Conserved Protein Domain Family
SAA

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pfam00277: SAA (This model is not part of the current CDD release)
Serum amyloid A protein
The serum amyloid A (SAA) proteins comprise a family of vertebrate amphipathic alpha-helical apolipoproteins that associate predominantly with high density lipoproteins (HDL). They play a role in the mobilisation of cholesterol for tissue repair and regeneration. The synthesis of these proteins is greatly increased (as much as a 1000 fold) in inflammation, being a major acute phase reactant together with C-reactive protein. They act as cytokine-like proteins that are involved in cell-cell communication and in inflammatory, immunologic, neoplastic and protective pathways. Prolonged elevation of plasma SAA levels, as in chronic inflammation, results in a pathological condition, called amyloidosis, which is characterised by the highly insoluble accumulation of SAA in several tissues. During chronic inflammation, SAA association with HDL can change its protein and lipid composition which abrogates the HDL anti-atherogenic properties, contributing to a pro-atherogenic state.
Statistics
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PSSM-Id: 513311
Aligned: 21 rows
Threshold Bit Score: 146.328
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CBL43865     574 VDYTVGAIGGAADFVDNYGDMRDANTIGGDKYFHCKANCEAAQRGQGGQDAARCISDSREWFDQHWp------KNDPP-S 646
P22000        22 FSFIGEAVRGAGDMWRAYSDMREANYINADKYFHARGNYDAAQRGPGGVWAAKVISDVREDLQRLM--------GHGA-E 92  rabbit
XP_006642759  21 YMFPVEAARGAGDMWSAYDDMREANWKNSDKYFHARGNRDAASRGPGGKWAAEVISNAREWWQGSA-------SGRGH-E 92 
Q4SI54        21 YKFPGQAVRGSHDMYRAYRDMRKANWKNSDKYFHARGNYDAAQRGPGGRWAAKVISDAREWAQQKT--------GRGA-S 91  spotted green p...
Q642J9        21 YRFPGEAAGGAKDMWRAYQHMKEANWKNSDKYFHARGNYEAAQRGPGGYWAAKVISDGREALQGLI--------RRGN-S 91  zebrafish
Q12LF8        55 VLNQRQWIGGAYDFFGNYRDMRDANTIGADKYFHCKANCEATKRGKGGESAACTISDSREWFDQHI-------KGDPA-- 125 Shewanella deni...
XP_011679821  36 GDFVSGAVRGAGDMWRSYSDMREANTIGADKYFHARGNYEASQRGSGGRFAARVISDAREGWQGGV-------SGRGA-K 107
P42819         3 LSFLGEAYEGAKDMWRAYSDMREANFKGADKYFHARGNYDAAQRGPGGVWAAEVISNGREALQGITdplfkgmTRDQVrE 82  sheep
NP_001366205  26 iKFVRDAAGGARDMWRAYRDMREANYIGADKYFHARGNYDAARRGPGGAWAAKVISDAREGWQSRV-------SGRGA-E 97  chicken
XP_056659680  26 ARFIKEAGQGAGDMWRAYWDMREANYKNSDKYFHARGNYDAAQRGPGGAWAAKVISDGREFLQGGS-------SGRGV-E 97  gray short-tail...
CBL43865     647 ASAADQVANLYGRTQGAENTggncqqicapFRPNGLPSQY 686
P22000        93 DSMADQAANEWGRSGKDPNH----------FRPKGLPDKY 122 rabbit
XP_006642759  93 DTEADQEANRWGRDGGDLSK----------YRPKDLPEKY 122
Q4SI54        92 DSAADQAANRWGRNGGNPNV----------YRPRGLPRRY 121 spotted green pufferfish
Q642J9        92 DAAADQEANLWGRNGGDPNK----------YRPKGLPIKY 121 zebrafish
Q12LF8       126 -SAADQAANIFGRSNASSPQscsl--vcsaFRPNGLPQGY 162 Shewanella denitrificans OS217
XP_011679821 108 DTQADQEANRWGRNGGDPNR----------YRPAGLPDGY 137
P42819        83 DTKADQFANEWGRSGKDPNH----------FRPPGLPDKY 112 sheep
NP_001366205  98 DTRLDQEANEWGRRGGDPNR----------FRPAGLPNKY 127 chicken
XP_056659680  98 DSRADQFANEWGRSGKDPNH----------FRPAGLDPKY 127 gray short-tailed opossum
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