Conserved Protein Domain Family
PQQ_2

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pfam13360: PQQ_2 
PQQ-like domain
This domain contains several repeats of the PQQ repeat.
Statistics
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PSSM-Id: 338699
View PSSM: pfam13360
Aligned: 53 rows
Threshold Bit Score: 75.9169
Threshold Setting Gi: 500719585
Created: 11-Apr-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5YS39         73 EDAVV--GFAp--dGARQWTLrkdg---------arpDTDRvrPVlFQPVLLVGw--------eGTPGLVAYSTETGGQL 131  Nocardia farc...
Q2GKV4         94 DQGRLt-ALNsgdtSKVLWYValag---------grrSVYSssLIhSRGVILCA----------IDNVLYGLDPSTGQVK 153  Anaplasma pha...
Q4FL12        120 NKGEIt-LYDen--qKTLWKNnfynk------sekkiRPRLnfAL-KNNILIVTd---------DVAKYYAINIDTGELL 180  Candidatus Pe...
WP_012447214  853 VMGDIlkALDqe-sGETIWEFqadl--------qteeTHPLlrPVlVDDYLFTAiqdtyydqqgLVPQLYKLDKETGEIE 923  Natranaerobiu...
WP_011979998   47 DMGHIe-VYDta-nRKKIKEVsipdvkdf-mgdimpaRVMStdVTgEKYLLLSDsg------kgGYSNLYLYDKTLKQLL 117  Sulfurovum sp...
WP_012888145  414 DNDSIs-AFDpr-tGEELWISgl-------------sDGEPewTFpSGSTLVVRd---------TRDRLHGLDAATGKQR 469  Streptosporan...
WP_013283272  109 PDGVIayRLDd---GAQAWGVpapq---------atsLCAAaqTLaEGRGVVALgs------adSCDTIVGFDAAAGTQT 170  Micromonospor...
WP_012910572  109 SKEVVr-ALSrt-dGSELWRVewkgaiivpffamsngSWIRatPAfDGTTLYVAg---------MRDLLVALEASSGKEL 177  Pirellula sta...
WP_013111836  114 KTEHVy-RLDrt-tGKKIWEQswegaisvpffakangDWIRgtPAlAGSRLYVPg---------IRDLLVCLNAENGEIL 182  Planctomyces ...
WP_012913027   95 KDEYLi-CLAkd-gGNVLWKSklgpawn---ngspnwQSSRstPTvDGDLVYALt---------AYGRLICSKTSDGSEV 160  Pirellula sta...
Q5YS39        132 WSTAA--EEWTQGDt-----------------------aDG--TVTFADaRTGTQAWSvSLASfg------cpPTEDALV 178  Nocardia farc...
Q2GKV4        154 WSSTL--RNFISGNlvllnegq----------svafmtiDG--YLCVFDvETGGLLWHrEESSvqv-----rvKSDLSVA 214  Anaplasma pha...
Q4FL12        181 WTKT-------NIVpfnsnikik-------ndvfyvvdyKN--ILRSISiKDGSEIWN-LKTEeslt--ksntQISIVLD 241  Candidatus Pe...
WP_012447214  924 LSIEL--DNFAEHIyndgqr-------------iylvdeDE--QILGYD-HDLNKQWHkDLENl---------DRLSPLH 976  Natranaerobiu...
WP_011979998  118 SADDK--EAIIKARfvddsh-------------illgylSN--EVALLDiNSRKERYRvQLSE----------SKFSDFA 170  Sulfurovum sp...
WP_012888145  470 WTFTP--EGRplflegeaa------------rgvvlatpEYfdAYAAISiTDGELSWSrQGRLhaq-------------- 521  Streptosporan...
WP_013283272  171 WRATFpvERRTGRSeivapdlsv-------tagqvvvrsGE--NVLGYSlADGKRLWQtDADRll-------pGRDCRLT 234  Micromonospor...
WP_012910572  178 WRLDF--VKELKSPvpsfgfvsspl----ivgehlyvqaGS--GFCKVEkGTGKLVWRtLVDDggmmgsafssPVLASIA 249  Pirellula sta...
WP_013111836  183 WKLDF--VSKFKAAlptfgfvaspl----vtekmvfvqaGG--AVCALDpEKGDLLWRsFDDGggmngsafssPFLAEID 254  Planctomyces ...
WP_012913027  161 WRKDL--KEDFGGSkgdswgysesvlvdgdlvvctpgsdKN--TMVALNkLTGETVWSaVREGdrga--ghasIVISNIG 234  Pirellula sta...
Q5YS39        179 pvwiRDVVLIRCHtatgpDGKGadqwvAALDpRDGAVRWQRQLtGGDHVTVE------------SRNTLAvklsSGetdV 246  Nocardia farc...
Q2GKV4        215 yssgKHYVIVVLP-----DGRV-----LCLDsYSGDKMWESELrRRSMgsig---------sieITPVVAg-------sE 268  Anaplasma pha...
Q4FL12        242 ----DKNIYFNNS-----IGDI-----TAVDiKSGQLVWQL-----PTQNNNisqna--fqlsnSELVIN----EN---T 293  Candidatus Pe...
WP_012447214  977 ikpdGDKVAVMT------RNGV-----VMLDgKTGEVsqd---------------------dtnGGTKQNinhvSEyegD 1024 Natranaerobiu...
WP_011979998  171 lnedKSQAVFACE-----SGVL-----NVVDvKSGKVikq----------------------lqGQNVDNvykvDYkqkT 218  Sulfurovum sp...
WP_012888145  522 -ctdGKRFYVLGP-----GLNL-----AALDpLTGREIWNRPS-RMPPYSSrtg-------qpsYELVLA----EDm--L 576  Streptosporan...
WP_013283272  235 daqaAGDQAVVTAlcdgdRGAL-----LGLDpATGKPRWQQKLpAAQQSAGVlsvdplvslpglSTETFVardaAGkarA 309  Micromonospor...
WP_012910572  250 ----GQEQMLVQT-----RTKL-----CGVElTAGKELWSLEI-PA-FRGMNi-----------LTPTVI-----Gn--S 295  Pirellula sta...
WP_013111836  255 ----GQTQLLIQS-----REKL-----AGLVpQTGEVLWQIPI-PA-FRGMNi-----------TTPVVW-----Ng--C 300  Planctomyces ...
WP_012913027  235 ----GTKVYVQTT-----ASGA-----LGVRaSDGKLLWSYEI-DK-TTAVi------------PTPIVK-----Gd--Y 279  Pirellula sta...
Q5YS39        247 LDITTGES-----LARrPAAPGS--------------------------RYRlPRPDGVSLVMDSTTla----------- 284  Nocardia farc...
Q2GKV4        269 VFVVDDSGa----LSSiDLETGKitwsed------------------lgvlslSKEDEETLFVVTDT------------- 313  Anaplasma pha...
Q4FL12        294 IFFSNNKNe---fYSI-DSATGLinwkt-----------------eissDLK-PVVIGKLIITIS-Ek------------ 338  Candidatus Pe...
WP_012447214 1025 LYASTKEE-----IITlDWSESNkskqile------------nplkdeeIMGfSILDDELLVISR--------------- 1072 Natranaerobiu...
WP_011979998  219 VSAAGQDRr----GALyDVTTGTgtyiqg---------------dfliyATAlSPSAEKVAFTMDEQ------------- 266  Sulfurovum sp...
WP_012888145  577 VCRCSGPEr----VAVfDVATGRrrwpaksitgliwarsdrtfiyvdseIKAcDLLTGETLWTGEAAdnslrfrggtedl 652  Streptosporan...
WP_013283272  310 TFGNPVDG-----TRFsDLPVNRsntv-------------------sgpGIRpYLADADTLYLPTEAtnvgg-------- 357  Micromonospor...
WP_012910572  296 IFTSS-YGgksllIEV-ARDGEkwttter-------------wntkqqgYMSsPVVIDGQIYLHLr-------------- 346  Pirellula sta...
WP_013111836  301 VFTSS-YGggsflMKP-EQTSPGkwtvnev------------wknkvqgYMStPIVSGDHAYLHLr-------------- 352  Planctomyces ...
WP_012913027  280 VFFSAGYKrggalLKQ-VAGENGevkveevy----------plntalanKHGgIVLVGDYLFGDSdd------------- 335  Pirellula sta...
Q5YS39        285 -----eNTAMRLEEADGRVRWTA 302  Nocardia farcinica
Q2GKV4        314 ------GELLAYDVDSKVRLWKL 330  Anaplasma phagocytophilum str. HZ
Q4FL12        339 ------GYLYIIDKKSGNIIRIN 355  Candidatus Pelagibacter ubique HTCC1062
WP_012447214 1073 ------NHILLYDLEEQEFNWKK 1089 Natranaerobius thermophilus
WP_011979998  267 ------NNISIYRTSDKA---KI 280  Sulfurovum sp. NBC37-1
WP_012888145  653 ligatiEGLHGWDVKSGRRSWNF 675  Streptosporangium roseum
WP_013283272  358 -kmrqaNQVVAIDLATGNRRWVS 379  Micromonospora aurantiaca
WP_012910572  347 -----nQRFTCLSVADGAEAFTT 364  Pirellula staleyi
WP_013111836  353 -----nQRFACIDLKTGKEAWIT 370  Planctomyces limnophilus
WP_012913027  336 -----aGIPFCADLMTGEIKWKE 353  Pirellula staleyi
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