Conserved Protein Domain Family
DDE_Tnp_1_7

?
pfam13843: DDE_Tnp_1_7 
Transposase IS4
Statistics
?
PSSM-Id: 316368
View PSSM: pfam13843
Aligned: 27 rows
Threshold Bit Score: 234.495
Threshold Setting Gi: 124448387
Created: 28-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q8N328         141 TPTEILELFLDDEVIELIVKYSNLYACSkg---------vHLGLTSSEFKCFLGIIFLSGYVS--VPrRRMFWEQRT--D 207  human
2_pfamImport     1 DPVTLFQQLFPDKILDRLLHSTNAQLKG------------GAPLARSELMAFFGATLLSTTVR--GP-VKHVWEPSEtrF 65  
Q23AY6         346 DSSRLFMYFLGTKILRQLLNKANVKLREiykk-----qndVKEYTIEEIQVYQALKILMGLQQ--NSsNFDFFLLKD--L 416  Tetrahymena ...
17_pfamImport    1 SAVDFFQLFVPDNVLKNMVVQTNMYARKfqerf--gsdgaWVEVTLAEMKAFLGYVISTSVSH--CEsVLSIWSGG---F 73  
9_pfamImport     1 DEISAFEKIFDSDMLEPIVHCTNLIIQEkrltgkysrdrdCSDTSMAEILAVIGILYLIGLQQsgHTnVIDLWASD---G 77  
Q7PR86         110 SPAECLSLFLDADVIAMITEYTNEQIKAeqpny--arerdANPTDEMEIMALLGVLYIAGTVRdgREnIERLFDTKM--G 185  Anopheles ga...
6_pfamImport     1 TPRGLFHKMLPPDIIERMLRATNDQLV-------------GKPLSKDELLGYLGIRMIAANFS--CS-AERLWRTSM--Q 62  
4_pfamImport     1 DPMTFFMHFLPPRILENVVRGSVD-----------------IHLTQEELLAFIGLQIMASNHV--FP-VEELFEPYDdeF 60  
3_pfamImport     1 RPQALFSAFFPPKALDRMVRATNAAAPT-------------LRLEREELLCFFGFHMVAATLA--SP-TEECWRRTHnkY 64  
5_pfamImport     1 SPAGLFRALLPPDAIARMLAATTPHLE--------------SPLSADELMGFFGLMMRCADDA--RP-RDDLWSVESr-F 62  
Q8N328         208 Vh----NVLVSAAMRRDRFETIFSNLHVADNANL-DP-----VDKFSKLRPLISKLNERC--MKFVPNETYFSFDEFM-V 274  human
2_pfamImport    66 Ea----RLKLGDIMPRERFEAVVAALALASSADDvQPpgedeTGPLLEGWQLLDEWNANM--ARVYSPSHLIGIDASQ-A 138 
Q23AY6         417 Qk----IPPYHQLFTNERFQFLLDCERELN-------------KDILNNEQLIQDFVQRA--QNSQTSDQELV----L-I 472  Tetrahymena ...
17_pfamImport   74 Ys----NRSLALVMSQARFEKILKYFHVVAFRSsq------tTHGLYKVQPFLDSLQSGF--DAAFRPSQTQVLHEPL-I 140 
9_pfamImport    78 Tg----MPILRTAMCYKRFLFLLRSLRFDDKSTR-VErr--kTDKLAAIRFIYDKFIENS--KRSYVPGSFMTIDEML-H 147 
Q7PR86         186 Tg----LEAVYLTMTSLRYHFLIRSIRFDDPTAA-PDei--eGDKLAPIRPIYERIVSNC--QKYLRPGRFLMLDEQA-V 255  Anopheles ga...
