1J5K,1X4N,1WVN,1WE8,2ANN,2ANN,2CTE,3VKE,1DTJ,2JZX,5WWX,2N8L,2CTM,2CTJ,2CTK,6QEY,6QEY,4AM3,7OGK,5YJJ,4NBQ,3U1K


Conserved Protein Domain Family
KH_1

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pfam00013: KH_1 (This model is not part of the current CDD release)
KH domain
KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause paraneoplastic opsoclonus ataxia.
Statistics
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PSSM-Id: 513065
Aligned: 757 rows
Threshold Bit Score: 29.9044
Created: 12-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1J5K_A          15 TTQvtipkdLAGSIIGKGGQRIKQIRHeSGASIKiD-EPLegsEDRIITITG-TQDQIQNAQYLLQN 79   human
88_pfamImport    1 FERvnipkiYHPFIVGPHSENVNKMMEeTGAKINiPpPSV---QKDEIIITG-EKEGVLQAKARIEA 63  
XP_002074745   245 SDRfsvpkiYHPFIVGPYNENLNKLQEeTGAKINvPpQQV---QKDEIIISG-EKDAVAAAKAKVEA 307 
P81021         223 VERldvekvYHPFIAGPYNKLVSELMQdTGTRINiPpPSV---NKTEIVFTG-EKEQLAQAVARVKK 285  chicken
59_pfamImport    1 TEHivcpknLVPFVRGPHNEIYDRLTA-TGVKVNiPpPTA---TNEVISVTG-EKEGVLRAAAEIRK 62  
EDO37476       203 FERlaipktFHPFISGPNNETANRIKEqTGAAINiPpPSV---NKDELTVAG-EKDGVAQAKAMILE 265 
Q17832         420 IEKvkvhptLHRHVIGRGGSLISKIKDqHGVQITiPnEET---NSDEIVVEG-KKEGVKKAVTEIRA 482  Caenorhabditis elegans
XP_001747904   763 KEDvtvpqkLHPFISGPNGSSVRGIQDeYEVSIRvPfPKE---KSDTITVSGpSEN-VPKAVAKLKQ 825 
XP_683005      221 VERlcfekaFHPFIAGAYNRLVQELSQeTGARISiPpPSI---PKDEIVITG-EKEAVAMAIARIRA 283  zebrafish
XP_001747904   335 NIDlpvlkaYHPLLAGYERCNVNRIMEtTGVKIFiPsPNV---DRDEIGVSG-EKEAVQEAVRQLQA 397 
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