Conserved Protein Domain Family
AAA_18

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pfam13238: AAA_18 
AAA domain
Statistics
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PSSM-Id: 315820
View PSSM: pfam13238
Aligned: 60 rows
Threshold Bit Score: 55.8856
Threshold Setting Gi: 254568588
Created: 28-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8TH03          7 VLIGGASGVGTSTIAREVARRLNithlietdhlrevlrGAIDKKYAPVLHMSSYNAYRaLRIPDHMVPKRFRDRVIAGFV 86  Methanopyrus k...
9_pfamImport    1 IIINGTMGVGKSATCRELNKKL-------------------KNSVWLDGDWCWMINPFvVNEENKKMVINNINYLLRSFL 61 
40_pfamImport   1 VLVLGTDGTGKSSLIKNIRKE---------------------IPVKTKSIYLGTGEDGwELKQVKKMNKNFQGPILGRLL 59 
Q28TB4          3 IVLNGYPGVGKLTIGRDLARLL----------------GGRLLDIHSVYNVAFALTEF-KSPEFRATVEKVEAIAHDLIH 65  Jannaschia sp....
Q38AF2        393 IFLCGLPGVGKTTLARLIGEMGGngcstfr-yilhlsrDEVAKCVAEHHGINDSSSKH----KKRRLRSMVHQFVQRAFR 467 Trypanosoma br...
Q4E143        392 IMLCGIPGAGKTTLSLALMAMAErgdspfr-yliylsrDQVARDVAAQEGIDDSSSKH----KQRKLRAMVHHALLEAVK 466 Trypanosoma cruzi
Q2K9V4         27 VILTGASGVGKTTIAEAVERL-----------------HGQEIDVFYKDRIGVPPVQE-MVHQFGSVEGWQRAAIFGWMA 88  Rhizobium etli...
WP_041606520    5 IIINGTMGVGKTTICQRLYKSLN---------------Y----SVWLDGDWCWMMNPFcATEENKRMVEDNITYLLNNFL 65  Halothermothri...
WP_010076333    5 VILCATCGVGKSTVKDYLKEK-----------------STLGTFVFYDSDDMGLNWHD-YKDE----PDGARKYNADCLK 62  Clostridium ce...
WP_003369288    6 IIVNGTMGVGKSTICENLHKTL-------------------LNSAWLDGDWCAMINPFiPSDENKKIVINNITHILNNFL 66  Clostridium bo...
Q8TH03         87 EHASmvkpaid-mvikraVEDASDLVIEGVHLVPGLVRPEDY------QYadv--------hmVILYADE-EEHRERFVK 150 Methanopyrus k...
9_pfamImport   62 TNSSleyi-------ifnWVIHMEEIFDDILEPLNDLNFEII------K--------------ITLICDE-DALKKRILG 113
40_pfamImport  60 KTIIlpiefclrvirgkvNAKYKLILIDRFPGWAIISKNKLR------NYiykiil-pkpdlvIFLHGDP-QILFERKKE 131
Q28TB4         66 ALPD-----------------GEPVVLTTVIAGDSAWGQAEW------QRiialgearppfavVHVTCDL-EENIARIED 121 Jannaschia sp....
Q38AF2        468 QSILls----------flLEGPGLLIFDACNAKPSTRQRWRY------MLprela----sfriVYLACAErNILASRIAG 527 Trypanosoma br...
Q4E143        467 QAVLfs----------liQEGPGLLLMDACNAKAETRRVWRG------KLppkve----sfrlLHVTCSDhPELLRRLAK 526 Trypanosoma cruzi
Q2K9V4         89 RLSPl-------------LTKGRSVLFEGQARFSFLAEAAER------AGigl-------hscILIDCDD-DTRARRLSI 141 Rhizobium etli...
WP_041606520   66 ANSSlkyi-------ifnWVIHHEDIFNLILDKLQKHQYELY------K--------------ISLICSE-RELKRRMLE 117 Halothermothri...
WP_010076333   63 SANY--------------RAKAKNILFFSCMNPLEYEEMPSIegitktYF-------------INLQCSD-EQLYKRLKG 114 Clostridium ce...
WP_003369288   67 ESSSieyv-------ifnWLIESDEIMDLILGNINLKSFKLY------K--------------ITLTCGK-EELLKRV-G 117 Clostridium bo...
Q8TH03        151 RAMEKG-RGGrhleYFRQIRIIH 172 Methanopyrus kandleri
9_pfamImport  114 DVKL----------KLRDEECVS 126
40_pfamImport 132 RSVESI-SK-----DTLKFKSVA 148
Q28TB4        122 AG------------RDHKRKPRD 132 Jannaschia sp. CCS1
Q38AF2        528 RRNHSV-LR-----GAEEAQAAL 544 Trypanosoma brucei
Q4E143        527 RRDHDV-IR-----NNSEAQTVL 543 Trypanosoma cruzi
Q2K9V4        142 DRGQP---------ELANPDMMN 155 Rhizobium etli CFN 42
WP_041606520  118 DGRDEE-TIKvslarlklyekmd 139 Halothermothrix orenii
WP_010076333  115 RPKERMtDSD----EFIESQVey 133 Clostridium cellulovorans
WP_003369288  118 RDILSG-KRD----RNSlnrsle 135 Clostridium botulinum
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