6_pfamImport    63 QgrfdtRPSMQEVMSLRRFRAISAALRLTDTPL--PAy----DDPIFEVREMVSSWNEHM--QSVFRPSDTVCLDKSTaV 134 
4_pfamImport    61 Dr----RPLFTQVMSLRRFREIAGGLRLNEPNlc-------sNDPCYQIRGMVDAFNEHMgaRAVFTPSCTVCLDKST-V 128 
3_pfamImport    65 Dl----IPPFIDAMSLNRFRDIAAHLKLTDASDN-Pn----ePDPYHGVRELVTDWNERM--ADVYDPSGLAAVFEAP-T 132 
5_pfamImport    63 Yp----NPPVSTIMSLQRFQEIADQLSLSLg----------ePDEVKAVEELIDSWNARM--TQLFSPSSTMCLDKSS-V 125 
Q8N328         275 ----PYF-GRHGCKQFIR-GKPIRFGYKFWCGAT-CLGYICWFQPYQGKNPNTKH-----E---E------Y-G----V- 327  human
2_pfamImport   139 ----ARR-SFADTHIRIQ-HVPCVTSQAHVVACDaVTNVILAMERLEGPAERAAM-----G---KarafddEhD----P- 199 
Q23AY6         473 ----SKK-GKVGEEIIHN-NS----VYTQIFLCElSSAFVFGYFVVKDMSS---------------------------F- 514  Tetrahymena ...
17_pfamImport  141 dedpVFI-ATCTERELRK-RK--KRKFSLWVRQCsSTGFIIQIYVHLKEGGGP-D-----G---L------DaLknkpQl 201 
9_pfamImport   148 ----ACR-CRCDFLQYMS-GKPAKIGIKMQAFVDaVTFYTWNLELYCGQHPEGP------H---K------VsN----S- 201 
Q7PR86         256 ----QFK-GKCEFRQILP-SAPGRAGFRFHLLVDcETSYVSNLEICVPENQNPYN-----Ls-----------Y----A- 308  Anopheles ga...
6_pfamImport   135 ----LNN-KRRPSVVFVG-RKPHPVGNEYHTVCDsQTKIMLAMEFVEGRTRPVQLglpeyE---A------DhG----K- 194 
4_pfamImport   129 t---HHN-DRVPGYTYAG-RKPDPVGNDYHAMYDvHSRVLYHMELVEGAARTAHL-----PlryA------EhG----K- 187 
3_pfamImport   133 ----VHHcDSIPDAVAAR-QCPLPLGHEYHGICDaDTGVTFALEIEEGPHRPLRL-----G---Rrpf-daThP----S- 193 
5_pfamImport   126 ----RHP-SATTPLFRLPsTKPNPTSQEYHNLCDaETRVIMRMELARGQDGSGPA-----A---K------DeLdf-gP- 184 
Q8N328         328 GASLVLQFSEALTE-AHpgqYHFVFNN--FFTSIA-LLDKLSSMGHQATGTVRKDHId---RVPl---eSDVa-L----- 391  human
2_pfamImport   200 TTAKVMRLTRSLRQ-QPv-pRVVALDS--ELCVPH-TLRALATADLHACVGVQQREG----HWP-----PQI--Pgsea- 262 
Q23AY6         515 ANQICINL-ESFTN-QN---HHVYFQNeeFFSNYE-KIQELLNSKIHISSFLNNKFD----QFP-----QSL--Q----- 572  Tetrahymena ...
17_pfamImport  202 HSMVARSLCRNAAG-KN---YIIFTGP--SITSLN-LFEEFEKQGIYCCGLLSSRKSdc-tGLP-----PSMl-T----- 262 
9_pfamImport   202 PAAIVKRLVEPLEK-SN---RNITFDN--SYTSKD-LAADLLKKGLTCLGTLKKNKR----EIP-----PEF--La---- 259 
Q7PR86         309 PTDVAMRLTEPVQG-RQ---KTVILGA--GLTSID-LIEKLYASRTMAMGEVPKSYP----DLP-----KALi-A----- 366  Anopheles ga...
