Conserved Protein Domain Family
AAA_11

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pfam13086: AAA_11 
AAA domain
This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.
Statistics
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PSSM-Id: 338593
View PSSM: pfam13086
Aligned: 46 rows
Threshold Bit Score: 154.804
Threshold Setting Gi: 301112122
Created: 29-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74682359    462 TQLRAMGMMLSE-AL--S-LVQGPPGTGKTRVIVETIKLLkh----------------hFQIPHPILVCAHTNVAVDNLL 521
gi 124467162   537 SQANSIKEILQQ-EKgiS-LLQGPPGTGKTHTLIGILSGAyeym-----------kmtdKFPRKKILICAPSNAAIDEII 603
gi 213408549  1276 PQALAIHAACAR-TGf-T-LVQGPPGTGKTKTILGIVSALltsggqgrrfdapgqngntQPGTKKVLICAPSNAAIDEIL 1352
gi 1160565561  814 SQMEAIYHSLIP-HGf-T-LLQGPPGTGKTKTIMALLSVLlstpl---------dskinSTAPPKILVCAPSNAAVDEIA 881
gi 268637806  1375 SQLSAIASTLKNlGGf-S-LLQGPPGTGKTKTILSLLSVFttvlt----------niekSHSDPKILVCAPSNAAVDEIA 1442
gi 67484740    289 SQIECINSALSK-KGf-S-LIQGPPGTGKTKTLLGILGAIifgkpvs-----fnkqgtiKMKHSKILVCAPSNAAVDEIV 360
gi 294881038  1585 gQSKALAYACDA-SKr-AvLLQGPPGTGKTRVVVAILQELlrr---------------qtRRKFPILVSAPSNAAVDEIA 1647
gi 290992230   722 fifpiftmvtkhreyeaiqksaipaplfNTSVLLGLIMALl-------------------ANKKRILVCSGTNVAVDHIV 782
gi 149241697  1353 SQARAIKGTYES-DGf-F-LIQGPPGTGKTKTILGIVGYAlshkesdkiielpqkpaakPSKGGKILICAPSNAAVDELV 1429
gi 255951120  1309 AQARAIKSAVDN-DAf-T-LIQGPPGSGKTKTITALVGSLlsdvlgkqvvkvngapvarNALSKKLLLCAPSNAAVDELV 1385
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74682359    522 AGMVK-------------HGVKAIRTGMAEr-------vPTDLKQYT----LGIKME----------------S---HP- 557
gi 124467162   604 LRIMRpdslfd--sdgkpREVKVIRIGLIDees----efSDTVKKVSleylAQNML------------------------ 653
gi 213408549  1353 LRLKDgifdh----egikFKPKILRVGYSEs-------iNPHVKEFTldekMQEQMQvlnlkknqdngesmqvR---KR- 1417
gi 1160565561  882 SRIIDgdmfd---kdgnsYVPSAIRIGQPSa-------iSRKVQQISleylLEKNSN----------------DpstSL- 934
gi 268637806  1443 LRIKKdglid---kngnkFKPVICRIGN-Qsh------iHPSVQDISveslILGEYK----------------D----K- 1491
gi 67484740    361 LRIQNegiln---gngkkQKVNIIRIGNYAg-------iNSKVNEVLidtlISNELI----------------K---RG- 410
gi 294881038  1648 ARLLNat---------ggQNYKFIRIGNSSrv------tHEAVKGICldamVSEAFK----------------Q---QE- 1692
gi 290992230   783 AKLSQnglinsngekyqlSINKMARIGNDEkidelskriDPATRFKQlqraVKDIIH----------------C---VE- 842
gi 149241697  1430 LRLRNgvkns----kgehMDLKVVRLGRSDa-------iNAAVRDLTleelVDKELQ----------------S---KQq 1479
gi 255951120  1386 MRLKDgvktt----hgrqEKVSVLRLGRSDa-------iNTKVLDVTleemVNARLN----------------Q---DPs 1435
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74682359    558 ---------------M------------------WTCVQT--MTEKTKRLKDEI-------------------------- 576
gi 124467162   654 ------------------------------------LKSQ--IIKQEADQKTTAdlridickiqnq-------------- 681
