Conserved Protein Domain Family
S1-like

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pfam14444: S1-like 
S1-like
S1-like RNA binding domain found in DBC1
Statistics
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PSSM-Id: 339229
View PSSM: pfam14444
Aligned: 17 rows
Threshold Bit Score: 84.6491
Threshold Setting Gi: 780066475
Created: 11-Apr-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 122105129    50 RVFsgTGHVTKVQNDFGFIDEEVFFHKN-V-CKGLFPKVGDRVLVEAAYNQNMPFKWNATR 108
gi 780066475   236 krF--KGFVTHVYPGYGFIDGTIFFSRRaC-ELNYVPKRDDQVEGNAIESDQSKGKWRAVl 293
gi 268535194   103 RTF--VGVVTKMLDTYGFVDDDVFFQHS-V-IRGSHPRVGDKVMVEANYNPSMPFKWNAYR 159
gi 1009338746   81 RTF--SGVVTKMHDNYGFIDDDVFFQVS-N-VRGALPRTGDRVMVEASYNPTMPFKWNAYR 137
gi 528491274     8 RVF--TGVVTQMQEHHGIVDQDVHFPMS-V-VVGRMPVVGEKVLVKAIQDSQKPISWTAQK 64
gi 597773158     4 RVF--TGVVTQLQDHHGMVDQEVRFPIS-V-VVGRVPLVGEKVLVKAVQDSLQPLSWTAQR 60
gi 972948962    44 RVF--TGVVTQLQDYYGMVDEEVQFQMS-V-VKGRLPQVGEKVLVTAVLDPAVSQSWTAQK 100
gi 556966607    66 RVI--TGVVTKLHDYFGVVDEDVIFQIS-A-VNGRIPQVGEKVLVTAIYDPKVSMNWNAVK 122
gi 55726397     55 RVF--TGIVTSLHDCFGVVDEEVFFQLS-V-VKGRLPQLGEKVLVKAAYNPGQAVPWNAVK 111
gi 1026664820   49 RVF--TGTVTKVQDNFGFVDNDVFFQSS-CcVKGSSPQVGDRVLVEAVYNSNMPFKWNATR 106
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