1UCX,1UCX,2VQA,3S0M,3S0M,2VQA


Conserved Protein Domain Family
Cupin_1

?
pfam00190: Cupin_1 
Click on image for an interactive view with Cn3D
Cupin
This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Statistics
?
PSSM-Id: 395138
Aligned: 63 rows
Threshold Bit Score: 66.9742
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1UCX_A  17 LNALKPDN--RIESEGGLIETWNPNNKP--FQCAGVALSRCTlNRNALRRPSYT-NGPQEIYIQQGKGIFGMIYPGCPst 91  soybean
1UCX_A 304 HNIGQTSSpdIYNPQAGSVTTATSLDFPalSWLRLSAEFGSL-RKNAMFVPHYNlNANSIIYALNGRAL-IQVVNCNG-- 379 soybean
P02858 391 ENIARPSRadFYNPKAGRISTLNSLTLPalRQFQLSAQYVVL-YKNGIYSPHWNlNANSVIYVTRGQGK-VRVVNCQG-- 466 soybean
Q9FEC5 360 ENIADPSHadIFNPRAGRVRTINSLTLPvlKLLRLSAQWVKL-YKSGIYVPHWSmNANSVAYVTSGGGW-VQVVNSQG-- 435 soybean
P07730 319 QNIDNPNRadTYNPRAGRVTNLNSQNFPilNLVQMSAVKVNL-YQNALLSPFWNiNAHSIVYITQGRAQ-VQVVNNNG-- 394 Japanese rice
2VQA_A 204 HNLLGQQP--LVSLGGNELRLASAKEFP--GSFNMTGALIHL-EPGAMRQLHWHpNADEWQYVLDGEMD-LTVFAS---- 273 Synechocystis sp. PCC...
3S0M_A 223 YRLLEQEP---IESEGGKVYIADSTNFKv-SKTIASALVTVE--PGAMRELHWHpNTHEWQYYISGKAR-MTVFAS---- 291 Bacillus subtilis
3S0M_A  45 FSFSDTHN--RLE-KGGYAREVTVRELPi-SENLASVNMRLK--PGAIRELHWH-KEAEWAYMIYGSARVTIVDEKG--- 114 Bacillus subtilis
2VQA_A  22 TYAFSKTP--LVLYDGGTTKQVGTYNFPv-SKGMAGVYMSLE--PGAIRELHWHaNAAEWAYVMEGRTRITLTSPEG--- 93  Synechocystis sp. PCC...
O34767 236 HELLNQPP---IQMPGGSVRIVDSSNFP---ISKTIAAALVQiEPGAMRELHWHpNSDEWQYYLTGQGR-MTVFIGNG-- 306 Bacillus subtilis sub...
1UCX_A  92 feepqqpqqrgqssrPQDRHQKiynFREGDLIAVPTGVAWWMYNNEdTPVVAVSIIDTNSLENQ------------LDQ- 158 soybean
1UCX_A 380 ---------------ERVFDGE---LQEGRVLIVPQNFVVAARSQ--SDNFEYVSFKTNDTPMIgtlagansllnaLPEe 439 soybean
P02858 467 ---------------NAVFDGE---LRRGQLLVVPQNFVVAEQAG--EQGFEYIVFKTHHNAVTsylkd---vfraIPSe 523 soybean
Q9FEC5 436 ---------------KSVFSGA---VGRGRVVVVPQNFAVAIQAG--RDGMEYIVFRTNDRAMMgtlvgptsaitaIPGe 495 soybean
P07730 395 ---------------KTVFNGE---LRRGQLLIVPQHYVVVKKAQ--REGCAYIAFKTNPNSMVshiagkssifraLPTd 454 Japanese rice
2VQA_A 274 -----------------EGKASvsrLQQGDVGYVPKGYGHAIRNSSqKPLDIVVVFNDGDYQSIdlstw----lasnPSs 332 Synechocystis sp. PCC...
3S0M_A 292 -----------------DGHARtfnYQAGDVGYVPFAMGHYVENIGdEPLVFLEIFKDDHYADVslnq----wlamLPEt 350 Bacillus subtilis
3S0M_A 115 ----------------RSFIDD---VGEGDLWYFPSGLPHSIQAL--EEGAEFLLVFDDGSFSEnsvfqltdwlahtPKe 173 Bacillus subtilis
2VQA_A  94 ----------------KVEIAD---VDKGGLWYFPRGWGHSIEGIG-PDTAKFLLVFNDGTFSEgatfsvtdwlshtPIa 153 Synechocystis sp. PCC...
O34767 307 ----------------TARTFD---YRAGDVGYVPSNAGHYIQNTG-TETLWFLEMFKSNRYADvslnq---wmaltPKe 363 Bacillus subtilis sub...
1UCX_A 159 -MPRRFYLAGNQEQ 171 soybean
1UCX_A 440 vIQHTFNLKSQQAR 453 soybean
P02858 524 vLAHSYNLRQSQVS 537 soybean
Q9FEC5 496 vLANAFGLSPEEVS 509 soybean
P07730 455 vLANAYRISREEAQ 468 Japanese rice
2VQA_A 333 vLGNTFQISPELTK 346 Synechocystis sp. PCC 6803
3S0M_A 351 fVQAHLDLGKDFTD 364 Bacillus subtilis
3S0M_A 174 vIAANFGVTKEEIS 187 Bacillus subtilis
2VQA_A 154 wVEENLGWTAAQVA 167 Synechocystis sp. PCC 6803
O34767 364 lVQSNLNAGSVMLD 377 Bacillus subtilis subsp. subtilis str. 168
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap