1B5L,3SE4,3OQ3,1AU1,3WCY


Conserved Protein Domain Family
Interferon

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pfam00143: Interferon (This model is not part of the current CDD release)
Interferon alpha/beta domain
Type I interferons (alpha, beta) belong to the larger helical cytokine superfamily,which includes growth hormones, interleukins, several colony-stimulating factors and several other regulatory molecules.
Statistics
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PSSM-Id: 513185
Aligned: 96 rows
Threshold Bit Score: 109.979
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1B5L_A         3 LSRKLMLDARENLKLL-DRMN---RLSPHSCLQDRKDFGL-PQEMV--EGDQL-QKDQAFPVLYEMLQQSFNLFYTEHSS 74  Komagataella pa...
6_pfamImport   1 LHIHLRRITWQNVELL-TNMS---KSLPLECLRENKAFEL-PREVL--AYSQPlLHRDIKGTFYEMYMLAFSIFTQSTFQ 73 
5_pfamImport   1 LRHQDANFSWKSLQLL-QKAA---PPPPQNCPQQDVTYPF-PETVL--ESK---DKKQAAIITLHILQQLFNILSSPHTP 70 
XP_019217734  26 MDEKFRQHNEETLNLL-DTMVy-nSTNTTEDAEVEVTVAF-PNHLYr-QASKA-SAEDKLAFTVQVLEEVAALFEEDHSS 100
XP_012808078  27 LHPKQEYLNTQILKAF-NEMMp-lKETEEICEEHPTDLPN-TESTY--SVSQV-EA--GALAVREVLNETMRFYMKHHES 98 
2_pfamImport   1 LRKHLLDDNKENLAVLkSQLG---SVFPLQCLNDVISFSSqPEEENiqSIFEL-QKENAAVALHEILQQILCLYIQNHTK 76 
3_pfamImport   1 LRSRLRQASQVYLELLnSKMNstiSTIPQQCFEDVFNFS--PKMYL--KNLDVsEEENAKVVIQEVLQQTGHIFRQNYTE 76 
4_pfamImport   1 LLTRLREANQANLDVLhRNMG---PSISQQCIDDVFSFSH-REALG--NINVS-EEGNAKAAIQEVLQQTGHIFKQNYTE 73 
XP_008101702  28 LCSWLRQANQANLELLnSKMG---STIPQQCIEDVFSFS--PKEDL--RNLDVsEEENAKVAIQEVLQQTGHIFRQNRTE 100
EHB11333      27 QNVRLSTVTKENVRLL-SSVS---NPLPLRCLREIKAFGL-PQNIL--SYSQH-VERDIKEVFYDIIIQAFNIFSRHTSD 98 
1B5L_A        75 AAWDTTLLEQLCTGLQQQLDHLDTCRGQVMGEEDS--ELGNMD-----------PIVTVKKYFQGIY-DYLQEKGYSDCA 140 Komagataella pa...
6_pfamImport  74 STGEEKHLGQIQTGLDRQLQYLEQCLKEE-KGNEDkeEMEEDErrhpgartpqpSNLELRRYFHRIS-SFLQDKQYSHCA 151
5_pfamImport  71 AHWIDHAHHSLLNQMQHYIHHLEQCFVDQGTRSQKqgPRN--------------SHLSINKYFRSIH-NFLQRNNYSACS 135
XP_019217734 101 ASWEDSTVRNFLNIVNKQAEELHSCIGSHSHKKKN------SQ-----------LYFKTEMYFKRLSdDVLKKKGHSVEA 163
XP_012808078  99 MGCKQQAWERFQQLLYYQIHQLEACVSQTEENDLLk--------------------eSISEEFNLLE-TMVLEKDNSACV 157
2_pfamImport  77 LPWDENSIGILKVGLKQEIAKLTPCLSEDKQEIRE----------------------DVKKYFERIH-TFLKDGEYNECA 133
3_pfamImport  77 MPWDEDSLRVFHAGLDQQSENLKSCLSESPRSQRI------QL-----------TRLKVKKYFRSLS-DLLKEKGYSRCA 138
4_pfamImport  74 MPWDEDSLRAFHAGLDQQSENLKSCLSASPRIQLT--------------------RLRVKKYFRSLS-NLLKEKEYSRCA 132
XP_008101702 101 MLWDEDSLRAFHAGLDQQSENLKSCLSASPRSQRI--QLTS---------------LRVKRYFRSLN-DFLKEKEYSRCA 162
EHB11333      99 STWKEEYLTQIKSELAEQREYLEQCLKEEKKENKGmqEMKTHElehsgvqvvqqSKLALRGYFQRIE-NYLKDKKYSYCA 177
1B5L_A       141 WEIVRVEMMRALTVSTTLQKRL 162 Komagataella pastoris
6_pfamImport 152 WKIVQVEIRRCFYYFQTLIELL 173
5_pfamImport 136 WDHVRLHARTCFQNVDTLIQQM 157
XP_019217734 164 WEVIRKETKAHLMRAEQLASSL 185
XP_012808078 158 WDFIHLETRRNLQQVLQLSSRL 179
2_pfamImport 134 WEVAQIEVSRFFMVMEQLIRTL 155
3_pfamImport 139 WEIVHIQVKES---SSVLGWKL 157
4_pfamImport 133 WEIIQIQVKQCFLWIEKIIQEI 154
XP_008101702 163 WEIVQIQVKQCFLWIEKLIQMI 184
EHB11333     178 WKIVQVEIKRCFFYFLKFIKLP 199
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