1Z7W,5IWC,6L0Q,5YBW


Conserved Protein Domain Family
PALP

?
pfam00291: PALP (484234 is an unknown moldel)
Pyridoxal-phosphate dependent enzyme
Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.
Statistics
?
PSSM-Id: 484234
Aligned: 142 rows
Threshold Bit Score: 76.9642
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1Z7W_A          9 VTELIGNTPL-----VYLNNVA----EGCVGR-VAAKLEMME-PCSSVKDRIGF---SMISDaEKKGli--kPGESVLIE 72  thale cress
WP_012185424   56 ISLGEGFTRI-----RRING-------------VVIKYEGNN-PTGTYYDRGSA---VLASV-SNNG-----D----VEL 103 Caldivirga maq...
WP_011822196   66 VSFSEGYTPL----------------RRVKDR-VLLKLENRN-PTGSYADRASSlvaSFIAS-TRNH------PSMVTIP 120 Hyperthermus b...
Q5E4U3         63 ITFNEAITPL-----CQA--------EISGTP-ILVKLDSLQ-PTGSFKDRGAS---LVINY-LNNH------GITSIAE 117 Aliivibrio fis...
WP_011032087   60 lTTEAGPITYksealAKELGLSnlyiGFSG---YWPEREALI-KTCSFKELEAH---PTMQL-LKES------GGKAIVL 125 Methanosarcina...
15_pfamImport   1 APTHVGGTPL-----LHAQRFG----GLLGLPrLYIKDERYS-PTNSFKDRQAA---LAVAA-LVSN------DIRECVI 60 
Q5ZUZ9         98 LTFSF---PL-----HHLFKKS-------------YVLELFHgPTLSFKDLGTQffsECLLH-LIEN------KSAKVLV 149 Legionella pne...
Q9ZMX5         74 KRYENFDNPK-----NPAPIFA------LNER-LFVQELYHG-PSLAFKDMALQplaSLFSN-LAVGk----NEKYLVLV 135 Helicobacter p...
WP_012051144   82 GFRHRGIAPL----------------QQLGHN-EWILQLFHG-PTRSSKDFAAQ----LQAR-FVRHflgaeCERVMLVG 138 Pseudomonas pu...
WP_003153970   82 VFAHDAVAPL-----RQLNGNE------------WV-LELFHgPTLAFKDFALQ----LLGR-LLDHvlakrGERVVIMG 138 Pseudomonas ae...
1Z7W_A         73 PTSGNTGVGLAFTAA--AK-GY-KLIIT--MPASMST--ERRIILLAFGV---ELVLTd--pAKGMKGAIAKAE---EIL 136 thale cress
WP_012185424  104 TFEEDLTRSLALYLS--MV-GA-KVTVS--VDSNVDP--RDLLILAKLST---RVCVN-------------------CVK 153 Caldivirga maq...
WP_011822196  121 YTE-DYTVSLSLYLR-----GItGVRVVa-DPRTVNP--SDVIILDRLGV---DIVFS-------------------SDA 169 Hyperthermus b...
Q5E4U3        118 DSSGNGGSAYAGYAA--KG-NM-QCNIF--VPAGTSK--GKTTQTRLYGA---NCIEV----EGTREDVALA-----AIE 177 Aliivibrio fis...
WP_011032087  126 ASAGNTGRAFAYSSS--LT-GT-DAYIV--VPDSGV---SSIWLPEEPAN---SIHLIsmtpGNDYTDAINLAG---RLA 190 Methanosarcina...
15_pfamImport  61 ASTGNAAVAYASACA--AV-GI-KLWVF--MTSVVPE--AKLREAALFGA---EVIKV----SGNYDQTKQIAA---DFA 122
Q5ZUZ9        150 ATSGDTGAAIAHALD--GKrDL-EGIIL--FPKDKLTf-RQQSQITCWGE---NIRALa--vNGSFDQCQQLVKlvfAKR 218 Legionella pne...
Q9ZMX5        136 STSGDTGPATLEGLA-----GMpNVFVVclYPKDGT---SLVQKLQMVTQnasNLKVFg--vSGDFDDAQNALK---NLL 202 Helicobacter p...
WP_012051144  139 ASNGDTAVAAIEALRhcPAaG--LLALY--PSAGTPA--DRAAVMRSAASdsvSCVAV----DGSFDDCQSLVS---ALL 205 Pseudomonas pu...
WP_003153970  139 ATSGDTGSAAIEGCR--RCdNV-DIFIM--HPYNRVSevQRRQMTTILGD---NIHNIa--iEGNFDDCQEMVK---ASF 205 Pseudomonas ae...
1Z7W_A        137 AK--TPNGYMLQQFEnp-----aNPKIhYETTGPEI----W---KGTG----GKID--GFVSGIGTG-GTITGAGKYLKE 195 thale cress
WP_012185424  154 NP--------SVDYFdp-----lLIEG-FKTISYEL----I---EQLN----DLRA---VTVPVERG-ALALALVKGFME 204 Caldivirga maq...
WP_011822196  170 TN---LNNTSLLDYLsp-----lTIEG-LKTIAYEI--------VEAR----PNSS--RVIVPSETG-LLALAIAKGFYE 225 Hyperthermus b...
