2W49


Conserved Protein Domain Family
Tropomyosin

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pfam00261: Tropomyosin 
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Tropomyosin
Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites. The protein is best known for its role in regulating the interaction between actin and myosin in muscle contraction, but is also involved in the organisation and dynamics of the cytoskeleton in non-muscle cells. There are multiple cell-specific isoforms, expressed by alternative promoters and alternative RNA processing of at least four genes. Muscle isoforms of tropomyosin are characterized by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region.
Statistics
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PSSM-Id: 425563
Aligned: 18 rows
Threshold Bit Score: 154.416
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2W49_A        41 KKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADES---E 117 rabbit
1_pfamImport   1 KKIKVLQEQAEEAVERAERLQKEVEKERKAKEEAEMEVCTLCNRLQNQEDVLERTQQDLEKACRQQLEFEKVADERqrpH 80 
Q6S5G5         6 KKMATLRQTLEDAEARAAKAEDELKNANDRADSAETEVAALTKQLQQLEDDLDAAESKLADTQGQLTEAEKQADES---E 82  starlet sea ane...
EDO38704      12 AKLQAIKEKIDETEDRELAAMEKLREAEERFEKAEGEAESFKRRIQLIEAESRRVKELSQKKDHELEEMHKRSKEE---E 88  starlet sea ane...
EDO42849       9 EKMQQIKDQTDDAEERELGAKSLLKEAEAKEEQLLSEASGIQRRITLLNSELEKTNERVEE-QEKLLQNLVHNSEMn--E 85  starlet sea ane...
XP_003372651  48 KKMMQVENELDKAQEELTGANAQLEEKEKKVQEAEAEVAALNRRIQLLEEDFERAEERLKIATEKLEEASQTADES---E 124 Trichinella spi...
P06754       102 KKMRQTKEEMEKYKDECEEFHKRLQLEVVRREEAESEVAALNRRIQLLEEDLERSEERLGSATAKLSEASQAADES---E 178 fruit fly
Q17H78        17 KKMRQTKEEMEKYKDECEEFHKKLQGEVMRREEAESEVAALNRRIQLLEEDLERSEERLASATAKLSEASAAADES---E 93  yellow fever mo...
Q6NN28        48 KKIQTVENELDQTQEALTLVTGKLEEKNKALQNAESEVAALNRRIQLLEEDLERSEERLGSATAKLSEASQAADES---E 124 fruit fly
Q60UW4        20 KKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEEDLERTEDRLKVATSKLEQATKAADEA---D 96  Caenorhabditis ...
2W49_A       118 RGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNL 197 rabbit
1_pfamImport  81 RGMKVIENRAQKDEEKLEFLEAQLNEAKGIADEADRKYEESARRVKCLEDDLERAEDKAAKSLSKCCVLEEELKTIIATS 160
Q6S5G5        83 RARKVLENRGASDEERLASLERQYNDALERTEEAEKQYEEISERLQELENELEEAEQKADAAEARVKELEEEVTLVGNNL 162 starlet sea ane...
EDO38704      89 NLCKTLEVTDRESDEKMRELEDALEEAIELDKSTADKLAEVELKIKVVQGELEKAVERGDRAEMMCEHLMNDFTGTSEVL 168 starlet sea ane...
EDO42849      86 EARKGLEESEMKGDEKIMDLEAKLKEMERVEKETLETLTEAERKEVVVTRDLERAIEKGRTLENRIQSLESTMGNALTNI 165 starlet sea ane...
XP_003372651 125 RVRKVMENRSLQDEERVYQLEAQLKEAQLLAEEADRKYDEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNL 204 Trichinella spi...
P06754       179 RARKILENRALADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLERAEERAEQGENKIVELEEELRVVGNNL 258 fruit fly
Q17H78        94 RIRKALENRTNMEDDRVAILEAQLSQAKLIAEEADKKYEEVARKLVLMEQDLERSEEKVEMNESKIVELEEELRVVGNNL 173 yellow fever mo...
Q6NN28       125 RIRKALENRTNMEDDKVALLENQLAQAKLIAEEADKKYEEVARKLVLMEQDLERSEEKVELSESKIVELEEELRVVGNNL 204 fruit fly
Q60UW4        97 RARKSMETRSQQDEERANFLETQVDEAKVIAEDADRKYEEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNL 176 Caenorhabditis ...
2W49_A       198 KSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMT 275 rabbit
1_pfamImport 161 RSLEAQVEKYSVKEDKYELAIRNLTDKLKEAENRAEAAERTLSTCERTISSLEDALGEAREENTKITATLDQTLHDLN 238
Q6S5G5       163 RSLEISEGKASEREDTYENQIRELETKLQDAEERAEKAEQKVQELEAQAEAMEAELEKAKEQYEKVKEELDSTLAELS 240 starlet sea anemone
EDO38704     169 RDLEVKDAAASEREIDNEDKIEFIQENLKQMVYRYEEAERKAPPLEMLLDQLVEDLELYRLKRKQVDEEM-KAMGELV 245 starlet sea anemone
EDO42849     166 QKLEASGDEAYEREELKEEKLKFFQEQLKQYEQRYEDAEREALKLERINDTIIIEIDSYKKKKEEILREMDLELVDLN 243 starlet sea anemone
XP_003372651 205 KSLEVSEEKALQREDSYEEQIRLLTQRLKEAETRAEFAERSVQKLQKEVDRLEDELVHEKEKYKAISEELDQTFQELS 282 Trichinella spiralis
P06754       259 KSLEVSEEKANQREEEYKNQIKTLNTRLKEAEARAEFAERSVQKLQKEVDRLEDDLVLEKERYKDIGDDLDTAFVELI 336 fruit fly
Q17H78       174 KSLEVSEEKAMASRDSVEDKIHQLNDKLTNAEARAEFAERSVQKLQKEVDRLEEEVTKEKSKYKAIAAELDLTFADLS 251 yellow fever mosq...
Q6NN28       205 KSLEVSEEKANQREEEYKNQIKTLNTRLKEAEARAEFAERSVQKLQKEVDRLEDDLVLEKERYKDIGDDLDTAFVELI 282 fruit fly
Q60UW4       177 KSLEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKERVRNLTEEIEQTVQEIQ 254 Caenorhabditis br...
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