1JK0,1SYY,7MMQ,2BQ1


Conserved Protein Domain Family
Ribonuc_red_sm

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pfam00268: Ribonuc_red_sm (484216 is an unknown moldel)
Ribonucleotide reductase, small chain
Statistics
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PSSM-Id: 484216
Aligned: 243 rows
Threshold Bit Score: 158.821
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JK0_B         34 RFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFq---KLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQN 110 brewer's yeast
44_pfamImport   1 VNQLLPLKYKWAWEKYLCACNNHWMPTEVSMQADIALWksknGLTDDERRMIKRNLGFFASSESLVANNIVLAIYKHLSN 80 
3_pfamImport    1 VNQLLPMKYKWAWEKYLAGCNNHWMPTEVAMQADIALWkspdGLTEDERQMLKRNLGFFATAESLVANNIVLAVYRQITN 80 
16_pfamImport   1 VNQLLPMKYGWAWEKYLAGCDNHWMPTEVSMQADIALWkspdGLTDDERLMLKRNLGFFATAESLVANNLVLAVYRHLTN 80 
WP_013292360   45 VNQLVPFKYKWAWEKYLAACANHWMPQEVNMTADIALWks-dKLSDDERRLIKRNLGFFTTADSLAANNIVLGSYRHITN 123 Gallionella ca...
Q21T46         79 VNQLVPFKYKWAWEKYLSSCANHWMPQEVNMTRDIALWkdpnGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITA 158 Rhodoferax fer...
WP_015829854   62 VNQLVPFKYHWAWDKYLAGCANHWMPQEISMSRDIAQWkdssALTEDERLIVKRNLGFFTTADSLAANNIVLGTYRHITA 141 Methylovorus g...
Q5ZUL8         58 LNQLVPFKYKWAWDKYLTACANHWMPNEISMSADVALWkdpyGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITN 137 Legionella pne...
Q21HW0        102 LNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADVATWkspdGLSEDERRIIMRSLGYFSTADSLVANNLVLAIYRHITN 181 Saccharophagus...
Q0VRP0        109 LNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADLALWkkadGLTDDERRIVKRNLGFFATADSLVANNLVLAIYRLITN 188 Alcanivorax bo...
1JK0_B        111 PEGKSFYGFQIMMENIYSEVYSMMVDAFFkdpKNip-lFKEIANLPEVKHKAAFIERWISNDDsL-------------YA 176 brewer's yeast
44_pfamImport  81 AECRQYLLRQAFEEAVHTHTFQYIVESLG---LDegelFNMYREIPSITNKAVWALKYTQSLN-DknfitgtpkadqdFL 156
3_pfamImport   81 PECRQYLLRQAFEEAVHTHTFQYICESLG---LVegelFNMYREVPSISDKDAWALKYTQNLE-NpdfetgtpeadqaFL 156
16_pfamImport  81 PECRQYLLRQAFEEAVHTHTFQYICVSLG---LDegelFNAYREVPSIANKDSWALRYTRNLE-DpnfttgtmeadqeFL 156
WP_013292360  124 PECRQFLLRQAFEEAIHTHAYQYIVESLG---LDegeiFNMYHEVPSIRNKDEFLLPYIDVLT-NpefktgtpeadqaLL 199 Gallionella ca...
Q21T46        159 PECRQFLLRQAFEEAIHTHAYQYIVESLG---LDeseiFNAYNEVQSIRDKDEFLIPFIEAIM-DpafktgtheadqtLL 234 Rhodoferax fer...
WP_015829854  142 PECRQYLLRQAFEEAIHTHAYQYIVESLG---LDeseiFNAYQEVSSIRDKDDFLIPFINTLT-DpefktgttqadqqLL 217 Methylovorus g...
Q5ZUL8        138 PECRQYLLRQAFEEALHTHAYQYIIESLG---LDeaevFNMYREIPSVSRKAVWALPFTQSLG-DetfhtgtpendqrLL 213 Legionella pne...
Q21HW0        182 PEARQYLLRQAFEEAIHTHAYQYCIESLG---MDegevFNMYREVPSVAKKAAWSIAHTQGMS-DptfktgtpeadqeLL 257 Saccharophagus...
Q0VRP0        189 PECRQYILRQSFEEAIHTHAYQYCIESLG---MDegeiFNMYQEIPSVAKKAQWGIQYTRDLS-DpefttgtpetdkaLL 264 Alcanivorax bo...
1JK0_B        177 ERLVAFA-AKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHL--R-----TKPNPKIIEKIIT 248 brewer's yeast
44_pfamImport 157 RDLIAFYvIFEGMWFYTGFAQILSLGRRNKMVGIAEQYQYILRDESIHLNFGIDVINQIkiEcpylwTPSFQEEIQTMLK 236
3_pfamImport  157 RDLVAFYvIFEGMWFYTGFAQILSLGRRNKMVGIAEQYQYILRDESIHLNFGIDCINQIkiEnphlwTEEFQAEVRGMLK 236
16_pfamImport 157 RDLVAFYvVFEGMWFYTGFAQVLSLGRRNKMVGIAEQYQYILRDESIHLNFGVDCINQIkaEnphlwTPEFQQQVRDMLV 236
WP_013292360  200 RSLIVFAcIMEGLFFYVGFVQILALGRQNKMTGAAEQYQYILRDESMHLNFGVDLINQIkmEnphlwTAAFREEIRGLMQ 279 Gallionella ca...
Q21T46        235 KSLIVFAcLMEGLFFYVGFAQILALGRQNKMTGAAEQYQYILRDESMHCNFGIDLINQLklEnpqlwTSEFKAEIKALFE 314 Rhodoferax fer...
WP_015829854  218 RSLIVFAcIMEGLFFYVGFVQILALGRQNKMQGAAEQYQYILRDESMHCNFGIDLINTLklEnphlwTPEFREEIKRLMQ 297 Methylovorus g...
Q5ZUL8        214 RDLIAFYvVFEGIFFYVGFTQILSMGRRNKMVGTSEQFQYILRDESMHMNFGIDVINQIkiEnphlwTPEFKNEMIQLIR 293 Legionella pne...
Q21HW0        258 RNLIGFYvITEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIklEnphlwTEEFQAETKQMIL 337 Saccharophagus...
Q0VRP0        265 ENLIAFYcVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHVNFGIDVINQIklEnphlwDAQMRDKATQMIL 344 Alcanivorax bo...
1JK0_B        249 EAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNA-VNP 300 brewer's yeast
44_pfamImport 237 EAAVLEAAYSKDTMPSGLLGINTESCQQYMYFIANRRCSQLGLAHVFEDtDNP 289
3_pfamImport  237 EACELEVKYARDTMPRGMLGLSAQLCEQYMHFVTDRRAQQIGLAPIFGEtENP 289
16_pfamImport 237 EACELEVAYAHDTMPRPMLGLSAELCEQYMHFITDRRAAQLGLDPVFGErENP 289
WP_013292360  280 KGVELEYAYAEDTMPRGILGLNATMFKEYLRFIANRRCQQIGVDILYQGaTNP 332 Gallionella capsiferriformans
Q21T46        315 QAVELEYRYAEDTMPRGVLGMNASMFKGYLRYIANRRATQIGLETLFPNeENP 367 Rhodoferax ferrireducens T118
WP_015829854  298 QAVELEYRYAEDTMPRGVLGLNAAMFKEYLRFIANRRMQQIGIDALYPGaSNP 350 Methylovorus glucosotrophus
Q5ZUL8        294 EGVELEYQYARDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGaENP 346 Legionella pneumophila subsp. pneumophila...
Q21HW0        338 EGTELEIAYARDTMPRGVLGMNAAMMEEYLHFIANRRMAQLGLAEAYPGaKNP 390 Saccharophagus degradans 2-40
Q0VRP0        345 EGTELEIQYARDTMPRGVLGMNAAMMEEYLQFIANRRLAQLGLPEQFKGvNNP 397 Alcanivorax borkumensis SK2
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