3WFB,3EH4,2YEV


Conserved Protein Domain Family
COX1

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pfam00115: COX1 
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Cytochrome C and Quinol oxidase polypeptide I
Statistics
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PSSM-Id: 425471
Aligned: 622 rows
Threshold Bit Score: 77.9973
Created: 16-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3WFB_B                  14 AVAKPYFVFALILFVGQILFGLIMGLQYvvgdflfpaiP------------FNVARMVHTNLLIVWLLFGF-MGAAYYLV 80  Pseud...
WP_013743220            98 YVTFVFLSCAVVWLIFASTAGLISSIKL----------HqpdfltgyawltFGRIRTVHLNAVAYGWAPMAaFGIAIWTL 167 Pusil...
Q1LF89                  73 pVVFLFICCAMVWLLVASVAGLTASIKL----------HepdllasvpwlsFGRIRTIHLNAVAYGWAPMAgLGIAMFLL 142 Cupri...
Q8XR68                  94 lVVFVFLCSAMVWLLVASLAGLTASLKL----------HlpdalatqawlsFGRIRTIHLNAVAYGWAPMAgLGIAQFVL 163 Ralst...
Q2S5R3                  31 wPVIAFVVSGTFWLVAGSLLALIASFKF----------QfpdwwthqawltFGRVRPAHLNTMIYGWISMAgVGVSSWLW 100 Salin...
PRJNA63271:OPIT5_22615  34 aPAIFFLGSAVLWLLVGTLYALIASIKL----------HqphflgniewlsFGHARTVHLNTVIYGWATNAaIAVSFWLM 103 Opitu...
jgi:Caka_0025           35 taSIFFTVSAVLWLMIGTIFALIAAFKM----------HqpdfvsatefttFGRMRSAHLNAMALGWGNNIiFAVCLWIM 104 Coral...
WP_013563280            48 lPVLVYFASALFWLIMGSVLAILASIKL----------HapwffdeaswltFGRVRPAHLNTMAYGWASMGsVATALWLT 117 Isosp...
WP_015831040            51 tpVLFGFVIALLWLMVGTWLGDISSFKF----------DwpdllvseayltFGRLRPAHLNVMVYGWASNAmFAVALWIM 120 Methy...
Q1H1D5                  37 qPVLLGFFISIVWLLIGTVMGDISSFKF----------DrpdflseqayltFGRIRPAHLNAMVYGWASTAmFSVSLWLM 106 Methy...
3WFB_B                  81 PEE-SDCELYSPkLAWILFWvfaaAGVLTILGyLLVPYaglarltgnelwpTMGrEFLeQPTISKAGIVIV----AlgFL 155 Pseud...
WP_013743220           168 PRLlKTELMGGR-FALLGAMlwnaALIAGLGS-IAAGF-------------NDGlEWL-EIP-WQIDILFVvggaL--IG 228 Pusil...
Q1LF89                 143 PRLlKTELMGGR-WAVLGAAlwnaGLIAGIGS-IAAGI-------------SDGlEWL-EIP-WQVDILFViggaF--VG 203 Cupri...
Q8XR68                 164 PRVlKTPLVGGN-FAVLGAMmwnaGVVAGLGS-IAVGL-------------SDGlEWL-EIP-WQIGVLFAvggaL--VG 224 Ralst...
Q2S5R3                 101 ARLlKTKLRGRG-LLLLSAAlwnvGVLVGTIG-ILAGY-------------SRAiEWV-EMP-YVAFAFIVpamgL--LV 161 Salin...
PRJNA63271:OPIT5_22615 104 ARLsRSTIRHSG-LLFIAGAfwniGVTIGVIG-IMRGD-------------SNAiEWL-EMP-SYATPLLFvayaL--IG 164 Opitu...
jgi:Caka_0025          105 ARLcRSPIRHGG-LLLIAGAfwnvGLTVGIAG-IIKGD-------------ITSvEWL-EIP-RYASPLLAisyiL--VG 165 Coral...
WP_013563280           118 ARLtRAPLAYPR-LVAGSAIlwnlGLLAGAIG-ILTGS-------------STSvEWL-ELP-PWSAPPIAaafvI--VS 178 Isosp...
WP_015831040           121 PRLcHTRLHWQR-VALAGIAiwnmGVFMGVLL-LLLGT-------------SDGlEWL-EFDRYSADPMMVagalL--VG 182 Methy...
Q1H1D5                 107 PRLcRTQLRWAG-AAVAGILiwtlGLVIGLVL-LLAGY-------------SDGlEWL-ELDRVWADPLLVvgasL--VG 168 Methy...
3WFB_B                 156 FNVGMTVLRgrktAISMv------lMTGLIGLALLFLFSFYNPenl-----trDKFYWWWVVHLWVeGVWELIMGAILAF 224 Pseud...
WP_013743220           229 LPLVFTLQN----RKVEhlyvsiwyMGAALFWFPVLFLVGNLPgvhf---gveGATMNWWFGHNVLgLFYTPVALASVYY 301 Pusil...
Q1LF89                 204 FPLVLTLVN----RKVDhlyvsvwyMGCALFWFPVLFLVANIPglhf---gveQATMNWWFGHNVLgLFYTPLALASIYY 276 Cupri...
Q8XR68                 225 IPLVLTLLA----TRVShlyvsvwyMGCALFWFPVLYLVAKVPyvhf---gveQATMNWWFGHSVLgLFYTPLALASIYY 297 Ralst...
Q2S5R3                 162 VSFVRTLWH----RHARhlyisvwyLGAAILWGP-LLVIAILLpiys---gvpEATANWWYAHNILgLWITPPGLAAAYY 233 Salin...
PRJNA63271:OPIT5_22615 165 AWAIITFRF----GKSRhiyvsqwyILAALFWFPWLYSIAQIMlvfspargtvQSLVNWWFAHNVLgLWFTPIGLGSVYY 240 Opitu...
jgi:Caka_0025          166 IWGIMAFHF----RKGEhvyvsqwyFLGALFWFPWLYVVAQLMiiwvpaqgvvQSVTNWWFAHNVLgLWLTPMALGTAYY 241 Coral...
WP_013563280           179 VSAFVTFAR----RTEKhvyvslwyILAAVLWFPWLYTAANLMmfsqpvsgvpLATLNWWYAHNALgLWFTPVGLAAAYY 254 Isosp...
WP_015831040           183 MSVWKTLLA----RKVHhlyvsvwyVSASFPWFVIIFTAGNLPlyq----gveSAAVNWFYAHNALgLWLTTINLGLIYY 254 Methy...
Q1H1D5                 169 ASIWKTLSV----RNVHhlyvsvwyVAASYPWFAIIFIAGNLPifq----gveSAAVNWFYAHNALgLWLTTVNLGLIYY 240 Methy...
3WFB_B                 225 VLVKITGvdREVI-EKWLYVIIAMALISGIIGTGHHYFWIGVpgYWLWLGSVFSALEPLPFFAmvlfafntinrrrrdyP 303 Pseud...
WP_013743220           302 FLPKIIG--RPIQsYNLSLLGFWALAFFYGQVGGHHLVGGPIpsWLVTLSIVQSMMMIVPVLAfsvnqhlt-mrhhfktL 378 Pusil...
Q1LF89                 277 FLPKIIG--QPVRsYGLSLLGFWALAFFYGQVGGHHLVGGPVpgWLITLSIVQSMMMLIPVIAfsinqhqt-lrghfrqL 353 Cupri...
Q8XR68                 298 FLPKIIG--KPIQsYGLSLLGFWTLAFLYGQVGGHHLVGGPVpgWLITLSIVQSMMMLIPVVAfsvnlhqt-mrghfkaL 374 Ralst...
Q2S5R3                 234 LIPKVIG--RPVHsYHLSYLGFWTLALFYNWAGVHHLVGGPApqWVATVSIVFSAMMIIPVIVvavnhhlt-vvghfkkL 310 Salin...
PRJNA63271:OPIT5_22615 241 FLPKVLG--KPIHsYYLSILGFWSLALFYNWAGVHHLIGGPVpvWVQSCGIVASLMMTVPVIVtginhhmt-mvgsfgkL 317 Opitu...
jgi:Caka_0025          242 LIPKVLG--RPIYsYYLSVLGFWSLALFYNWAGVHHLIGGPVpvWLVSAGIVASVMMVIPVVVvginhhms-ivgfhkeG 318 Coral...
WP_013563280           255 LIPKVIG--RPIYsYALSVIGFWSLALFYNWNGGHHLIGGPVpaWLVTVSIVASVSMIIPVIAvainhhmt-mtshfsvL 331 Isosp...
WP_015831040           255 LMPKILG--RPVYsYWLSLIGFWGLALFYALNGMHHLIGGPMpsWMIATSITASILMVIPVVAvginqhmt-vvgrfgaM 331 Methy...
Q1H1D5                 241 LLPKIIG--RPIYsYWLSLIGFWGLALFYALNGMHHLIGGPLpsWMIATSITASIMMVIPVVAvginhhmt-vvgrfgaM 317 Methy...
3WFB_B                 304 nRAVALWAMGTTVMAfLGAGVWGFMHTLAPVNYYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAM-------------Pr 370 Pseud...
WP_013743220           379 iYSPTLRFIVLGGMMyTLSSVQGSFEALRSINTVTHFTHFTVAHAHLGLYGFFSLVMFGAIYFVMprvmswewpypklI- 457 Pusil...
Q1LF89                 354 iESPTLRFVTFGGMMyTLSSIQGSFEALRAVNRVTHFTHYTVAHAHLGLYAFVSFAFFGAIYFIVpritgrewpyrwmI- 432 Cupri...
Q8XR68                 375 lYSPTLRFVTFGGMMyTLSSVQGSFEALRSVNVITHFTHYTVGHAHLGLYAFVSFVFFGSIYFIVpritqrewpypslI- 453 Ralst...
Q2S5R3                 311 kYSPTLRFVVFGAMSyTAVSLQGSLQSFRYWQEVTHFTHYTIAHAHLGVYAFATMIAFGAIYYIMprvtnwewgskrlV- 389 Salin...
PRJNA63271:OPIT5_22615 318 kSSPTLRFIVFGAVNyTLVSLQGSAMSLRSWAEITHFTQFTIAHAHWGMYAFFTMVMFGAIYYIMprlvlkewpsaklI- 396 Opitu...
jgi:Caka_0025          319 wRSPTIRFVVFGAINyTFVSLIGSAMALRDVNLVTHFTHFTVGHAHHGAYAFFAMIMFGGVYYMMprmlkrewpsatlI- 397 Coral...
WP_013563280           332 kRSPTLRFVVFAAVAyTLTSLQGSMEALREVNRITHFTHYTIGHAHLGLYGFVTMMLFGTMYYAVprltgrewasataA- 410 Isosp...
WP_015831040           332 rYSPALTLLVLAAMAyTAVSLQGIMTALVNINRVTHFTHWTIAHSHLGLYMFVTFSLFGGIYYILpkilqrewpsaalI- 410 Methy...
Q1H1D5                 318 rYSPALTLAVIAAMSyTAVSLQGILTALVSVNRITHFTHWTIAHSHLGLYMFVTLSLFGGMYYILprvlkkewpstrlI- 396 Methy...
3WFB_B                 371 lrgigeamdnrsqvleMWGFWLMTVAMVFITLFLSAAGVLqVWLQRMP--------Adga-amTfmatqdQLAIFYWLRE 441 Pseud...
WP_013743220           458 ----------------ALHFWLVVLGFGIYFVGLSIGGWLqGVAMLDAs-------L------PfmesvrVTIPYLESRT 508 Pusil...
Q1LF89                 433 ----------------YCHFWLAAGGICVYFVSLTIGGWLqGMAMLDAa-------R------PfmdsvqVTIPYLKARS 483 Cupri...
Q8XR68                 454 ----------------TAHFWCAAIGIGIYFVALTIAGTLqGLTMLDAs-------R------PfidsvtVTVPYLEARS 504 Ralst...
Q2S5R3                 390 ----------------SLHFWTTGLGIGAYVTALTIGGVIqGLQLLDPd-------V------AfltiveDTKPWLVVRS 440 Salin...
PRJNA63271:OPIT5_22615 397 ----------------SIHFWATAIGILAYVIGLSWGGILqGILTNAPklaeslgmQegtdpvAfietvkvtlpwlefrt 460 Opitu...
jgi:Caka_0025          398 ----------------QIHFWGSGLGILVMVFALQIGGWIqGLEMNNAe-------I------SfletvqNTMPWLKARS 448 Coral...
WP_013563280           411 ----------------RLHFWTCALGVVLYVGALSIGGWIqGMMLNDAe-------T------PfmkiveTTIPYLQARS 461 Isosp...
WP_015831040           411 ----------------RAHILLIVAGMVLYVVALGIGGVLqGLSLLDAs-------Q------SfqasveAAKPWLLTRS 461 Methy...
Q1H1D5                 397 ----------------RMHILLTGGGMVLYVVVLGIGGVLqGLSLLAPg-------Q------GfeasvaSTRPWLLLRS 447 Methy...
3WFB_B                 442 GAG 444 Pseudomonas aeruginosa PAO1
WP_013743220           509 VGG 511 Pusillimonas sp. T7-7
Q1LF89                 484 VGG 486 Cupriavidus metallidurans CH34
Q8XR68                 505 VGG 507 Ralstonia solanacearum
Q2S5R3                 441 VSG 443 Salinibacter ruber DSM 13855
PRJNA63271:OPIT5_22615 461 ysg 463 Opitutaceae bacterium TAV5
jgi:Caka_0025          449 ISG 451 Coraliomargarita akajimensis DSM 45221
WP_013563280           462 VAA 464 Isosphaera pallida
WP_015831040           462 VAA 464 Methylovorus glucosotrophus
Q1H1D5                 448 VAA 450 Methylobacillus flagellatus KT
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