgi:Desaci_0326       73 LEVPLERIKEICSYIQE------------------------IGY-PLVLMF-ANDeqn--fqaGYAVNYVFAaree-gml 123 Desulfo...
EdlabUofT:DCF50_p761  61 LKTASESVPGICAYLNK------------------------ELDYPLVLMF-ANDeqs--qnsCFGVYYVFAdrqe-all 112 Dehalob...
6RFQ_G               151 SRIR-LKTyatE--V---TP-VPSITCLYEGANWFEREAYDMYGVFFE--------GHPDLRRIMT----DYG-F---EG 207 Yarrowi...
Q609T9                82 -----LRTvl--ppG---RTgLPSHTPHFPGAARPERHTRDLLGLKFI--------GHPDDRRWVRhqawGEReF----- 138 Methylo...
WP_015282015          87 -----LATev--saA---KPeLASHTPFFAGADRLERHAQDLLGLRFT--------DHPDPRRWTRhqawPEDaH----- 143 Thiofla...
jgi:Thivi_2909       130 -----IETdv--plN---RPlLGSQTPAYPGLDRLERHAHDLTGVVFTghpfdsaqDRPDERRWTRhqawPADrF----- 194 Thiocys...
jgi:Slit_2560         68 TGMVcLNVql--saE---QPvYPDISQIFPAASRMQRATYDMLGIYAQ--------EGHDHRKWVRhgawHSGsF----- 129 Siderox...
BAL23802              68 DGLLwAKLg-lD--Pa--RPtYPDIARLFAPAIRMQRAARDLVGIEPE--------DADDMRPWLRhgawPADyF----- 129 Azoarcu...
Q13II9                70 DGILwLQLp-aDdrHesgGYgYPDLSAVFPCATRMQRAVYDLLGLRAI--------GAEDTRPWLNhgnwAADyH----- 135 Parabur...
UNSW:PCNPT3_12255     94 IMVK-IHVd----aE---TKeFPSITPVIPAAVWGEREIRDMFGLRPI--------GLPDQRRLVL----PDD-WpedLH 152 Psychro...
jgi:Desaci_0326      124 LVIK-TKVd----pE---TMeIPSISNQVHAASGYEREIQDLFGIVPV--------GHPDGKRLVF----HSN-WpqgAY 182 Desulfo...
EdlabUofT:DCF50_p761 113 VVVK-TSVs----pD---KMeMPSISNIIQAAAAYEREIKDLFGIIPL--------GHPDAKRLVF----HSN-WpngVY 171 Dehalob...
6RFQ_G               208 hPLRKDFPL 216 Yarrowia lipolytica
Q609T9               139 -PLRPDFPL 146 Methylococcus capsulatus
WP_015282015         144 -PLRPGFAP 151 Thioflavicoccus mobilis
jgi:Thivi_2909       195 -PLRHDFPL 202 Thiocystis violascens DSM 198
jgi:Slit_2560        130 -PLRKDFDA 137 Sideroxydans lithotrophicus ES-1
BAL23802             130 -PLRFESTG 137 Azoarcus sp. KH32C
Q13II9               136 -PLRKRSSG 143 Paraburkholderia xenovorans LB400
UNSW:PCNPT3_12255    153 -PLCKDA-M 159 Psychromonas sp. CNPT3
jgi:Desaci_0326      183 -PLRKDFAV 190 Desulfosporosinus acidiphilus SJ4
EdlabUofT:DCF50_p761 172 -PLHKAFPA 179 Dehalobacter sp. CF
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