1M4Y


Conserved Protein Domain Family
Proteasome

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pfam00227: Proteasome (This model is not part of the current CDD release)
Proteasome subunit
The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria. The second is call beta-proteobacteria proteasome homologue (BPH).
Statistics
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PSSM-Id: 513265
Aligned: 152 rows
Threshold Bit Score: 80.7232
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1M4Y_C   1 TTilvvRRNGQTVMGGDGQVTF-GSTvlK-GN-ARKVRKLGEGKvLAGFAGSVADAMTLFDRFEAKLREWGGNLT----- 72  Thermotoga maritima
A0QZ46  24 IArgrsVVALAYSEGVLFVAE---NP-------SRS-LQKVSELy-DRVGFAAVGRFNEFDNLRRGGIQFADTRGyaydr 91  Mycolicibacterium sme...
Q09720   1 MEs---LLAVQGQDFVLTASSS-SAVrgI-TVlKPDD-DKSQIL-NSHNLMLYCGEAGDTTNFAEYIAANISLYTlrhnl 73  Schizosaccharomyces p...
P0CQ12   1 MEc---SFGITGKDYVILASDM-GAGr-S-IVrMKSDENKLKTL-GPHLAMAFSGEPGDTNNFAEYIERNMRLYNirnhf 73  Cryptococcus neoforma...
P91477   1 MHf---LVGISTENYVILAAD--KATfaYgAIlADSENDKEYRL-GKKLTMMCIGEEGDVAQFGDWTKRNLQLYSvrngy 74  Caenorhabditis elegans
Q9LST6   1 MEc---VIGVVGRDFAVVAADT-SAVqsI-LVhKTDE-DKVMVL-DSHKLMGASGEPGDRVQFTEFIQKNLHLYQfrnni 73  Japanese rice
O23714   1 MEc---VFGLVGNGFAIVAADT-SAVhsI-LLhKNNE-DKIMVL-DSHKLVAASGEPGDRVQFTEYVQKNVSLYKfrngi 73  thale cress
Q9VJJ0   1 MEt---LLGIKGPDFVMLAADT-THArsI-IVmKEDQ-NKIHKV-SDSLLISTVGESGDTEQFTEFISKNIALYKmrngy 73  fruit fly
Q9VQE5   3 MEt---ILGIKGPDFVMLASDTmQAK--S-LVfMKDDQSKIHRL-SDFNMMATVGDGGDTIQFTDFISKNLHLYKishgy 75  fruit fly
Q8T8U1   1 MEt---ILGVKGTDFIILASDTmRNK--S-AMwLDDEVRKTHRI-SDYCMMSTAGDGGDCLKFSDFILRNMDLYKitngy 73  fruit fly
1M4Y_C  73 -KAAV--------ELAKDWRTD-RVLRR---LEALLLVADK-ENIFiISGNGEVIQPDDDAAaiGSGGP-YaLAAAKALL 137 Thermotoga maritima
A0QZ46  92 rDVTGrqlanvyaQTLGTIFTE-QAKPYeveLCVAEVAHYG-ETKApELYRITYDGSIADEPh-FVVMGgT-TEPIIAAL 167 Mycolicibacterium sme...
Q09720  74 nLSPEatas-ftrKQLATSLRS-RKPYQ---VNILLAGYET-NLGKpELFWLDYLATCVRVp--YACQGyS-SFYCLSIF 144 Schizosaccharomyces p...
P0CQ12  74 pLLPPaasa-wvrRTLAEAIRS--RHPY---AVNLLLGGFDtTTSKpHLYWIDYLGTKAIVp--YAAHG-MgVYVSLSTM 144 Cryptococcus neoforma...
P91477  75 eVSPScahh-fvrRSIAEGLRS--QDHY---TVDVLIGGYDdKEDKaFLGSVDYLANGLGQQp-YLFRGfCgRF-CYAIM 146 Caenorhabditis elegans
Q9LST6  74 pLSTAat----anFTRGELATAlRKNPY---YVNVLLAGYD-SDVGaSLYYIDYIATFHKIE--KGAFGy-gSYFCLSLM 142 Japanese rice
O23714  74 pLTTAaaan-ftrGELATALRK---NPY---SVNILMAGYD-DESGaSLYYIDYIATLHKVD--KGAFGy-gSYFSLSTM 142 thale cress
Q9VJJ0  74 dLSPResah-ftrKNLAEYLRS--RTPY---QVFMFVAGYD-PNAGpELTFIDYLANALPVn--YAGHGy-gAIFASSIY 143 fruit fly
Q9VQE5  76 hLSAKsaah-ftrKTLADYIRT-NTRYQ---VAMLL-AGYD-AVEGpDLHYIDSYGAAQSIn--HAGHG-WgSMFCGSIL 145 fruit fly
Q8T8U1  74 dLTVRgavhfirrHLSAYLKSD-CT--F---QVSLLVGGYD-LTSGpELHYIDYLGNSVPVr--YGGHG-AaMNFCTPIL 143 fruit fly
1M4Y_C 138 RNTD--LSAREIVEKAMTIAGEICIYtNQ---NIVIEEV 171 Thermotoga maritima
A0QZ46 168 NESYteNASLQDAVEIAVKALSASAEgAEprsLGPSTLE 206 Mycolicibacterium smegmatis MC2 155
Q09720 145 DRYYkpDLTIDEAVRIMKLCFDELKKrMP---IDFKGFI 180 Schizosaccharomyces pombe 972h-
P0CQ12 145 DKWWyeDMDKKEGVDLLRKCIDETEKrLT---IKFDFNC 180 Cryptococcus neoformans var. neoformans JEC21
P91477 147 DREYkkDMTEAEGLALMNKCIGEAKRrFV---ANIPGYK 182 Caenorhabditis elegans
Q9LST6 143 DKLYrpDMSVEEAVDLVDKCIKEIRLrLV---VAPQNFI 178 Japanese rice
O23714 143 DRHYrsDMSVEEAIELVDKCILEIRSrLV---VAPPNFV 178 thale cress
Q9VJJ0 144 DRYWhpNITQAEAYDVFKKCIAEIQKrLV---VNLKNFT 179 fruit fly
Q9VQE5 146 QRYWnsKLSQEDAYSLMKKCVLEIQRrLI---INQRNFE 181 fruit fly
Q8T8U1 144 EEFYkpDMDTQAAYDVIKKCVIELYKrFV---INLRNID 179 fruit fly
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