Q5E4U3        178 SSv-THGSHYVGHNWhp-----lFIEG-VKSIAYEI----W---EQCGy---KAPD--NFVVPAGNG-SLLAGAYIGFSE 237 Aliivibrio fis...
WP_011032087  191 KL---PGMVPEGGARnv-----aRREG-MGTVMLDA----A---VTIG----KMPD--HYFQAVGSGtGGMSAWEASLRL 248 Methanosarcina...
15_pfamImport 123 QN---RNIIYDRGANsi-----pAREA-MKTISYEI----C---EQLGw---QAPD--WYIQAVSGG-LGPLGVYHGFAE 180
Q5ZUZ9        219 EH---KGILTTANSMniarllpqIIFYaFTSIQLAL---------RHN----HSVN---FIVPGGNL-GNVTACYWAKML 278 Legionella pne...
Q9ZMX5        203 KDddFNEALKARQLKls-----vANSVnFGRIAFQIvyhiWgflELYKkgaiNSKE--KITLAIPSG-NFGNALGAFYAK 274 Helicobacter p...
WP_012051144  206 RD--WPCPGLIPVSFns-----tNWVGvLAQIVFYF----------------------HAALQLGGG-IRPVGFSIPTAS 255 Pseudomonas pu...
WP_003153970  206 AD---QGFLKGTRLVavn---siNWARiMAQIVYYFha-----aLQLG----APHRsvAFSVPTGNF-GDIFAGYLARNM 269 Pseudomonas ae...
1Z7W_A        196 ----QNAN--------VKLYGVEPV--ESAILSGGK-PG------------------PHKIQGIGAG--FIPSVLNVDLI 240 thale cress
WP_012185424  205 ----LEDK------------GIISN------MPKII--------------------------GVHVG---PLKSPIGDQL 233 Caldivirga maq...
WP_011822196  226 ----------------ANMAGIDAS-------YEVV---------------------AAAVEGSGEP---ELARYAPIKV 258 Hyperthermus b...
Q5E4U3        238 l--lKGGEis----klPRLFGIQSE--SIQPFVQTF-NNkein----------itseDTIAEGIKIKr-SSRMNEIVQFV 297 Aliivibrio fis...
WP_011032087  249 rddgRFGSk------lPKLQLAQNL--PFVPMYNAWkAGrreiipdidmkdakkqieETYATVLTNR--APPYSITGGLY 318 Methanosarcina...
15_pfamImport 181 lhamGLTQr------vPQTAIIQAE--GCSPMVQAFqAGksvae---------kvvpNTRIAILSTGdpGKIYTRLWQRI 243
Q5ZUZ9        279 ----GFPV--------EQILIANNI---NSALGEFLlTGayqa----------ksvtKTLATAMDVGe-PSNLDRLFVLF 332 Legionella pne...
Q9ZMX5        275 ----KMGL---------NIAKIKVVtnSNDVLREFIeTGr----------------yDLTKRSLKQT--FSPAMDILKSS 323 Helicobacter p...
WP_012051144  256 faeiYAGFiaqkmglpINQIIVSTN--RNDALHRFIhCNrysr----------gstsQTLSPVMDFSlfSNLERFVWELY 323 Pseudomonas pu...
WP_003153970  270 ----GLPV---------SQLIVATN--RNDILHRFMsGNrydk----------dtlhPSLSPSMDIMvsSNFERLLFDLH 324 Pseudomonas ae...
1Z7W_A        241 ---DEVVQ---------VSSDESIDMARQLALKEGLLVGISSGAAAAAAikLAQRPENAGK-LFVAIFPS 297 thale cress
WP_012185424  234 ---RELGIkf-----mgVKPEDTINAVVELA-KHSVFARPISASAYVAA------KEIHES---VAVVSG 285 Caldivirga maquilingensis
WP_011822196  259 kv-------------eyVSSEEVVKALVELS-RRGLRVKPLSAAAYAAA------LNLGEG---VAVITS 305 Hyperthermus butylicus
Q5E4U3        298 ---KETNGnf-----isVNEQQIQSALKEMG-AQGYFIEPTSATAFAGIaqLIKTQEIKPDeLTVGVVTG 358 Aliivibrio fischeri ES114
WP_011032087  319 dalVDTDGim-----yaITREEALEAKALFESLEGIDILEPSAVAAASLlkAVEAGNVEKDdVILLNIAG 383 Methanosarcina mazei
15_pfamImport 244 ---QTSGGtm-----eaVTDEEAFSAMRLLARTEGISVEPATAVAFAGLqkMVAQGQVNPEeLIVVNCTG 305
Q5ZUZ9        333 ---NNYSEckkqmnaesVSDEQIKQAILHCYNKYHYIICPHTATAYHRL------STINQDkPWVIVAPG 393 Legionella pneumophila s...
Q9ZMX5        324 ---NVERAlf-----slFGFERTLELMQALEEEKFYALKP---KELALLqeHFSCASCSDE-DCLKTIQE 381 Helicobacter pylori J99
WP_012051144  324 ---DRDGGa-------tRALMEHFEACGELSIGNRQWL--HARMLFDSY--AVDDALIREE-----IVTl 374 Pseudomonas putida
WP_003153970  325 ---GRNGKa-------vAELLDAFKASGRLSVEDERWTEAr---------kLFDSLAVSDE-QTCETIAE 374 Pseudomonas aeruginosa g...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap