6GCS,5XTB,8QBY,8ESW,8E73,6NBQ,6ZIY,7Q5Y,7Z0S,6U8Y,6CFW


Conserved Protein Domain Family
Complex1_30kDa

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pfam00329: Complex1_30kDa (This model is not part of the current CDD release)
Respiratory-chain NADH dehydrogenase, 30 Kd subunit
Statistics
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PSSM-Id: 513357
Aligned: 489 rows
Threshold Bit Score: 54.0402
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6GCS_G        98 LHVAPSAVIPVTTFLRD------------------Nt---sTQYKSIIDIT-AVDyps--renRFEVVYNFL-------S 146 Yarrowia lipoly...
Q0W2B9        30 VRAGKDALPYVASFVAK------------------------RYGASLATLHvad-------trQMTGGYTMYavmp---- 74  uncultured meth...
Q24ST8        37 VWLKPACLPEVMEQLWL------------------KvpsrpLLMTHV-----GNDersl---ghgfVIYLLLhfpgdftL 90  Desulfitobacter...
WP_015263364  34 VLLDSQCLPEVIQHIWV------------------EattrpMLLTHV-----GNDerel---ghdfALYLLFhfpgdftL 87  Desulfitobacter...
WP_012992459   8 hEVTDENLAKEVSSILNa-----------------------GG--YLLAVV-GSDere--lrgKFCIRYFFF-------T 52  Thermocrinis albus
Q609T9        34 cPVIPEDWGDAAEAAAAqgcrwag----------gwgeargESWVVNALLEkSGD--------------YLL-------- 81  Methylococcus c...
WP_015282015  35 lrLAPPDWGTAAQIAAGlglrwa------glwgdpQvetgeETLVVQACLVrDGD--------------YLV-------- 86  Thioflavicoccus...
WP_014779243  72 LVLDPEDWAAAAKLAAGmgmrhaglwsdpletevsEaeieePCLRVRACLEqAGD--------------YLV-------- 129 Thiocystis viol...
WP_013030683  22 gEIGPDDLHEICRQVHDg----------------------gGRLVALW----GSDtrqqdrgfQLHVLLLNE-------- 67  Sideroxydans li...
WP_012405290  26 AHTDAATWVRIAGTAREq----------------------gGRLISLWGAQaGVEava--gafTMSAAYAMH-------- 73  Paraburkholderi...
6GCS_G       147 VrhnSRIR-LKTya-teVt--P-VPSITCLYEGANWFEREAYDMYGVFFE--------GHPDLR-RIMT----DYG-F-- 205 Yarrowia lipoly...
Q0W2B9        75 -vasENLI-VSIea-evPespGtFQSLTPMIYSANWFEREIADMFGLTPV--------GHPDLR-PLVLydtwPED-Yh- 140 uncultured meth...
Q24ST8        91 T---LGARgIEKs----------FPSLTLLCPALNWPEREVRDLLGLHPD--------GHPDPR-PLVLhpgwTGGfY-- 146 Desulfitobacter...
WP_015263364  88 T---LVARgIKDs----------YPSLTILCPALNWAERELKDLMGLTPE--------GHPDTR-SLVLhpgwPADfH-- 143 Desulfitobacter...
WP_012992459  53 Eqr--kLR-VLEl---lCe--EsFPSITPLCPAAKLYEREIKDMFGLEPV--------GHPDPRpLMLH----PEN-Wpp 111 Thermocrinis albus
Q609T9        82 ---------LRTvl-ppGr--TgLPSHTPHFPGAARPERHTRDLLGLKFI--------GHPDDR-RWVRhqawGEReF-- 138 Methylococcus c...
WP_015282015  87 ---------LATev-saAk--PeLASHTPFFAGADRLERHAQDLLGLRFT--------DHPDPR-RWTRhqawPEDaH-- 143 Thioflavicoccus...
WP_014779243 130 ---------IETdv-plNr--PlLGSQTPAYPGLDRLERHAHDLTGVVFTghpfdsaqDRPDER-RWTRhqawPADrF-- 194 Thiocystis viol...
WP_013030683  68 ----TGMVcLNVql-saEq--PvYPDISQIFPAASRMQRATYDMLGIYAQ--------EGHDHR-KWVRhgawHSGsF-- 129 Sideroxydans li...
WP_012405290  74 ----DGLLwVQLpvamgNeeaAgYPDLSTIFPCASRMQRAVYDLLGLRAT--------GAADSR-PWLNhgnwPADyY-- 138 Paraburkholderi...
6GCS_G       206 -EGhPLRKDFPLTG 218 Yarrowia lipolytica
Q0W2B9       141 ----PLRKDAPGRP 150 uncultured methanogenic archaeon
Q24ST8       147 ----PLRKPCPETP 156 Desulfitobacterium hafniense Y51
WP_015263364 144 ----PLRKSKPRTT 153 Desulfitobacterium dichloroeliminans
WP_012992459 112 hLH-PLRKDFDGRK 124 Thermocrinis albus
Q609T9       139 ----PLRPDFPLAG 148 Methylococcus capsulatus
WP_015282015 144 ----PLRPGFAPAE 153 Thioflavicoccus mobilis
WP_014779243 195 ----PLRHDFPLSG 204 Thiocystis violascens
WP_013030683 130 ----PLRKDFDAAA 139 Sideroxydans lithotrophicus
WP_012405290 139 ----PLQKLSSGTE 148 Paraburkholderia phymatum
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