6_pfamImport   195 TTGLLLRLTQSLANlLP---RAVVMDS--AFCVVDaLFQLKRKHGLLACTVAKKKRYwprhHVPg---dNVLeyM----- 261 
4_pfamImport   188 VSALILRMTESSWG-KG---RVVVMDS--EFCTLP-ALVLLKKRGTFAVTVAKKGRSwp-kYVP-----GDV--V----- 247 
3_pfamImport   194 VTALLLRLTTTIQG-AE---RAVVLGP--SLCSLE-AMVDLHRHGIHAVTAAKK-RP----GWPrhvpgEEV--T----- 254 
5_pfamImport   185 LGALALRMTAPFNE-SG---AVVVMDS--TFCNLR-AIVELRRRGLLAVTPIKQQQHq---HWP-----QDL--Dgieaa 247 
Q8N328         392 ----KK----KER---GTFDYRID-------GKgN-IVCRWND--NSVVT-VASSgagIHP---LCL--VSRYSQK---L 441  human
2_pfamImport   263 hafaTH----QPL---GLLSGRQGqv---egTP-L-HLYALRRp-GQTSL-LLST---YGSl-aQTG--APRQCRA---G 319 
Q23AY6         573 ----NE----MLH---NKPLKANN-------SE-T-IFDRQT-----QTQ-LLIK---SDE---NLK--KEVFLTT---S 615  Tetrahymena ...
17_pfamImport  263 ----NPat-pLAR---GQHQIRTK-------GN-M-SLICWYN--KGHFR-FLTN---AYSp-vQKG--VIIKRRS---G 313 
9_pfamImport   260 ---nKS----REL---KSSLFGFQ-------ED-T-MMVSFVPkkNKSVI-LMST---MHD---QPE--ID--------- 302 
Q7PR86         367 ----NKg---RPE---HSTLAAYH-------DP-A-TLVSYVTrrKEVML-LMSS---FVD---FDS--EEQAGEQ---D 415  Anopheles ga...
6_pfamImport   262 ----RD----KPP---AELHGRYGvy---edMP-L-HLHAVNHg-TYTFI-TLAT---YGSirpTGT--PRFYEAP---D 315 
4_pfamImport   248 ----QTdmagRPV---GELHGRSGql----dGErI-CLFSINH--QKYVLtLLST---YGS---SVQ--MGPERKV---R 302 
3_pfamImport   255 ----AH----LAQcvpGKVQSRAGrl---qgVP-L-QLFAANHv-THNLL-VVAS---YGT---PDP--CSSHVMWtaqG 311 
5_pfamImport   248 havaKQ----RPI---GKLCVRHGttktqvpYP-VaHFLVNYG--QYVVQ-LVST---YGS---TKLgrAQRKVRA---G 307 
Q8N328         442 ----KKkiqV---QQPNMIKVYNQFMGGVD---RADENID---K-YRASI---RG-KKWYSSPLLFCFELVLQNAW 499  human
2_pfamImport   320 ----NDl-iTy--HFNAPFEDYVAGRGAAH---AAVGLWE---AeVQAVLe-kWTtASWLGRQLASVLTASFINAF 381 
Q23AY6         616 ----GT---V---KQDKMVEKHKQAIQKITq--KLRMLLT---E-YRFVS---INn-DTTS-IFEELSEIAIQNSY 670  Tetrahymena ther...
17_pfamImport  314 -----E---I---PCPLAVEAFAAHLSYIC---RYDDKYS---K-YFISH---KPnKTWQQ-VFWFAISIAVNNAY 367 
9_pfamImport   303 ----PS---T---GKPQLILDYNETKGGVD---TVDKMCA---A-YSVSR---TT-RLWTQAVFYILLNIGGINSQ 357 
Q7PR86         416 ----EG---E---QHLKLVELYNRTKTTIR---TIQQMCA---K-HNVVR---ST-RRWPVAVFFNLMNLSAINAW 470  Anopheles gambia...
6_pfamImport   316 ----GR---VyryRRIEAIDDYYQARHAVD---DHNYLRQgggQ-FFEEG---WAsKSWGIRQFNFILTSSLVNAY 377 
4_pfamImport   303 ladgTL---Ig-yRRNEPIEDYYQGRHAVD---EHQRLRQ---S-HKHDLeraWGnKSWDVRQLTFIVSVVLVNAL 367 
3_pfamImport   312 ----QR---FvahRTNAMHDYYRGRQACVDqrkLCREMCE---A-LERSW---VP-QDWATRQLVFLLSLTLVNGM 372 
5_pfamImport   308 ----HN---ViafRRNEVMDDFYRACAAVD---QHKELRQ---D-FGHRLeeaWApSKWTLRHLSHILSATMTNAF 369 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap