8UWW


Conserved Protein Domain Family
Tropomyosin

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pfam00261: Tropomyosin (This model is not part of the current CDD release)
Tropomyosin
Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organisation and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Statistics
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PSSM-Id: 513295
Aligned: 34 rows
Threshold Bit Score: 60.1914
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8UWW_F        46 LQKKLKATEDELDKYSEAPKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESER 125 pig
XP_002999410   4 IREKLSNLKLEAESWQDKYEELKEQVKVLEQEKTDNENLIKSLTTKNQTLEEEVETLEGQVSEHKQLAEDSTNLKSHNEN 83 
5_pfamImport   4 IREKLATLKAESEQWQDKYEELKEEKKQLEDKNIEMENQIKSLTVKNEHLEEELEKLESQLNEHKQLAEDSTNLRSHNEN 83 
XP_001647328   4 VREKLNNLKLEAESWQEKYEELKEQYKQLEQDNTDKENEIKSLSTKNQQLEEDVENLETKLTDSKQIAEDSHNLRSNNEN 83 
Q6FKV5         4 VKEKLTNLKLEAESWQEKYEELKEQMKQLEQDNIQKENEIKSLTVKNQQLDQEVEKLEDQIKETKELAEESTTLKSHNEN 83  [Candida] glabrata
P40414         4 IKEKLNSLKLESESWQEKYEELREQLKELEQSNTEKENEIKSLSAKNEQLDSEVEKLESQLSDTKQLAEDSNNLRSNNEN 83  Saccharomyces c...
XP_001383929   4 LKEKINNLKADAEKWQEKSDELADRIKELEQENLEKDHQIQSLTRKNQVLEEQVEKLETDLEEIKHTADESHSLKTSNDN 83 
XP_002493520   4 LKEKINKLKLDAETWQEKHDDVNSKIKVLEQEALEKDHQIQALTRKNDVLEEQVEKLEEQLSTSKETVNESHSLKTNNEN 83 
XP_001640041   4 LRAKKDEMLKKIEEFEEREKAAMKKIARLEEVIAKDKNESATLRRSCSLTEHQLDKTEDILDQKLERLVMLHKKTEQDIQ 83 
XP_001630767  10 VKAKLQAIKEKIDETEDRELAAMEKLREAEERFEKAEGEAESFKRRIQLIEAESRRVKELSQKKDHELEEMHKRSKEEEN 89 
8UWW_F       126 GMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLK 205 pig
XP_002999410  84 ---------------------------------------FSKKNQQLEEELEEN-------------------------- 98 
5_pfamImport  84 ---------------------------------------FTKKNQQLEEELEES-------------------------- 98 
XP_001647328  84 ---------------------------------------FTKKNQQLEEELEET-------------------------- 98 
Q6FKV5        84 ---------------------------------------FNKKNQMLEEELEET-------------------------- 98  [Candida] glabrata
P40414        84 ---------------------------------------YTKKNQDLEQQLEDS-------------------------- 98  Saccharomyces c...
XP_001383929  84 ---------------------------------------YTKKNQVLEEELEEA-------------------------- 98 
XP_002493520  84 ---------------------------------------ITKKNQLLEEELEAA-------------------------- 98 
XP_001640041  84 MLKVLEDRELEVDNSLDRLEPSAKAAIQRQHDAEMRCMEVQRRLTLTTSELHKIRARQREKEEEVRELENRLKVGGRSIQ 163
XP_001630767  90 LCKTLEVTDRESDEKMRELEDALEEAIELDKSTADKLAEVELKIKVVQGELEKAVERGDRAEMMCEHLMNDFTGTSEVLR 169
8UWW_F       206 SLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI 284 pig
XP_002999410  99 ----------------DSKLKETTEKLREADLKVEQLERKVTSLEQERDDLEKKYDDLQTKYDAAKAELDEISASLENL 161
5_pfamImport  99 ----------------DTKLKETLELLRETDLKSEQLERKVASLENEVQDWESKYEELQTKYSSAKGELDEITASLEHL 161
XP_001647328  99 ----------------DLKLKETIEKLRESDLKSETLERKVNALEDERNDWEKKYEDLSVQYETAKKELDEIAASLENL 161
Q6FKV5        99 ----------------DRKLKETSDRLKEIELNSETLERKTAALQEERDEWEKKYEEVAAKYEDAKKELEEFANSLENL 161 [Candida] glabrata
P40414        99 ----------------EAKLKEAMDKLKEADLNSEQMGRRIVALEEERDEWEKKCEEFQSKYEEAQKELDEIANSLENL 161 Saccharomyces ce...
XP_001383929  99 ----------------DKNLKETTEKLRETDIKAEQLERKVASLEQEKEEWERKYEELTEQHLAAKSELDEISQQLEAI 161
XP_002493520  99 ----------------DKNLKETTEKLRDTDIKAEALEKKVTSLENEREEWERKFEELQEKYNATREELDAISEQLENL 161
XP_001640041 164 QLVISEEKYCDKEDEFRHRIRLLKANLAATILRAEESERRCMRLERENDMVEEETRAYKKNYDMMQKELHDTLNDIECV 242
XP_001630767 170 DLEVKDAAASEREIDNEDKIEFIQENLKQMVYRYEEAERKAPPLEMLLDQLVEDLELYRLKRKQVDEEMKAMGELVEQV 248
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