1PZ3,2VRQ,2C7F


Conserved Protein Domain Family
Alpha-L-AF_C

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smart00813: Alpha-L-AF_C 
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Alpha-L-arabinofuranosidase C-terminus
This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.
Statistics
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PSSM-Id: 214830
Aligned: 76 rows
Threshold Bit Score: 109.269
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1PZ3_A    293 DEWNVWyhsneadkliepwtvapplledIYNFEDALLVGCMLITLMKHADRVKIACLAQLVNVI-----A-----P---- 358 Geobacillus stearo...
AAO92261  464 SEYAVtgk-----------------dagTGSLLASLAEAAFLIGLEKNSDIVDMASYAPLFVNTndrrwN-----P---- 517 thale cress
NP_197984 463 SEYAVNkad-----------------aknGNLLAALGEAAFLLGLEKNSDIVEMVSYAPLFVNT-----NdrrwiP---- 516 thale cress
BAD30073  455 SEYAVtpke----------------dagTGSLLAALAEAGFLLGLERNSDIVEMASYAPLFVNTndrhwN-----P---- 509 carrot
AAP97437  460 SEYAVtgk-----------------dagRGSLLAALAEAGFLIGLEKNSDIVEMASYAPLFVNThdrrwN-----P---- 513 cultivated apple
EEE60649  594 SEYAVssn-----------------gvgRGTLLASLAEAAFLTGLEKNSDVVQMASYAPLFMNDndlswN-----P---- 647 Japanese rice
BAC10349  461 SEYAVtgk-----------------dagKGTLVEALAEAAFLVGLERNSDVVEMASCAPLFVND-----NdrrwsP---- 514 Japanese rice
AAL18931  459 SEYAVtgn-----------------dagKGSLLAALGEAGFLIGVEKNSEAIEMASYAPLFVND-----NdrrwnP---- 512 tomato
YP_824261 446 GEWATReg------------------gpTPNFGAALGDAAFLTGLERNSDVVIMAAYAPLFVNV-----N-----Pggmq 497 Solibacter usitatu...
NP_696309 558 GEYSANgyfagq----------pqteqgANTWKSALGEAAFLTGCERNSDVVRMTSYAPLLAHIpakgwA-----Q---- 618 Bifidobacterium lo...
1PZ3_A    359 ---IMTEKnG-PAWKQTIYYPFMHASVYGRGVALHPVI-SSPKYDSKDFtDVPYLESIAV-YNEEKEEVTIFAVNRDMEd 432 Geobacillus stearo...
AAO92261  518 ---DAIVFnSsHLYGTPSYWVQRFFAESSGATLLTSTL-KGNSTS---L-VASAISW----KNNGKDYIRIKAVNFGANs 585 thale cress
NP_197984 517 ---DAIVFnSsHLYGTPSYWVQHFFTESSGATLLNSTL-KGKTSSVEAS-AISF-------QTNGKDYIQIKAVNFG-Eq 583 thale cress
BAD30073  510 ---DAIVLnSaKAYGTPSYWMQQFFIESNGATLLNSTL-QASSTNSLH---ASAIIWKNT--DDATYYLRLKFVNIGSV- 579 carrot
AAP97437  514 ---DAIVFdSsQLYGTPSYWVQCLFNESSGATLYNSTL-QMNSSTSLL---ASAISWQNS-ENENT-YLRIKVVNLG-Ty 583 cultivated apple
EEE60649  648 ---AAVVFnSwKQYGSPSYWMQTIFRESSGAVLHPVTI-NS-MYSNS-L-AASAITWKAS----NSSFLRVKIVNIGSN- 715 Japanese rice
BAC10349  515 ---DAIVFnSwQNYGCPNYWMLHFFKDSCGATFHPSNI-QISSYNQ--L-VASAITWQNS-KDKST-YLKIKLVNFG-Nq 584 Japanese rice
AAL18931  513 ---DAIVFtSsQMYGTPSYWMQHFFKESNGATLLSSSL-QAN--PSNSL-IASAITWRNS-LDNN-DYLRIKVVNFGTT- 582 tomato
YP_824261 498 wtsDLIGYdAlSSYGSPSYYAQVMFASCLGDHTVSSSL-AG---------AGERFFYSVT-ASQNK--LCVKLVNASSTe 564 Solibacter usitatu...
NP_696309 619 ---NLIEFnPaHVNPTVNYEVERLFSTHLGDTTYAVSIeQTASRPAKH------LYVSATgHDRDDACRYIKIVNISDSp 689 Bifidobacterium lo...
1PZ3_A    433 -ALLLECD--VRSFe-----D--Y-----R-----V--IEHIVLEHDNVKQTNS-----AQsSPVVPHR--NGDAQ---L 480 Geobacillus stearo...
AAO92261  586 -E-NMQVL--VTGL------D--PnvmrvS-----G--SKKTVLTSTNVMDENSf----SQpEKVVPHE--SLLE----L 636 thale cress
NP_197984 584 -SVNLKVA--VTGL------M--A-----Kf---yG--SKKKVLTSASVMDENSf----SNpNMIVPQE--SLLEM---T 633 thale cress
BAD30073  580 -PVSMKIS--IDGV------KinT-----K-----S--ALSTVLTSDNVMDENSf----DKpAKVTPVR--APLTAnveL 632 carrot
AAP97437  584 -TVNLKVF--VDGLepn-svS--L-----S-----G--STKTVLTSNNQMDENSf----NEpKKVIPKR--SLLES---A 636 cultivated apple
EEE60649  716 -PVNLIVS--TTGLea--lvN--M-----R-----K--STITILTSKNLSDENSf----SKpTNVVPVT--RELPN---A 767 Japanese rice
BAC10349  585 -AVNLSIS--VSGLde--giK--S-----S-----G--SKKTVLTSSGPLDENSf----QQpQKVAPVS--SPVDN---A 636 Japanese rice
AAL18931  583 -AVITKIS--LTGLgqnsleT--L-----F-----G--AVMTELTSNNVMDENSf----REpNKVIPVK--TQVEK---V 636 tomato
YP_824261 565 --QTLSLT--MQGL------G--A-----S-----ShtARVQTLKAITTWATNTi----AQpERIVPVK--ST-AS---I 612 Solibacter usitatu...
NP_696309 690 vDVTLEIArgLAGL------G--A-----SpsrpvR--LEVTTL-SANPTAKTTigyrgEAsGAIVPERraYTLPS---P 750 Bifidobacterium lo...
1PZ3_A    481 SdRKVSATLPKLS 493 Geobacillus stearothermophilus
AAO92261  637 AeEDMTVVLPPHS 649 thale cress
NP_197984 634 EqEDLMFVLPPHS 646 thale cress
BAD30073  633 DgTEMTFTLAQHS 645 carrot
AAP97437  637 g-EEMEVVISPRS 648 cultivated apple
EEE60649  768 GeEMFAF-LGPYS 779 Japanese rice
BAC10349  637 N-EQMGVLVDPYS 648 Japanese rice
AAL18931  637 SdN-MDVVLAPRS 648 tomato
YP_824261 613 KdEHIQHVMPGYS 625 Solibacter usitatus Ellin6076
NP_696309 751 S-SLLAMKIKPYS 762 Bifidobacterium longum NCC2705
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