Conserved Protein Domain Family
Ribosomal_L11

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pfam00298: Ribosomal_L11 (This model is not part of the current CDD release)
Ribosomal protein L11, RNA binding domain
Statistics
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PSSM-Id: 513329
Aligned: 580 rows
Threshold Bit Score: 44.6412
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EKG09827       48 RTPPTATLLLSAAGVKpgkgnkvRGAGNSpgprnnaegasGKagsgknvevrgnsstGtV---GTVSLKHVFEIARIKQS 124
XP_001708607   73 VVPTASSLLVKALGEG-------PRTIPK-----------GQ---------------P-LlhtGTVKFDTVLDIAKELR- 117
XP_004030146   74 LNTSSA-LLIKELGKH-------SRDRKK-----------VK---------------N-VkhnGDLSLEQIKKVAKIMEA 118
A0DAU7         68 VIPTSSALLIKEIGGY-------ERDRKK-----------TK---------------N-VkhnGNLTLEQVIKVARAVEe 113 Paramecium tet...
CCJ29757       90 IVPSASALIIKALKEP-------PRDRKK-----------EK---------------N-IkhaGNLSLDDIIEIARQMR- 134
Q8SR84         73 VQPSVATLIIKSLKEP-------PRDRKK-----------EK---------------N-IlhnGSLRMTEVVDIARIARS 118 Encephalitozoo...
EJW01858       72 VTPSTATLIIKALREP-------VRDRKK-----------EK---------------N-VlhsGSLKMTDIIEIARKKL- 116
ELQ75213       72 VLPSTATLILKALNEP-------PRDRKK-----------EK---------------N-IkhtGSITLVDVVEIARAMK- 116
65_pfamImport   1 AEPGTSALILKELKEP-------PRNRKK-----------EK---------------N-IqhnGSLSLDAVVQIAKKQR- 45 
XP_003392811   73 VTPSVASRLIRALKEP-------PRDRKK-----------VK---------------N-IkhsGNIPFAEIIKIAKESQ- 117 Leishmania inf...
EKG09827      125 -ESRlQGtSLEALAKSVVAQAGSMGVVV 151
XP_001708607  118 -ANS-FAlKYAGTVLEVLGSARSVGCKV 143
XP_004030146  119 dNKS-FAkTFAGTVKSVLGTAQSIGVTV 145
A0DAU7        114 --KS-LAkTFTGTVKQVLGTAQSLGATV 138 Paramecium tetraurelia
CCJ29757      135 -FKS-FSkNLCGTVKEVLGTAFSIGCFV 160
Q8SR84        119 -SRS-YSnSLSGTVKEVLGTCKSIGCKV 144 Encephalitozoon cuniculi GB-M1
EJW01858      117 -PDS-QCkTLRSVVKCVLGTCLSVGCKV 142
ELQ75213      117 -GRS-LSnEFKGTIMQVLGTCVSIGCKI 142
65_pfamImport  46 -SKS-YArTLAGTVKEILGTCLSIGCLV 71 
XP_003392811  118 -PKS-MGsDLKAVVMEVLGTAVSIGCTV 143 Leishmania infantum JPCM5
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