Conserved Protein Domain Family
AAA_33

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pfam13671: AAA_33 
AAA domain
This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.
Statistics
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PSSM-Id: 338887
View PSSM: pfam13671
Aligned: 69 rows
Threshold Bit Score: 59.6119
Threshold Setting Gi: 490324045
Created: 11-Apr-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q7V779       347 IVLMHGLSGSGKSFLSEQLYQQLP--------AVRLRSDI---ERQ-RAFgrrplhklLgfekgsmtsvgikplfqgdpy 414  Prochlorococcu...
Q29DM7        89 MIIMRGPSGSGKSTLAESVIRQSGlleqndmlDFVYSTDD---YFNrRVYkfd--------------------------- 138  Drosophila pse...
Q9XZ11       105 MIIMRGPSGSGKSTLAESLLRQAHlldrhqvrDFVLSSDD---YFK-TRRgyvf-----------------------npt 157  fruit fly
WP_014284805   8 LLLVCGKIASGKSTLLAHLVKDHR--------AVLISEDH---WNA-TLFpdel-kslEd-------------------- 54   Pseudovibrio s...
WP_011516478  16 LHMVCGKIASGKSSLTARLAAAPR--------RVLLSEDK---WIA-CLYpdei-htlSd-------------------- 62   Cupriavidus me...
WP_012028855   8 LHLVCGKIAAGKSTLVAELGRRPA--------TVVVAEDE---WLA-QLYpgeq-nslAd-------------------- 54   Bradyrhizobium...
ACQ81973       2 MWLMVGLPGAGKTTRARALEREHA--------ALRLTPDE---WAM-ALLgtl--------------------------q 43   Beutenbergia c...
WP_030273086   7 LFLTVGLPGTGKTTEARRMEVEEK--------ALRLTKDE---WVK-ALYg------lAn-------------------- 48   Micromonospora...
WP_015734813   5 VIMTVGKTHSGKTTFAKELESVLQq-------AIVIDQDNhaeFIN-SHYmkl--rpiEg-------------------- 54   Paenibacillus ...
XP_001958481  97 MIIMRGPPGSGKSTLAESLLRRSClldryaatDFLLSTDD---YFR-TRRgyef-------------------------- 146  Drosophila ana...
Q7V779       415 rPEVTQWlFDQCLPALTQSCLSSGYT-TIVDATFLRERERQRMFVLARQQGCPIAIVACECSDFTAQERIATRMGIGT-- 491  Prochlorococcu...
Q29DM7       139 -rtLLTT-AHNWNKERVQKKASMGWSpIIVDNTNITVWEMLPYVKIAVQYGYLVELLEPQTDWSKSASKLAQKNIHk--- 213  Drosophila pse...
Q9XZ11       158 lLPAAHE-WN---QQRVRDKAASGWSpIIVDNTNTMVWEMQPYVQFAVRHGYVIELLEPNTSWCKSASKLAQKNVHn--- 230  fruit fly
WP_014284805  55 yVKYSAR-VRQAIGPHIVSLLQHGVS-VALDFPANTVRNRKWLKSLFEAANVAHELHYLSVPDEVCKERLWVRNEAGE-- 130  Pseudovibrio s...
WP_011516478  63 yMNRTAR-IRTLLTDHIVSLLTAGTS-VVLDFPFNTVGARTWGASLYRAAGCEHRLHYLEVSDEICKSRLKARNLSGE-- 138  Cupriavidus me...
WP_012028855  55 yVRNSSR-LRAVMGPHVVALLRAGVS-VVLDFPANTRASRSWMRGLFEAAEVPHRLHHLDVPDALCKARLRARNEAGE-- 130  Bradyrhizobium...
ACQ81973      44 igDLRDT-LEGFLLDLAVPALTAGTN-VVVDFGLWGRDERSALRWIAQQCGSPCVVEYRPVGAAEQRERVGARVRSDP-- 119  Beutenbergia c...
WP_030273086  49 pPSASDV-IEGRLIEIALRALELGVN-VVIDFGLWGRDERSALRQAAADLGASVTMRYFQLTPAEQRQRLDRRQAEEP-- 124  Micromonospora...
WP_015734813  55 pNTLKFS-ITNAIVNYA--MEQSNFH-IILSNSNLNKSGRTNVLQNFHDNGFESIIVHFNLPIDLLKERVTQTQRSKAif 130  Paenibacillus ...
XP_001958481 147 nptLLPA-AHDWNKERVSEKAARGWSpIIVDNTNTMIWEMMPYVQIAVQHGYILELLEPQTSWCKSASKLAQKNTHq--- 222  Drosophila ana...
Q7V779       492 Dps-eADLSVRELQKAWIEP-L 511  Prochlorococcus marinus str. MIT 9313
Q29DM7       214 -----VPRENIQRMLERYEK-T 229  Drosophila pseudoobscura
Q9XZ11       231 -----VPRENIQRMLERFER-T 246  fruit fly
WP_014284805 131 Hqf-tVSEEQFEQFTKYFEA-P 150  Pseudovibrio sp. FO-BEG1
WP_011516478 139 Hpf-qTSEEQFDQITSYFVP-P 158  Cupriavidus metallidurans
WP_012028855 131 Haf-yVTDEEFDLFTSYFEA-P 150  Bradyrhizobium sp. ORS 278
ACQ81973     120 Sqe-lLTDAELDAGRAVFEE-P 139  Beutenbergia cavernae DSM 12333
WP_030273086 125 HttwhMSDEELATWAAVMSI-P 145  Micromonospora globosa
WP_015734813 131 Rsa-lSFLEVLERQENTIEIqP 151  Paenibacillus sp. Y412MC10
XP_001958481 223 -----VPRESIQRMLERFER-A 238  Drosophila ananassae
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