Conserved Protein Domain Family
AAA_25

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pfam13481: AAA_25 
AAA domain
This AAA domain is found in a wide variety of presumed DNA repair proteins.
Statistics
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PSSM-Id: 316042
View PSSM: pfam13481
Aligned: 46 rows
Threshold Bit Score: 77.0357
Threshold Setting Gi: 0
Created: 28-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81397879   152 TVNKLf-NLkani----sqqD-DF-YNG-PIEHKELIFH-NCLPlGEVAMLTGAGGSGKSFSTIHLAVSVAl--GLSafi 220
2_pfamImport    1 QPDPV--CFqda-----ildA-DA-FVSlQLPEKKSYLH-PWINeQSIVFIVGWRGVGKSGFILGALDAVTk--GKPf-- 66
gi 81574598    79 TARAN--LRge-------seG-ISpDDVfKIPEERWLAQ-DLIAaRTLTLVVALQKVGKSAVVCNILGELAkgrGEfle- 146
15_pfamImport   1 TVSEL--PAls-------tlA-DR-LAA-PRTRPRWRIQ-DMWPaGGRINLVGAPKAGKTTMTTNVVRALVd--GGQflg 65
25_pfamImport   1 AERAS--EPld-------vtTlAH-QLE-RPAPARWRIG-GLVAaDGSTLLSAQRKTGKTTLALNAVRSILe--GCPflg 66
27_pfamImport   1 G---Q--QLl---------eA-AK-EQS-SIEYLPLLGEeGFVVrGWSHLLAGYPRVGKTELLLGFVAERTq-------- 55
23_pfamImport   1 TPEEL--MEed-------ldD-SG-LKF-RLRCLSDNMR-GL-RgGDFGIVAAAPDAGKTTLLCSESSFWLsqlDELwp- 65
17_pfamImport   1 RNDILs-ELqni------ekV-NG-VKWkRFPVLNKLLK-GHRk-GELTILTGPTGSGKTTFTSEYSLDLAm-qGV---- 64
9_pfamImport    1 R-QNVfeELsnp------gaT-SG-IASiTMPGLSQLLK-GHRr-GELSVWTGATGSGKTTILSQLSLDYCm-qGV---- 64
3_pfamImport    1 PSSTS--EIspdewppaidlV-EL-SKK-PPTPPRHIID-GWLPeGYATLLSAHGGTGKSTIALHQAVCIAl--GHDff- 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81397879   221 gynrPFKPt-KAGKVVVLGGEDFRddYKRRVRSVL--TAMecntqs-------mknrlvENL-HITSL--VgDDIRIIAE 287
2_pfamImport   67 ---gPWTPg-EPVNCLYLDGEMATvdVQKRLREMG--TAgr-----------------kSRL-LVYSDay-aYSLRLP-- 119
gi 81574598   147 --rfSLAP--PCPKVIIVGTDQPLadWREVMVPNG--LMIrt---------------dlDNY-RVCD-----PVVRLYTR 199
15_pfamImport  66 kyttEAVPdcEGPAVVVFDFEMTEdmLLDWYEDAG--ITNth----------------kVET-VLLN-----------GL 115
25_pfamImport  67 --rfDVAP--VSGAVAFLNFEVSRdtFNLWASEVG--VDA-------------------SRL-LPVHLrgR--LNPLVH- 117
27_pfamImport  56 ----------aGDKILYLS-EEPQsiWAVRAARIR--DKVs-----------------wDNL-TLGLAlgV--------- 95
23_pfamImport  66 ---------gQNRTGVWLNNEGPGgrIRKRFYQSL--LNAtipemaalveqgrledrplFTE-AITKAmgMgMDRMLFYD 133
17_pfamImport  65 -------------STLWGSFEIRNtrLAATLLRQF--VGYpl----------------dDKLqEFDHWatEfERLPLYFM 113
9_pfamImport   65 -------------STLWGSFEINNvrLAKTMLRQFsgRNLe-----------------sSLE-DFNYYadKfAELPLRFM 113
3_pfamImport   72 --glPV----ERRKVKYLSCEDRGdvLHWRLARTC--TYLgvsi-----------adldGWL-GLLDL--VgHDTILFQS 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81397879   288 DRGSAK-LTGFVDNIAREVEELGDVRLVILDPMSAFYGA---QENDNHS----A--TMFVNAVNRicK-ATG-AA-VLMV 354
2_pfamImport  120 --KANL-LDEKWRDGFKKSLLDLDVKIVVIDNLASVTGGi--DENSKEA----W--DPIGAWLLQl-R-FAG-IT-TILI 184
gi 81574598   200 EHGLHL-DEAGIEKITADCEQ-NPWAVLVLDAFLSLIGPlglDSDSDAA----V--QPLQNLLESi--aPFN-IT-TVLL 267
15_pfamImport 116 GSGFDF-TNPAV--RAELVNRYGGAHTYILDPVGPLLASlglDENSNSD----Vq--RLLTAWDEfvR-ELGgQE-SMVT 184
25_pfamImport 118 --------PEEREQLARSLRERE-TEVVVVDTFTRAFRG---ASENDAA----Ev-GRFLTDLDVfvRgEVG-ATdLILT 179
27_pfamImport  96 --------DP--ADLLASVKA-SDADVVIIDSIRNLLQPr--DETDNSE----L--ARLVNPWIVacR-EAG-KT-LILV 153
23_pfamImport 134 IHDHTS---AD---VENILKQ-ANAGFVIFDMLDHVKFN---GVTANGGdrtdEvlESMYKQGRNwcV-RYD-CI-GFAT 200
17_pfamImport 114 TFHGQQpLKPVLEAIE-HAQYVHDISHVIIDNLQFMMGI---SSYRGDKf--wEq-DSIIAAFRGfaT-KHN-VH-VTLV 183
9_pfamImport  114 KFHGSTsIDQVIDA-MDYAVYVHDVRHIIIDNLQFMLSG---QNTRAGEvw-eIq-NKAIEKFRRfaT-QKN-VH-VSLV 184
3_pfamImport  130 ANGDEThITAAYRHLAARIRR-EGYQVVYVDGISDTYNG---NENARAE----V--KAFVNCLLAt-I-PLD-GA-VVLI 195

                  ....*...
gi 81397879   355 HHSSKGSA 362
2_pfamImport  185 HHEGKTGQ 192
gi 81574598   268 HHSSKSRA 275
15_pfamImport 185 MHAGHNGE 192
25_pfamImport 180 AHTGWNGE 187
27_pfamImport 154 HHTRKGGG 161
23_pfamImport 201 SQLSVDGV 208
17_pfamImport 184 MHPRKERQ 191
9_pfamImport  185 VHPRKEAD 192
3_pfamImport  196 GHVAKLTA 203
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