4AV2,6VE2,7OFH


Conserved Protein Domain Family
Secretin

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pfam00263: Secretin (This model is not part of the current CDD release)
Bacterial type II and III secretion system protein
Statistics
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PSSM-Id: 513297
Aligned: 81 rows
Threshold Bit Score: 119.95
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4AV2_A       576 ASESLSKTKTLANPRVLTQNRKEAKIESGYEIPFTv----tSIANGGSSTNTE--LKKAVLGLTVTPNITP-DGQ---II 645 Neisseria menin...
O66850       536 AYEQEGRAKNVAESYVITVNGEPAVISSGLEFPVTevslsgGIAn------VEpkYESIPIVLITTPVVLP-DGN---IL 605 Aquifex aeolicus
Q7NEJ4       101 LLQQVNALQTLIDQQLVVSDGETATISQNVQFRIPqti---vsnGTALSSTq---AINARTTLNLTPMVLPsKKQ---VA 171 Gloeobacter vio...
Q72WH7       372 ALEKNGEARMLGRPSVLTVDNVQATLENTSTYYIQvqg----------yqaVDlfKVEAGTVLRVTPHIINnDDGtdaIK 441 Desulfovibrio v...
Q887C1       324 ALEGNGSASVIGNPSILTLENQPAVIDLSRTEYLTats--------eraADIL--PITAGTSLQVIPRSLDnDGKp-qVQ 392 Pseudomonas syr...
Q2SH74       386 ALSEDGDASVLSQPTILTLDNIEAVLDHSTTFFVRlvg----------dreVDlfPVSVGSVVRVTPHIVK-GDLsdkIH 454 Hahella chejuen...
Q56974       350 lLENEGSAQVVSRPTLLTQENAQAVIDHHETYYVKvtg--------kevAELK--GITYGTMLRMTPRVLT-QGDkseIS 418 Yersinia pestis
Q63K21       419 ALSQTGDATVISRPIVLTQENVPATFDSNQTFYAKlig--------ertVQLD--HVTYGTLVNVLPRLTR-DGSq--VE 485 Burkholderia ps...
1_pfamImport   1 ALQKNSRARILSQPSVVTLNNIQAVLDKNVTFYTKlqg--------ekvAKLE--SVTSGSLLRVTPRMIEtEGVq-eVL 69 
Q5SII6       593 ALQQQGLSRALRDVNQTVLNNQTARLQSGETFFIRr----vVNDQ------VErvPFDVGLIVEVTPQITA-DGQ---IL 658 Thermus thermop...
4AV2_A       646 MTVKINKDSPAq----CAs--GNQTILCISTKNLNT-QAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGN-LFKT 717 Neisseria menin...
O66850       606 LSVYLARRQINsvqefPVtqtLTQKIPVFSTSRIDV-KIPIKNGETVVIGGAVEKSDSITESGVPKLREVPLLGW-LFKT 683 Aquifex aeolicus
Q7NEJ4       172 ISVRGDFSDPQg----------sGEGLVINTNSIDIpNLRLDSGGVALLGGITRHDEANIEYRVPVLSAIPILGD-LFKS 240 Gloeobacter vio...
Q72WH7       442 LVVSVQDDQNNqttptSTs--TTQAIPPIKQTKINT-QAIIGAGQSLLIGGYYYEQKATSADGVPILMNIPVLGN-LFKT 517 Desulfovibrio v...
Q887C1       393 MIVDIEDGQIDvst-------inDTQPSVRRGNVST-QAVIAEHGSLVIGGFHGLEANDRIHKIPLLGDIPYIGKlLFQS 464 Pseudomonas syr...
Q2SH74       455 LNINIEDGQQTgq--------avDDIPAVSKSIITT-EALVNDNGSLLVGGYYFNQDSTNRSKIPVLGDIPLLGR-LFRT 524 Hahella chejuen...
Q56974       419 LNLHIEDGNQKpns------sgIDGIPTISRTVVDT-VARVGHGQSLIIGGIYRDELSVALSKVPLLGDIPYLGA-LFRR 490 Yersinia pestis
Q63K21       486 MIVDIEDGNTDgatsdGQiviDNNTMPLVNRTEINT-VARVPHEMSLLIGGNTRDDVTRRTFRIPGLASIPLIGG-LFRG 563 Burkholderia ps...
1_pfamImport  70 LNLNIQDGQQQast------nsNEPLPEIRNSDIST-QATLQVGQSLLLGGFIQDTQIESQNKIPLLGDIPLLGG-LFRS 141
Q5SII6       659 LNIKAEISGNVqrn------pvDGDVDRFTKQVVTT-TLRVKDGETVVLGGLTSQESNQSQQGVPLLMDIPLIGE-LFKQ 730 Thermus thermop...
4AV2_A       718 RGKKTDRRELLIFITPRIM 736 Neisseria meningitidis MC58
O66850       684 QTKQLRDRELLIFITPEII 702 Aquifex aeolicus
Q7NEJ4       241 SNRVVKDQRLLVMIEPVIQ 259 Gloeobacter violaceus
Q72WH7       518 QSKENKRMERLILITPKVV 536 Desulfovibrio vulgaris str. Hildenborough
Q887C1       465 RSRELSQRERLFILTPRLI 483 Pseudomonas syringae pv. tomato
Q2SH74       525 DGSQLQKRARLFLISPRIV 543 Hahella chejuensis KCTC 2396
Q56974       491 KSELTRRTVRLFIIEPRII 509 Yersinia pestis
Q63K21       564 HSDRHEQVVRVFLIQPKLL 582 Burkholderia pseudomallei
1_pfamImport 142 TDKQSHSVVRLFLIKAV-- 158
Q5SII6       731 RTNESTDKELLVVITADIL 749 Thermus thermophilus HB8
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