Conserved Protein Domain Family
SbcCD_C

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pfam13558: SbcCD_C 
Putative exonuclease SbcCD, C subunit
Possible exonuclease SbcCD, C subunit, on AAA proteins.
Statistics
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PSSM-Id: 338818
View PSSM: pfam13558
Aligned: 101 rows
Threshold Bit Score: 39.5013
Threshold Setting Gi: 544834244
Created: 1-Apr-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123534735 1099 RYELERREG-EALELQVV------D---------TWqadtVRDTKTLSGGESFLVSLALALALSDLVSH---KTSIDSLF 1159
gi 81846042   905 QESHGRQSG-LALDVYDTy-----T---------GQ----TRDVKTLSGGEKFNASLCLALGMSDVIQSfqgNVMIQTMF 965
gi 18202107   845 EYFYKFTGN-YFFELERAt----kGrdkd-ivvvESstsqRRPVSSLSGGETFLASLSFAFAVSDLLSG---SANLESLF 915
gi 122077873 1210 DDVTSTTAR-RSYSYRVVm----kR---------GNs--eMDMRGRCSAGQKVLASVLIRLALSEAFCC-----DCGILA 1268
gi 654954398 1014 SQRLRYLTK-QRYSLEVDs----gGgfv---irdDAnggvRRPVSTLSGGETFLTSLALALALSAQIQLr-gQYPLQFFF 1084
gi 502275912  982 rlsslTRQR-YSLEVDSQggflirD---------DAnggvKRPVTTLSGGETFLTSLSLALALSAQIQLr-gEYPLQFFF 1050
gi 500056512 1104 ILVRDTAEP-LELNVIDNy----qA---------GE----IRSTKNLSGGESFIVSLALSLGLSRMASR---NVRVDSLF 1162
gi 500600007 1206 NANTQLRKM-SDRYILVRd----eNsplelnvidDYqgglIRSTKNLSGGEGFLISLALALGLSSMASQ---NIRVDSLF 1277
gi 506326428  903 SDRLETRGKqSGLGLDVYda---yT---------GQ----NRDVKTMSGGEKFNASLCLALGMTDVIQSfqgGVSIEMMF 966
gi 502482719  829 QQARDNRTQ-SGLDMDVFda---yT---------GKq----RDVKTLSGGESFLASLSLALGFSDVIQRqagGIQLDTMF 891
                          90       100
                  ....*....|....*....|..
gi 123534735 1160 LDEGFGALDSETLEVALDALDC 1181
gi 81846042   966 IDEGFGSLDEESLTKAIDTLVQ 987
gi 18202107   916 IDEGFGSLDQDMRERVSEILEA 937
gi 122077873 1269 LDEPTTNLDEDNARSLAESLRM 1290
gi 654954398 1085 LDEGFGTLDPELLETVITALER 1106
gi 502275912 1051 LDEGFGTLDAELLDTVISALEK 1072
gi 500056512 1163 LDEGFGTLDEDALETALETLAG 1184
gi 500600007 1278 LDEGFGTLDEDSLDVALNTLTN 1299
gi 506326428  967 IDEGFGSLDEDSLNKAIEALVD 988
gi 502482719  892 IDEGFGSLDTEALELALRVFDQ 913
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