Conserved Protein Domain Family
zf-C4pol

?
pfam14260: zf-C4pol 
C4-type zinc-finger of DNA polymerase delta
In fission yeast this zinc-finger domain appears is the region of Pol3 that binds directly to the B-subunit, Cdc1. Pol delta is a hetero-tetrameric enzyme comprising four evolutionarily well-conserved proteins: the catalytic subunit Pol3 and three smaller subunits Cdc1, Cdc27 and Cdm1.
Statistics
?
PSSM-Id: 339136
View PSSM: pfam14260
Aligned: 260 rows
Threshold Bit Score: 31.9186
Threshold Setting Gi: 255086906
Created: 4-Apr-2017
Updated: 23-May-2017
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 50403732   1012 CIGCRtvlshqG----AVCEFCQ-PRESElYQKEVSHLNALEERFSRLWTQCQRC----QGSlhedVICTSRDCPIFYMR 1082
gi 307203009    13 CVACG------EqtnkEVCAECVsQPSRT-ILVLLEKICQLERTHQQIASICHSCig-rSGD----IECASLDCPVLYQM 80
gi 1134622796 2013 CITCG------EqtnkEVCPDCFsQPSRT-ILILLQKIRQIERNQQQITAICHSCtg-rIGD----VECLSLDCPILYRm 2080
gi 1069670940 1872 CITCG------EqtnkEICPDCLlQPSRT-VLILLEKIKQLEKNHQQITAICHSCig-rLGD----IECVSLDCPVLYRm 1939
gi 597794646  2960 CPVCD------EltqlGVCERCRaEPQRV-VVTLQQNLRQWESQQDQLLKICRACsgsvERQ----VPCVSLDCPVLYKV 3028
gi 410928855  2856 CPACD------EltqlGVCSHCRaEPQRV-AVTLHQEMRQWESQQELILQICRNCsgsaERL----VPCVSLDCPVLYKl 2924
gi 115530809   429 CPVCD------EltqhGICSKCRsQPQHV-VVILNQEIRELEYKQDQLAKLCRNCtgcsNQQ----IQCVSLNCPVLFKl 497
gi 565322110  2965 CPVCD------EltqhGICNKCRsQPQHV-IVMLNQEIRELERKHEQITKVCKNCtscfDRQ----IPCISLNCPVFFKv 3033
gi 9957534    2964 CPVCD------DltqhGICSKCRsQPQHV-AVILNQEIRELERQQEQLVKICKNCtgcfDRH----IPCVSLNCPVLFKl 3032
gi 260823502   723 CPVCN------GpaqqGVCTHCQgDPQLV-AVTLNNQIRAWERTYQHLQQVCRSCtg-sPGQ----PSCISLDCPVLYKy 790
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap