Conserved Protein Domain Family
DUF4066

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pfam13278: DUF4066 (this model, PSSM-Id:257621 is obsolete)
Putative amidotransferase
This domain contains similarities to other amidotransferase families such as pfam00117. Some members of the family lack the likely catalytic residues.
Statistics
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PSSM-Id: 257621
View PSSM: pfam13278
Aligned: 51 rows
Threshold Bit Score: 88.8418
Threshold Setting Gi: 167974708
Created: 30-Mar-2013
Updated: 4-Apr-2013
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2BQ44         7 VAFNGCQASGLVSPFDVFNVINtlwrqqrgG--DEDLYQCHLVALSNDp-VRCSNGII----------LqPDFSLNDA-- 71  Neptuniibacter ...
Q92PQ2        18 VVLPESSIMSFASVLDPMRAANr------vA--GHEVFRWRLLSADGQa-VMLTCGVP----------IaVDGSFTLP-- 76  Sinorhizobium m...
YP_004115162   9 IASRGFSPFHFSVPLMVFGKAM--------P--QEDLFRVTVAAEQPGl-IASDNGLS----------IqVEHGLASL-- 65  Pantoea sp. At-9b
YP_001327114  18 IILPESSIMSLASVLDPMRAAN--------RvtGHEVFRWRLLSADGDa-VMLTCGLS----------IpVDARFALP-- 76  Sinorhizobium m...
ZP_16226352   11 LLLDNFSMIAFSNMVEVLRMANy------vT--EDNLYQWNVTGLDGHh-SCASNGLQ----------IqHTCVWSHL-- 69  Acinetobacter b...
YP_001668923  34 VLREHFSMMAFTAAMDSLVTANl------mS--ATPLFQVQVVGEGAQ--VMSDLGIA----------LpVNTQLADLdv 93  Pseudomonas put...
ZP_03781203   66 FLFDDFNSMDVFGPVEVFGKLP-------------EHFHINYWSVSGNi-INSSQGAK----------L-WTEPVDEE-- 118 Blautia hydroge...
ZP_01966390    6 FLFDDFEVMDAFGPVEIFGRVP-------------EHFYVRFISLRGGl-ITGKQEMK----------I-WTEPLNPV-- 58  Ruminococcus ob...
YP_943276    352 LIYDQIEIQDFAGAFEIFSAARn------dD--NSSVFNVFTVAADKAp-ITCNSGVTptggksssfkItADHTLDCH-- 420 Psychromonas in...
ZP_01881675   23 LLAQGFVATELAIAFDSFRIAN--------RlaGRELFRLQIVSVDAAntLTSLGGME----------ItVTPMDSTT-- 82  Roseovarius sp....
Q2BQ44        72 PEADLILLPGIHH--------AD-SRSLISNVKALDkigrwvnsriEQGEAVAANCSGVLLLAEQGVLDNQEATTAWWLA 142 Neptuniibacter ...
Q92PQ2        77 VVGDLLLIIGGFNlh-----rHA-GKRFLATLQECA----------RHFDIVAGVESGCWLLGRSGLINGRKATAHWEEL 140 Sinorhizobium m...
YP_004115162  66 AEADIVIVP-FWQhp----eeQP-SAALSGALIDAW----------QGGAEVVGLCLGAYVLAYSGLLDHRRAATHWEFE 129 Pantoea sp. At-9b
YP_001327114  77 IVGDLLLIIGGFNle-----rYA-GKRFLATLQECA----------RHFDIVAGVESGCWLLGRSGLIKGRKATAHWEEL 140 Sinorhizobium m...
ZP_16226352   70 LNMDIVFICGGFQly-----knM-TVRLKNFLYRLD----------QQKIALGGLCTGAYVLAKANLLNGFRASLHWENT 133 Acinetobacter b...
YP_001668923  94 HGLDCLLVCGGFRvr----leAA--PQLRAKLRQAD----------QYGCQLGGLWNGAYFLAEAGLLNDHDCAFHPDGR 157 Pseudomonas put...
ZP_03781203  119 MENGILLIPGGRGar----rvIHhERETIELLQKLV----------SNADTCLMVADGSGFLAQTGVLYRRNIAEYKMNE 184 Blautia hydroge...
ZP_01966390   59 EIEDIFLIPGGTGvksflhmeGE-NGQQL--LKQAV----------EEASFCMMVQNASALLARTGLLFHRQVADYAYDE 125 Ruminococcus ob...
YP_943276    421 PKIDTLYIIGGPGidalldkeAQ-QPFLTEWISIVS----------EEADYVAGTCSGALLLVLSKQLKNMNVTTHHTRF 489 Psychromonas in...
ZP_01881675   83 NLPDLLIVTGGSem------aRA-LRRFLPRLQRVR----------NAGGLAVVLSDAAQALLTAGAAE--TAAVHWEGR 143 Roseovarius sp....
Q2BQ44       143 DLFRKRYPQVRHIsD-KLLVKSD---------RICTTGSMSANLGVMLQFAE 184 Neptuniibacter caesariensis
Q92PQ2       141 EDFSQAFPELEVI-G-DRFVIDG---------KYWTSGGASPTFDMMLHLVA 181 Sinorhizobium meliloti
YP_004115162 130 QDFAARFPQIQLDsN-ALYTRDE---------RLITSAGTAAGIDCCLHLVR 171 Pantoea sp. At-9b
YP_001327114 141 EDFSRAFPELQVI-G-DRFVTDG---------KYWTSGGASPTFDMMLHLIA 181 Sinorhizobium medicae WSM419
ZP_16226352  134 LAAQEEFPLVQFT-P-HIFTIDA---------NRFTCSGGLAAIDLGLALVE 174 Acinetobacter baumannii Naval-82
YP_001668923 158 AMMNELFPKVRIS-R-QAHVLDR---------RHMSCAGASSALDMMLAMLE 198 Pseudomonas putida GB-1
ZP_03781203  185 NWKRMFTAAVYWIpN-VSWVADG---------KFYSSSSSLYGIDMALGVVA 226 Blautia hydrogenotrophica DSM 10507
ZP_01966390  126 NWKRMFTVGIDYI-DgEKWISDG---------KYYSCSTTVAAMDMTLALIs 167 Ruminococcus obeum ATCC 29174
YP_943276    490 EQMDALSEKYSLGlN-VLDTRNGeqyihnprsKFMTSGGVTCGLALSLHIVE 540 Psychromonas ingrahamii 37
ZP_01881675  144 PMLEEAGIAERGT-N-TLFNRSG---------NLVTSAGMAATADVVLALIA 184 Roseovarius sp. TM1035
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