2PQI


Conserved Protein Domain Family
RIP

?
pfam00161: RIP 
Click on image for an interactive view with Cn3D
Ribosome inactivating protein
Statistics
?
PSSM-Id: 425494
Aligned: 36 rows
Threshold Bit Score: 147.102
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2PQI_A        11 DANYPYSAFIASVRKDVIKHCtdh------kgiFQPVLPPE---KKvp--elWLYTELK-TRTSS----ITLAIRMDNLY 74  Zea mays
5_pfamImport   1 KLSQNYEKCVKDIRAAMDTTDvkftivdggkdtTVPVTp----gEDnt--srGVYVIKItDSQYN----LSLVATKYQAW 70 
EMS65975      32 eMHRSYASQMERLRKHLKK--------------KFKTLMKGkrkfhltpdglaVFTVAFtDGERT----VRAIIEGRHMW 93  Triticum urartu
XP_002516360  52 VDEDVYSAFLNNLRKQLESGTts---------ySIPVLRAQv-aPSsd--qrFVLVKLF-NPERS----TTMAIDVINAY 114 castor bean
EEF30191     103 ATRESYRLFIETLRTELANKHer--------sdGMKVMREPstlLNle--rrILKVELSnSETTS----ATLVLDQEDAY 168 castor bean
EEF33306      46 ATAGSYRLFITSLRNRLATGQdv--------rhGIPVLRDRv-gLPiv--qrFVLVELSnWLQEP----VILALDVTTAN 110 castor bean
XP_015583875  53 ATAESYRDFINAMRSQLLAGDdv--------rhEIPVLQNRv-gLLin--qrFVLVQVTnQAELS----ITLAVDVTNVY 117 castor bean
EEF30196      51 ATAQSYTNFIDAVRSHLTTGDdv--------rhEIPVLRNRv-gLPin--qrFVLVQLSnQAEHS----VTLAMDVTNAY 115 castor bean
XP_002459593  57 ATPDKYKSFIASVRAGLVSTAaeaag--tntsgGIPVLVSEd-dPLal--eaSLNITLVnKAGRS----VSLKMDISGAY 127 sorghum
Q9KZ40        54 dnVPHYRSVVQQLRRGAGHLIhgnni-------------yetmgQGqn--agLVALNLY---NADwvhqTTLYFNASNLY 115 Streptomyces co...
2PQI_A        75 LVGFRTPG--GVWWEFGKDGDTHLLG-------DNPRWLGFGGRY-QDL--IG-----NKGLETVTMGRAEMTRAVNDLA 137 Zea mays
5_pfamImport  71 FRGIVTNN--GGRYEIDKMPTKMM---------KGSTSLHTDGQY-PHLlsGG------DKVEALKVGFHRLLHAFPALA 132
EMS65975      94 VRGFETTD--GQVYEFKEKNQGHETKky----iKGSILLSHGGGY-PTLlrEG------PPLENFEVGYPALKDMLDQLS 160 Triticum urartu
XP_002516360 115 LVGFKVDEtnSYYFNDIVNDVYDANPlk----tTKKTKLPFGGSY-PALenSG------AFREQVPLGITQLNDAVFTLY 183 castor bean
EEF30191     169 VVGYIARDq-SYLLQLDSDKHCFNDGf------TDSIRLPFGFSY-EELekRAg----VQSRREINLGIKELECAIKDLD 236 castor bean
EEF33306     111 VVGFRAGKn-AYFFHPDNPDDAQAIThlf-kdtTQRQTFNFSGNY-SALenQA-----HEERDKIDLGIQPLEEAISSIY 182 castor bean
XP_015583875 118 VVGYRAGNn-AYFFQPDNPEDAEAIThlf-tdsQSRQTFSFGGNY-DRLeqIAsqggrRGRREDIELGIGPMEEAISALY 194 castor bean
EEF30196     116 VVGYRAGNn-AYFFRPDSPEDAEAIThlf-tdaQNPYTFAFGGNY-DRLeqLG------GLRENIELGNGPLEDAISALY 186 castor bean
XP_002459593 128 IAGYEA----GNFSCLVKRS-------------GSGHTLSSVTCYrSSYpwGGpptvdVAVPEVSAWRVEDLDEAISSLF 190 sorghum
Q9KZ40       116 LVGFKSRT--GQAYLFSDASANAREEvgrevrgAPVTTLPFAGSYtSLVntLP-----GAETEPTTIGIYAIQTNMEALA 188 Streptomyces co...
2PQI_A       138 KKKKm----LEPQADT---KSKLVKLVVMVCEGLRFNTVSRTVDAGFNSQHGv-----tLTVTQGKQVQKWDRISKAAF 204 Zea mays
5_pfamImport 133 TLGK-----DENKKVTsehKEALAVLIVMFFEGPRFPDVENLVKHLLTRMEDg-----vVGESNGKLITNWCDTSEN-- 199
EMS65975     161 HFDP-----TKSSVKS---LRAMAALIIHTAESIKNNFICLIVLKSLDPKLGark--qeLTDLGNGYIRSWAKISKLIL 229 Triticum urartu
XP_002516360 184 KYATs----AATANQA---ARSLLVAVQMVSEAARFKYIEQVLVDNFFYLDT-------ERGDLVSLENNWKDLSDAIQ 248 castor bean
EEF30191     237 KTNY-----NDNYKSV---AKSLIVCIQMVSEAARFIYIETKVCDSITEGRKkfyrnfkPDDTMLKLEKDWDKLSDAVQ 307 castor bean
EEF33306     183 LYSLg----QAPLRAL---ASDLIVCIQMVSEAARFGYIEERIGQSITSSTPf-----rPRGRILSYERSWEELSSAIQ 249 castor bean
XP_015583875 195 RYTTg----GVQLPTL---ARSFIVCIQMISEAIRFQYIEGEMRTRIRHSRGs-----aPDPSVITLENNWGRLSTTIQ 261 castor bean
EEF30196     187 YYSTg----RIQLPTV---ARSFIVCIQMISEAVRFQYIEGEIRTRIRHNRRs-----aPDPSVITLENSWGRLSTAIQ 253 castor bean
XP_002459593 191 LFPTg----NATKEDL---SRGLAACDVMVATAATFPYVERRMSAGMWDGNGv-----sNDGSLRGLQESWPDLSAAVQ 257 sorghum
Q9KZ40       189 RTPNpaaatGAYRGSI---ARAMLIMIGAFAEAARFPMFRDHFEAAFRRFANps---vvVTPTMQALRTAWGQMSRWVQ 261 Streptomyces coe...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap