2DHA,1X4F


Conserved Protein Domain Family
RRM_6

?
pfam14259: RRM_6 (this model, PSSM-Id:290958 is obsolete)
Click on image for an interactive view with Cn3D
RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
Statistics
?
PSSM-Id: 290958
View PSSM: pfam14259
Aligned: 74 rows
Threshold Bit Score: 34.1217
Threshold Setting Gi: 74583154
Created: 23-Jul-2015
Updated: 5-Aug-2015
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2DHA_A        26 VRMRGLPFTATAEE-VVAFFGQHC-PITGGKEGilfvt--ypdgRPTGD---AFVLFACEEYAQN---ALRKHKDLL-GK 94   human
P87143        73 IILQGLTPEILEEH-IELALYATG-AKVSTVTLirek----etqKSRCF---AFAKFVSLQDSKDw-mEANFPTLVI-DG 141  Schizosaccharo...
Q6R607       389 LFISNLTEAITDED-IKEEFTKAGfELDGYYRK------------NPSV---AIVSLRDIETAVQ---ALILVHSQQlKE 449  Trypanosoma cruzi
Q4S097         4 LYIGNLGDSVTAED-LGKTFDEHKiPYTGQFLM------------KTGY---AFVDCPDDQWAMKa-iETFSGKVEL-KG 65   spotted green ...
Q4UCN0       106 IYIGNIPP-VGDIEiLMDIINQALiSVNGTSMPgnpc----lkgWISSDghyAFIELRTMEEASN---CMQLTGLNI-MG 176  Theileria annu...
XP_001642554  32 VYIGNINPRSKAED-ICNVV-RGG-TLQQIKFF-----------KEKGI---CFVTFIEAASAAQfyaNSFIDPIIL-HN 93   Vanderwaltozym...
XP_001610631  27 IYIGNIPPQADVNN-LLEFLNDALtAVNGTSIPgnpc----qkgWISADshyAFVEMRTMEEASN---CIQLSGINY-MN 97   Babesia bovis ...
XP_002496499  94 AIINNIPWDITPEG-VQAWVE-DGlHKEDAVEEvdlprsikdptRLKGI---AFVTLKGREDLVQ---TLTFNGTPL-ND 164  Zygosaccharomy...
CDP92191     132 IVMKMLPTDSQRDA-LMALTARQGfRVKDIRIIhk--------gPDRCF---GFVEFGDVNSAQAw-mEYNKGTLLLdDG 198  Brugia malayi
XP_002640080 243 LAIMNMPNDVDNTK-ITLSLGKCGyLPQDVRTMtkfd---knskQIRTF---AFVEFSNLETAEQw-mADYQGWLTLdDG 314  Caenorhabditis...
2DHA_A        95 RYIE 98   human
P87143       142 IDVS 145  Schizosaccharomyces pombe 972h-
Q6R607       450 RFLR 453  Trypanosoma cruzi
Q4S097        66 KRIE 69   spotted green pufferfish
Q4UCN0       177 HNIK 180  Theileria annulata
XP_001642554  94 NTLR 97   Vanderwaltozyma polyspora DSM 70294
XP_001610631  98 YSLR 101  Babesia bovis T2Bo
XP_002496499 165 RTVY 168  Zygosaccharomyces rouxii CBS 732
CDP92191     199 RPVK 202  Brugia malayi
XP_002640080 315 RTLA 318  Caenorhabditis briggsae
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap