2PQI,1DM0


Conserved Protein Domain Family
RIP

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pfam00161: RIP (This model is not part of the current CDD release)
Ribosome inactivating protein
Statistics
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PSSM-Id: 513203
Aligned: 34 rows
Threshold Bit Score: 142.885
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2PQI_A        12 ANYPYSAFIASVRKDVIKhct------dhkGIfqPVLPPEkkvp------------elwLYTELK-TRTSS----ITLAI 68  Zea mays
XP_044425469  33 MHRSYASQMERLRKHLKK------------KF--KTLVKGkrkfhl-------tpdglaVFTVAFtDGERT----VRAII 87 
2_pfamImport   2 DADAYKKLLEDLRGELEAcrr-------pvAL--HVLPPQtpnpta--------atvdwFDLGLH-TGGFT----ITVRL 59 
XP_008602726  47 GAEGYTKFLEDLRTELAAcrr-------seAL--RVLPPQtlnpta--------etvdwFDLGLH-TGGFT----ITVRL 104
Q9KZ40        55 nVPHYRSVVQQLRRGAGHlihgnniyet----------------------mgqgqnaglVALNLY---NADwvhqTTLYF 109 Streptomyces co...
Q32GM1        31 TAKTYVDSLNVIRSAI--------------GT--PLQTISsggtsllmidsgtgdnlfaVDVRGI-DPEEGrfnnLRLIV 93  Shigella dysent...
XP_011121873  16 gARAYLNLIVDLRRSAAAgdr------vvhGL--GVLPAEtanp------------adfIDVGLK-TTTNL----ITVRL 70 
EMR66115      17 GADSYIQNIQQLRRELAVgdy-------ieSV--GTLAPQvppgg----------tlefFDIVLSyTDDHGtthtLTVRL 77 
XP_008599340  77 TKEVYKNFIERIRRRVQDsgv------sshGR--PVLPPQrmpp------------tswFDIVLR-TQSQA----VRLRI 131
XP_048530812  11 LSDSYATFISTLRSKLPSpnadtvgekkgkQR--PVLAKQtgadk---------ppprwIHVELKgKGGAA----PKVAI 75 
2PQI_A        69 RMDNLYLVGFRTPG-G--VWWEFGKDGDTHLLG-------DNPRWLGFGGRY-QDL--IGnKGLETVTMGRAEMTRAVND 135 Zea mays
XP_044425469  88 EGRHMWVRGFETTD-G--QVYEFKEKNQGHETKky----iKGSILLSHGGGY-PTLlrEG-PPLENFEVGYPALKDMLDQ 158
2_pfamImport  60 QADNLYLLAYRVEGfAnpEWRALADAGPLV----------PGSRALPGGFTY-SRLetQAdLRRPELPLGLGAFRGAASY 128
XP_008602726 105 RADNLYLLGYRVEPfAnsNWRAFSDAQRLV----------TGSTALPGGFTY-SRLetQAgLRRPELPLGLSALRGAVSY 173
Q9KZ40       110 NASNLYLVGFKSRT-G--QAYLFSDASANAREEvgrevrgAPVTTLPFAGSYtSLVntLPgAETEPTTIGIYAIQTNMEA 186 Streptomyces co...
Q32GM1        94 ERNNLYVTGFVNRTnN--VFYRFADFSHVTFPG-------TTAVTLSGDSSY-TTLqrVAgISRTGMQINRHSLTTSYLD 163 Shigella dysent...
XP_011121873  71 RRDNLYLIGYLPSYrT--RWYEFSDTHLI-----------QGSEALPHDGHY-TTLekKAnASRRDIALGFGPTEGAVNA 136
EMR66115      78 RTDNLYLVAWRRPNtT--VWYELGHESGGAATIvd---pgATTQLLSLRESY-VALerVAgWRLQDIPLSARRIGEAIRT 151
XP_008599340 132 RSDNLYLDGYRAEDsD--QWFEFGVANVDPQLI-------DGSTHLGFDGGY-NSLqtTAaRRRSETALGQQQLTTAVNQ 201
XP_048530812  76 RSDNVYIFAFTNAG-G--KWFKLTKGKTSVL---------PDATPLGFDGHY-TTLvgGA-TNLSTLKLGKYTTSEAAGT 141
2PQI_A       136 LAKKKKm----LEPQADT---KSKLVKLVVMVCEGLRFNTVSRTVDAGF-NSQHGVT---LTVTQGKQV-QKWDRISKAA 203 Zea mays
XP_044425469 159 LSHFDP-----TKSSVKS---LRAMAALIIHTAESIKNNFICLIVLKSL-DPKLGARkqeLTDLGNGYI-RSWAKISKLI 228
2_pfamImport 129 LATHLQdp-rnQDEKKAL---AKSLLVLVQMLSEALRFRVIGDHVAAEG-AQ--------ITERMARLE-NDWADISEAV 194
XP_008602726 174 LATHPQdp-snEEEKKSL---AKALLVVVQMLCEAMRFRLIGDHVAAES-AQ--------ITERMTRLE-NDWADISEAV 239
Q9KZ40       187 LARTPNpaaatGAYRGSI---ARAMLIMIGAFAEAARFPMFRDHFEAAF-RRFANPSv-vVTPTMQALR-TAWGQMSRWV 260 Streptomyces co...
Q32GM1       164 LMSHSG-----TSLTQSV---ARAMLRFVTVTAEALRFRQIQRGFRTTL-DDLSGRSy-vMTAEDVDLT-LNWGRLSSVL 232 Shigella dysent...
XP_011121873 137 LAQKGA--------PSSVeihARSLIILIEAISEAMRSTVACEFIRSKW-ELGTAEK---PTLRIVTLE-NSWDPISKAI 203
EMR66115     152 LATTEV------NSSTDLtpiARSVLTLSFTLAEATRLRSISALIETAWwNESS------PGEHYTSQV-RSWGRLSNAV 218
XP_008599340 202 LATTAD--------RRER---ARSLLVVIQMICEAIRFTHISDTITNNY-SEGVT-----PDERFTALE-NGWGDVSTAL 263
XP_048530812 142 LWNHNNk----SYVNADL---KKAVATLCVVLSEAARLTPVYDAVITGW-DEPAGVS---IAGTIVKNFiTNWGDLSKAL 210
2PQI_A       204 F 204 Zea mays
XP_044425469 229 L 229
2_pfamImport 195 L 195
XP_008602726 240 L 240
Q9KZ40       261 Q 261 Streptomyces coelicolor
Q32GM1       233 p 233 Shigella dysenteriae Sd197
XP_011121873 204 M 204
EMR66115     219 Q 219
XP_008599340 264 L 264
XP_048530812 211 L 211
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