4NBQ,4AM3,6FBL,2CTJ,2BA0,2Z0S,4BA1,2DGR


Conserved Protein Domain Family
KH_1

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pfam00013: KH_1 (483999 is an unknown moldel)
KH domain
KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause paraneoplastic opsoclonus ataxia.
Statistics
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PSSM-Id: 483999
Aligned: 738 rows
Threshold Bit Score: 27.6012
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4NBQ_B          577 YVTxki-npeKIRDVIGKGGVVIREIT-EaT-NCA-IDiSd--dG-------------TIKI--AAhTTEEGEAAKRRIE 635  Coxiella bu...
A0CQB4          111 LEIimlipegTVSYVIGTQGKQIEHIK-LeT-KAH-LViN----Qpiye-----fklrTVTI--IG-K--CYFNIIGESS 173  Paramecium ...
A0CWS9          111 FEMmmlipegTVSYLIGTSGKQIKNIQ-QeT-KTD-VVvN----Naink-----fslrSVKI--VG-QANCIFNAIKLIT 175  Paramecium ...
Q23DM7          115 FTAiclvpngMVSLVIGIKGKQINQIM-NeS-NTK-VVaN----Qpink-----mtsrTIRI--DG-EYKKVAVAIKLIY 179  Tetrahymena...
A0BMW1          107 INIillipegIVSFLIGSKGSQLAKII-EeT-NAK-ITvN----Qpian-----ysprTVKI--VG-DQSTINCAIKAIT 171  Paramecium ...
XP_002174831   1066 QTTtev-pkaLAQRLL------QSNILrN-AySRHhVYvDr--pHkmea------gktTIAV--IAdEEE-AEYPWKLVR 1126
149_pfamImport    1 TLEvvi-pqqHHRALMGTKGHKVQRIN-Q-DfNVH-VKfPe--rEsrdre---plengEAAV--NGeVAE-VAPEEGKVR 68  
XP_002901194    500 RSVfvt-sryLIAILMASKRERLSGIE-T-SsGCK-LHlPppprEgaarss--esesdQVKIslTGsLES-IQKAKEQLE 572 
Q7RIU3          724 SVEvai-nerVIALLLSAKAQKIKEIE-KdT-YTS-IQiNk--tNy------------IAQI--YGhEDN-IYLAKDVLE 782  Plasmodium ...
XP_001466366    183 SIEvei-pteRIKYLLGSQGNNMKFIN-E-TcGTY---------NerfdhvdekeetfTIRI--LGgSEEAVNKAKDMLL 248 
4NBQ_B          636 E 636  Coxiella burnetii RSA 493
A0CQB4          174 R 174  Paramecium tetraurelia
A0CWS9          176 N 176  Paramecium tetraurelia
Q23DM7          180 Q 180  Tetrahymena thermophila SB210
A0BMW1          172 K 172  Paramecium tetraurelia
XP_002174831   1127 E 1127
149_pfamImport   69 K 69  
XP_002901194    573 E 573 
Q7RIU3          783 N 783  Plasmodium yoelii yoelii
XP_001466366    249 L 249 
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