Conserved Protein Domain Family
PilJ

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pfam13675: PilJ 
Type IV pili methyl-accepting chemotaxis transducer N-term
This domain is found on many type IV pili methyl-accepting chemotaxis transducer proteins where there is also a HAMP, signature towards the C-terminus.
Statistics
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PSSM-Id: 338890
View PSSM: pfam13675
Aligned: 89 rows
Threshold Bit Score: 51.7015
Threshold Setting Gi: 505246853
Created: 11-Apr-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q30XI7        27 YVIAGQRSDSVSINLAGRQRMLAELITgravALIHSAqs-gTDDTASEKLLRRAVSAFETTHNALSGRGQAPLSLEPSgp 105 Desulfovibrio a...
Q47AS6        12 eaLAQIGDSNSAINKAGSLRFQAHRMArlylQTGMGI-----ETDRSRRQLESVSGLYDRRLIELKNYAPTP-------- 78  Dechloromonas a...
Q47EX4        35 gkVADAGQIAQDIASAGRLRMQSQRLAkl-yLQAGIG----LKAGLARQQIDATIGEVDAEFVRLARYGQKS-------- 101 Dechloromonas a...
ADB36762      43 WRLRAVQDELWVIRYAALQRHQSQQIVkqvlQIADPGe--kEKFSENVAALRQVFPVFERYHIQMRRGEADYPRVSIQns 120 Spirosoma lingu...
WP_013034233  37 YTTWQINKLNRNIELSTELQVLTQRFPtltlLMAANN-------KIKQERVSEAISDFDRKLKQIYSSELRIPFIGN--- 106 Nitrosococcus h...
CBV42739      32 WIASGSRGDAATINWAGSLRMNTYQVV------TALQryqhQPDAAQRQHVADMMERFTERLGNP---QPIDSLRISEk- 101 Halomonas elong...
WP_015258545  33 iiaetLRGEATAINRAGALRMQTYIIS------TELLepraETSDARRARVESALDRFDSRYRSEALTRIVPRRQTE--- 103 Thioalkalivibri...
WP_014780443  37 viaQINQGMATAVNQSGTLRMQAYRVG-------VALtddrVPLETRRERARLLAAEYDRWLISERLTAVLPDQATD--- 106 Thiocystis viol...
WP_064650080  38 vLAWVSKSDAQALNSVGSIRMATYRINylltTNTTLPiddhVKLDPTLSINQQLIDDMQARLNVLYAYQNMPGNKDT--- 114 Moraxella catar...
WP_011959944  31 FLAWAAQNDAKAINTAGSIRMATYRMNfllvANQSSAelraADIS-SVQQINQLIDDMNQRQSLLQHYQSQRTNKDT--- 106 Psychrobacter s...
Q30XI7       106 satlgqpsaATLALLRRTDTLWSQHKKLV---------ERALKGD 141 Desulfovibrio alaskensis G20
Q47AS6        79 ---------EIKETYVSLEKAWIGYKDLLfgskvspenARKIVEV 114 Dechloromonas aromatica RCB
Q47EX4       102 ---------TVQRVYARSEALWQEMRVAAtk-----apDIAAVER 132 Dechloromonas aromatica RCB
ADB36762     121 --------dTVQRLYEGIRPEFEAFRKSA---------HQLMRLQ 148 Spirosoma linguale DSM 74
WP_013034233 107 ---------TIKNSQKEIQPIWEQLRKNL---------VEVLNTP 133 Nitrosococcus halophilus
CBV42739     102 --------hPIRTHYQQLERHWQNRLAPR---------IAATIDG 129 Halomonas elongata DSM 2581
WP_015258545 104 ---------PARQAYDEVGRVWHQAIRPG-----------ILAAV 128 Thioalkalivibrio nitratireducens
WP_014780443 107 ---------PVRLAYEGVRVRWVKEMRQAvlgfidageEAAASLA 142 Thiocystis violascens
WP_064650080 115 ---------EIDSQTKTIQHHWLKMLKPA------------LVNN 138 Moraxella catarrhalis
WP_011959944 107 ---------RIYRQIERIHQGWTQTLMPL------------LLAR 130 Psychrobacter sp. PRwf-1
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