Conserved Protein Domain Family
Helicase_C_2

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pfam13307: Helicase_C_2 
Helicase C-terminal domain
This domain is found at the C-terminus of DEAD-box helicases.
Statistics
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PSSM-Id: 338674
View PSSM: pfam13307
Aligned: 100 rows
Threshold Bit Score: 123.827
Threshold Setting Gi: 74979443
Created: 28-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
A7UXD4        789 LLNLCSVVPDGVVAFFPSYGYLEEVIGVWKTheqamgpktiweR--LESKKALFIDS----KTESSEQTLQKYSDvihse 862  Neurospora cr...
Q880W4        590 MATQFAARPGNYLAFFSSFDYLLQVAELMAR------------T--HPH--ITLWQQargmAEGERHAFLERFTL----- 648  Pseudomonas s...
Q2SNK0        596 IHQTIASRPGNYWTFTPAFSYMEQLTERFAA------------L--YPEVEFVQQTRq--aSQEDQQRFLARFRK----- 654  Hahella cheju...
WP_015924209  594 IWSSISKRTGNYVVFFPSYKYMNEVYTRFTE------------Q--YPETN-TIIQEts-mTEEERESFLNRFQS----- 652  Clostridium c...
WP_012198254  664 IEGFVNAKVGNYFVFFPSYQMLQQIAQLSED------------R--IPNLLLQKTSM----GELEKEEFLAAFEEn---- 721  Clostridium p...
SCI27279      632 lelCLEKKAGNYMIFFPSYEMLTSVYGMAEQ------------S--NLALVSELIVQepsmEERSREAFLEKFREq---- 693  uncultured Eu...
WP_010074793  588 IILTAKSKIGNYMVFFPSYKYMEMVYESFLE------------RetGLTSKIQGSSM----TEEEKEEFLGAFKNd---- 647  Clostridium c...
WP_015737823  590 LSALVQEKPANTLIFLPSYPYMQDIHEAFAR------------M--NPEARTLLQGHg--mSEEEREAFLNAFQAd---- 649  Paenibacillus
CDE21776      590 lyAAITQRNGNYILFAPSYAYMKQLYEHFIK------------S--YP--DIDVFYQqqdmTEEEKQTFLAQFQI----- 648  Eubacterium d...
CBK74961      612 IQTIVNAKQGNYMVFGPSYKFLEDIVTEYQA------------F--GDDVDILIQQQn--mTEQEREDFLLEFET----- 670  Butyrivibrio ...
A7UXD4        863 vrplspagsRVKGAML-LSVIG--GKMSEGINFSDRLGRCVVVVGMPYPNPHSPEWLARREYLEANFIkrytasqqtsta 939  Neurospora cr...
Q880W4        649 ----------SSQGIG-FAVLG--GAFGEGIDLPGARLIGAFIATLGLPQL-NPVNEQFKQRMAALFG------------ 702  Pseudomonas s...
Q2SNK0        655 ----------ARNLLG-FTVIG--GVYGESIDMVGDSLVGCIILGPGLPQI-SPVNEQVSAYFERQGM------------ 708  Hahella cheju...
WP_015924209  653 ---------GTEKSLVsFGVLG--GIFSEGIDLKGDRLIGAIIVGVGLPQV-SPEQNIIMDYFKNKNR------------ 708  Clostridium c...
WP_012198254  722 ---------PTNTKVG-YCVMG--GIFSEGIDLKKDRLIGAVIVGTGLPQVGNER-ELFRGYYDDRNG------------ 776  Clostridium p...
SCI27279      694 ---------SGKPLIG-FCVLG--SIFSEGIDLTGNSLIGVLIVGTGLPQICNER-EVIRAYFDRQQK------------ 748  uncultured Eu...
WP_010074793  648 ---------PEESYIG-FCVLG--GHFSEGIDLTYDRLIGVIIVGVGMPQIGIDR-DIIKDYFNEKEG------------ 702  Clostridium c...
WP_015737823  650 ---------AEDPLIG-FAVMG--GIFSEGIDLKGERLSSVVVIGVGLPQL-SFENDIIKDYFDRTGK------------ 704  Paenibacillus
CDE21776      649 ---------SKHLRLY-FCVCG--GMFSEGIDLKGDALIGVILVGVGLPQI-NPYSDLIRQHFDEENQ------------ 703  Eubacterium d...
CBK74961      671 ----------KRDKSM-VAFCTlgGIFSEGIDLVGGKLIGSIILGAGLPQVGNQR-KLMSDFFDEQGK------------ 726  Butyrivibrio ...
A7UXD4        940 taplpapvipppsntthystnpsssrnkdkhkpanvrklaaRDSHQFYENATLRAVNQSIGRAIRHQNDYAAIVLIDNRF 1019 Neurospora cr...
Q880W4        703 -----------------------------------------AGYDYTYLYPGVQKVVQAAGRVIRSQSDSGVVMLIDDRF 741  Pseudomonas s...
Q2SNK0        709 -----------------------------------------DGFAYAYQLPGWQKVVQAAGRVIRTELDKGVVILVDDRF 747  Hahella cheju...
WP_015924209  709 -----------------------------------------MGFENAYMYPGMNKVLQAAGRVIRSEHDVGTVILLDERF 747  Clostridium c...
WP_012198254  777 -----------------------------------------SGFDHAYLYPGINKVLQSAGRVIRTVEDKGAILLLDERF 815  Clostridium p...
SCI27279      749 -----------------------------------------KGYDYAYRYPGMNKVLQAAGRVIRTAEDVGTILLMDERF 787  uncultured Eu...
WP_010074793  703 -----------------------------------------TGFDYAYTYPGMIKVLQAVGRCIRTEEDKGVIVLIDTRY 741  Clostridium c...
WP_015737823  705 -----------------------------------------RGYDYAYVYPGMNKVLQAGGRLIRSEQDSGTLTLVDDRF 743  Paenibacillus
CDE21776      704 -----------------------------------------QGYAYAYQYPGMNKILQSAGRLIRSHEDKGILLFIDERY 742  Eubacterium d...
CBK74961      727 -----------------------------------------NGFEYAYLYPGMNKVIQAAGRLIRTKDDVGVIALLDERF 765  Butyrivibrio ...
A7UXD4       1020 EKEHVRAKLPGWIRE 1034 Neurospora crassa OR74A
Q880W4        742 AERKVAQLFPAWWRP 756  Pseudomonas syringae pv. tomato
Q2SNK0        748 TKPPYPALEPQHWRP 762  Hahella chejuensis KCTC 2396
WP_015924209  748 SNGNYRRLFPKHWeh 762  Clostridium cellulolyticum
WP_012198254  816 LNSQYKNLFPREWEQ 830  Clostridium phytofermentans
SCI27279      788 LERDNQSLLPEEWES 802  uncultured Eubacterium sp.
WP_010074793  742 GQRRYTQLFPAEWRN 756  Clostridium cellulovorans
WP_015737823  744 LNRQYGMLLPEEWRH 758  Paenibacillus
CDE21776      743 TSLHYRGALPSHLHP 757  Eubacterium dolichum CAG:375
CBK74961      766 RFGSYRKTFPREWND 780  Butyrivibrio fibrisolvens 16/4
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