1AU1,3WCY


Conserved Protein Domain Family
Interferon

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pfam00143: Interferon 
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Interferon alpha/beta domain
Statistics
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PSSM-Id: 425484
Aligned: 99 rows
Threshold Bit Score: 109.978
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1AU1_B          6 LGFLQRSSNFQCQKLL-WQLN---GRLE-YCLKDRMNFDI-PEEIK--QLQQF-QKEDAALTIYEMLQNIFAIFRQDSSS 76  human
XP_021588023   69 LEVHLDMSTSENLMLL-TNLS---NSIPvQCFREIHNFEL-PEEIL--SSTQP-EKTNIKYVFYETYTQAINIFSQNTFN 140 thirteen-lined...
5_pfamImport    1 LRKHLLDDNKENLAVLkSQLG---SVFPlQCLNDVISFSSqPEEENiqSIFEL-QKENAAVALHEILQQILCLYIQNHTK 76 
1_pfamImport    1 LRSRLRQASQVYLELLnSKMNstiSTIPqQCFEDVFNFS--PKMYL--KNLDVsEEENAKVVIQEVLQQTGHIFRQNYTE 76 
XP_008101700   28 LLTRLREANQANLDVLhRNMG---PSISqQCIDDVFSFS--HREAL--GNINVsEEGNAKAAIQEVLQQTGHIFKQNYTE 100 green anole
XP_008101702   28 LCSWLRQANQANLELLnSKMG---STIPqQCIEDVFSFS--PKEDL--RNLDVsEEENAKVAIQEVLQQTGHIFRQNRTE 100 green anole
XP_019217734   26 MDEKFRQHNEETLNLL-DTMVy-nSTNTtEDAEVEVTVAF-PNHLYr-QASKA-SAEDKLAFTVQVLEEVAALFEEDHSS 100 Nile tilapia
OCA21056       27 LHPKQEYLNTQILKAF-NEMMp-lKETEeICEEHPTDLPN-TESTY--SVSQV-EA--GALAVREVLNETMRFYMKHHES 98  tropical clawe...
11_pfamImport   1 LEHQLGNINEKSIQAL-KEMG---GGFPvECVSQIIT-TF-PVDAF--KTAENaKNEDIVLTGLETMRCVHNIFNKTGHP 72 
XP_019465862   49 LRHQDANFSWKSLQLL-QKAA---PPPPqNCPQQDVTYPF-PETVL--ESK---DKKQAAIITLHILQQLFNILSSPHTP 118 turkey
1AU1_B         77 TGWNETIVENLLANVYHQINHLKTVLEEKLEKEDF--TRGKLM----------SSLHLKRYYGRIL-HYLKAKEYSHCAW 143 human
XP_021588023  141 SSWDEEQLVQLQSNLYEQVEYLKQCWGKENKEKED--VKADEKkhseagvlplGNLKLRRYFSRIY-NFLKDKTYSRCAW 217 thirteen-lined...
5_pfamImport   77 LPWDENSIGILKVGLKQEIAKLTPCLSEDKQEIRE---------------------DVKKYFERIH-TFLKDGEYNECAW 134
1_pfamImport   77 MPWDEDSLRVFHAGLDQQSENLKSCLSESPRSQRIq----------------lTRLKVKKYFRSLS-DLLKEKGYSRCAW 139
XP_008101700  101 MPWDEDSLRAFHAGLDQQSENLKSCLSASPRiq-------------------lTRLRVKKYFRSLS-NLLKEKEYSRCAW 160 green anole
XP_008101702  101 MLWDEDSLRAFHAGLDQQSENLKSCLSASPRSQRIq----------------lTSLRVKRYFRSLN-DFLKEKEYSRCAW 163 green anole
XP_019217734  101 ASWEDSTVRNFLNIVNKQAEELHSCIGSHSHKKKN------SQ----------LYFKTEMYFKRLSdDVLKKKGHSVEAW 164 Nile tilapia
OCA21056       99 MGCKQQAWERFQQLLYYQIHQLEACVSQTEENDLLk-------------------eSISEEFNLLE-TMVLEKDNSACVW 158 tropical clawe...
11_pfamImport  73 ATWEISELERFQGLLYRQIRQLTLCAGSEMKFSGEpnRLGVSV-------------VLKTSFAKLE-KVLRDKDYSYCAW 138
XP_019465862  119 AHWIDHAHHSLLNQMQHYIHHLEQCFVDQGTRSQKqgPRN-------------SHLSINKYFRSIH-NFLQRNNYSACSW 184 turkey
1AU1_B        144 TIVRVEILRNFYFINRLTGYL 164 human
XP_021588023  218 EIVRVEITRYFLYLKKFITLH 238 thirteen-lined ground squirrel
5_pfamImport  135 EVAQIEVSRFFMVMEQLIRTL 155
1_pfamImport  140 EIVHIQVKYHLSASSVLGWKL 160
XP_008101700  161 EIIQIQVKQCFLWIEKIIQEI 181 green anole
XP_008101702  164 EIVQIQVKQCFLWIEKLiqmi 184 green anole
XP_019217734  165 EVIRKETKAHLMRAEQLASSL 185 Nile tilapia
OCA21056      159 DFIHLETRRNLQQVLQLSSRL 179 tropical clawed frog
11_pfamImport 139 ESVRRDLRRALEQFQEFLESN 159
XP_019465862  185 DHVRLHARTCFQNVDTLIQQM 205 turkey
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