1G6P,8TG0,2YTX,1WFQ,2YTY,2YTV,8H1I


Conserved Protein Domain Family
CSD

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pfam00313: CSD (This model is not part of the current CDD release)
'Cold-shock' DNA-binding domain
Statistics
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PSSM-Id: 513343
Aligned: 39 rows
Threshold Bit Score: 63.798
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1G6P_A   1 MRGKVKWFDSkkGYGFITKDEGG-DVFVHWSAIEMEGfKTLKEGQVVEFEIQE--G-KKGPQAAHVKVV 65  Thermotoga maritima
O75534 186 CQGVVCAMKE--AFGFIERGDVVkEIFFHYSEFKGDL-ETLQPGDDVEFTIKD--R-NGKEVATDVRLL 248 human
P18395 519 LLGYVATLKD--NFGFIETANHDkEIFFHYSEFSGDV-DSLELGDMVEYSLSKg-K-GNKVSAEKVNKT 582 Norway rat
P18395  26 ETGVIEKLLT--SYGFIQCSERQaRLFFHCSQYNGNL-QDLKVGDDVEFEVSSdrR-TGKPIAIKLVKI 90  Norway rat
P0A976   5 MTGIVKTFDGksGKGLITPSDGRiDVQLHVSALNLRDaEEITTGLRVEFCRIN--G-LRGPSAANVYLS 70  Escherichia coli K-12
Q32HR9   5 MTGIVKTFDRksGKGFIIPSDGRkEVQVHISAFTPRDaEVLIPGLRVEFCRVN--G-LRGPTAANVYLs 70  Shigella dysenteriae Sd197
O65639  11 STGKVNWFNAskGYGFITPDDGSvELFVHQSSIVSEGyRSLTVGDAVEFAITQg-S-DGKTKAVNVTAP 77  thale cress
2YTX_A  19 CQGVVCAMKEa--FGFIERGDVVkEIFFHYSEFKGDL-ETLQPGDDVEFTIKD--R-NGKEVATDVRLL 81  human
1WFQ_A  19 ETGVIEKLLTs--YGFIQCSERQaRLFFHCSQYNGNL-QDLKVGDDVEFEVSSdrR-TGKPIAVKLVKI 83  human
2YTY_A  19 llGYVATLKD--NFGFIETANHDkEIFFHYSEFSGDV-DSLELGDMVEYSLSK--GkGNKVSAEKVNKT 82  human
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