gi 213408549  1418 ---------------H------------------DEILKE--RDALRAQLEKARnsgindpav----------------- 1445
gi 1160565561  935 ---------------N------------------FEQSKI--ISVR-EKLAEINsslesvkqkistlqrslg-------- 970
gi 268637806  1492 ---------------N------------------SAIANE--DQKKENTRLKIIkikekqveidkqikdlae-------- 1528
gi 67484740    411 ---------------Y------------------NEQKRTenVSSKIASIEQKMraltkeiedttialnnekekvvsstk 457
gi 294881038  1693 ---------------T------------------LRNDDY--VKSRDERYAAIKaldvqiqea----------------- 1720
gi 290992230   843 ---------------LirkelfevmeksrqsntaFNARNS--IKGRTEKVIKLIknteetitkllltklinqem------ 899
gi 149241697  1480 edviid---pgiraeH------------------TKKVKE--RDQIKTRLSTESlsskeidkl----------------- 1519
gi 255951120  1436 kgngvdlqklyeehkT------------------TDTSFK--ELRARLDEARAKglpppeel------------------ 1477
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74682359    577 --------------------FRLDFGNPERQQKSSELKKIWRQIWGIQQSIT-----------RELLLDADVVCTTCISA 625
gi 124467162   682 --------ikklqkikkqdlTDQSTYSEQLSNLKSDLSIKQQYLERMRAKKIqykes-ynlfcEKILNEAEIICSTLNSS 752
gi 213408549  1446 ------------emklrevmKTKNQLEQRLDDMRRQQGIANRNMDIAKKQIQ-----------SQLLKDAEIICSTLSAS 1502
gi 1160565561  971 ---tslgtatdstrdlttlyHEKDRLFKEIQATKDSEKKVSDVLESARKNMA-----------HSLLNKCNIILSTLSGS 1036
gi 268637806  1529 --rlkqqednklrneitklnYTREKYNNDLKLAKDEERRFHEQYSNTKRNLY-----------INIIGRSQIILSTLSGS 1595
gi 67484740    458 endkkinrihkytqtlkemnNKRDAFRVTLQQMKSEKGKIQRDFAKIRKEIT-----------KQLFEEADILCCTLNTS 526
gi 294881038  1721 ------------adqkavvdSLRAKRRGLVEALHKARDVYKNTMRQGRDAIQ-----------SRYLRGADVLFGTLNSY 1777
gi 290992230   900 -vntvsekfskvtehiqtflEFGNNNEAKKIDLKNGAEDIYQEIDSFYKELQvylvvdnrdveKKILDNCDLVFATLAIT 978
gi 149241697  1520 ------------etrlrevnKERSDLAKKLDEQRERASIAYRSREIGRRTIQ-----------TKILDDAQVLCATLSGS 1576
gi 255951120  1478 ------------erefdlmkKKRSQLSTSIDKARDQNHTLARNADMHKRRIQ-----------EQIINESHVICTTLSGS 1534
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 74682359    626 I-S-ANLNSI---DFPIVFLDEASMATEPLTLLPLMKGsSHVAIIGDHKQLPPVIVSQ 678
gi 124467162   753 G-S-EKLSKYm-dQIELLIVDEAAQCTEPSNIIPLRLGvEKMILIGDPKQLAATTFSP 807
gi 213408549  1503 G-H-DILLKSg-iSFPSVIIDEAAQAVELSALIPLKYGcERCIMVGDPNQLPPTVLSK 1557
gi 1160565561 1037 G-HqETFSAIk--KFDVVIIDEAAQAVEPSTLIPLKHNvMKCILVGDPNQLPPTIISR 1091
gi 268637806  1596 G-Y-DYLFTAt-kNFDLVIVDEAAQAVELSTLIPLRHDvKKCILVGDPQQLPPTTISK 1650
gi 67484740    527 G-S-DIFLNCikeKIENVIIDEAAQSVEISTLIPLRFGaERCILIGDPQQLPATVISv 582
gi 294881038  1778 GsS-SVTRNLpvgRAEVCLIDEAAQAHEVASLIPLRFDpQRLILVGDPQQLPATVLSM 1834
gi 290992230   979 G-R-HLMRSCk--AFDIIIIDEAAQVTESESVIPLDLAtEKLVLIGDPKQLPSTVISn 1032
gi 149241697  1577 A-H-ELISSLs-vKFDQVIIDEACQCLELSAIIPLRYGcRKCIMVGDPNQLPPTVLSQ 1631
gi 255951120  1535 G-H-EIFQSMn-vEFETVIIDEAAQCIELSALIPLKYGcSKCVLVGDPKQLPPTVLSK 1589
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