3N5L


Conserved Protein Domain Family
Phosphonate-bd

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pfam12974: Phosphonate-bd 
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ABC transporter, phosphonate, periplasmic substrate-binding protein
This is a family of periplasmic proteins which are part of the transport system for alkylphosphonate uptake.
Statistics
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PSSM-Id: 338570
View PSSM: pfam12974
Aligned: 104 rows
Threshold Bit Score: 123.528
Threshold Setting Gi: 147851820
Created: 31-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3N5L_A         8 FGIISTESSQNLKSIWEPFLKDXSQQTGYQVKAFFAPDYAGIIQGXRFDKVDIAWYGNKAAXEAVDRAHg---EIFAQTV 84  Pseudomonas aer...
Q67JE6        79 VGLATMMSPRESLLRYGPLLDYLNSKLERHVEVVLASSQTEMLELLRTGGVQLGLVGSLAYVQGADGFGl---KALAVPE 155 Symbiobacterium...
Q0AC64        35 IGLTPVILEDQLS-FLDEWQTYLERRTGREVQFVRRNSYGEVVELALRGRIDFAWLCGYPYVQHDTRLG-----LLAVPR 108 Alkalilimnicola...
Q21TU8        32 VAMTPAFLHDQ-HALLAEWRDYLKFRLNRPVEFVQRDRYRDTMDLLQQQKVEFAWICDYPYVALKK--Dv---RLLAVAL 105 Rhodoferax ferr...
Q24PX6        47 IAVASVITPMENVDLYGDLLNLLGERVDMQAQMVQRENYSDTNHLIENGDVQVAFICSGALLGRDKAEQa---ERILVAP 123 Desulfitobacter...
WP_013010232  25 IGIASIVSPDESLALYYDFNNYIGNKLGMEVETIIKRDYDVMNRMIKDSAVDVAFICTGAIAAL-DESEv---RILAVPE 100 Denitrovibrio a...
CAK29314      61 ITEEPYYQQEKMNRKMKALEDYLEKSGEIDVEYVPAINYAHSHQLLLSGKVDLLWAGSLGVAQVEEQDKdnliQPLAVEK 140 Synechococcus s...
WP_012675309  25 LAVLSSGNPVDEYRKFKALSNYLSNVLDREVQLKIVGKYTQLLDLYEEQHIDISISCPVVFYKIKEKHNv---EATAVVK 101 Persephonella m...
WP_015774170  46 YAYLPQYSHSVSFERHRRLLEYLRHKTGLSLRQVFPNTFAEHIKMVERGEIDISFTNPFVYISLARL-Gs---EAFARIV 121 Desulfomicrobiu...
WP_012663263  30 LSMLPRYYPKKIKEMIVPLAEYLSKEIGATITAVLTKDFTEYENQLKNGEIEIGFENPLVYTKVSQKH-----EVLAMAI 104 Desulfobacteriu...
3N5L_A        85 AasgapGYWSLLIANK-DsK-I---------DSLEDxlanAKSLTFGNGDPNSTSgYLVPGYYvF-AKNN-VDPVKAf-- 149 Pseudomonas aer...
Q67JE6       156 yqg-epTHRSLILVRR-YsG-L---------EEFAH----LKGHTFAYTDPVSATgWLYPQTL-V-LELN-EAVERFf-- 214 Symbiobacterium...
Q0AC64       109 fng-apLYQAYLIVPA-NdQaT---------ESIKD----LAGRVFAYSDPNSNSgWLYGQQL-L-DEAGvMDPERFf-- 169 Alkalilimnicola...
Q21TU8       106 Neg-kpTYRSYLIVPTrDtR-T---------RSIGD----LKGSVFAYADPYSNTgYLSPRFE-I-KRSG-ADPATYf-- 165 Rhodoferax ferr...
Q24PX6       124 EiagssKYRSYIIVPA-HsP-A---------HFFRD----LKGKTFAYTDPLSFSgRIAPQYM-L-KKAG-YNPSSFf-- 183 Desulfitobacter...
WP_013010232 101 Vag-kqSYRSYIITNK-SfD-I---------KNISD----LEGRSFAFTDRLSNSgTIYPSYL-LiQHFN-KSPEKIl-- 160 Denitrovibrio a...
CAK29314     141 p-----SFVNVLLVSK-QaS-SalkqslkekNPLRS----LKRKRVLFGSRSSGSsFLTPLLE-M-KDQG-VALSDLks- 205 Synechococcus s...
WP_012675309 102 Idg-miLEAGVIVVRK-DsD-I---------KDVND----LRDKKVTLGSSICASnCIMPLYI-L-SKEG-ITYRDIp-- 160 Persephonella m...
WP_015774170 122 EpdggaNFQGQIIVRA-DnPaI---------NSLAD----CRGKRIIAVDPNSAGgFLYPLGL-F-FDHG-ITQKDFqef 184 Desulfomicrobiu...
WP_012663263 105 QekggnQFRGIIITRP-DsN-I---------QLFSD----LRHKKIIIVGKTSAGgFLSQKLS-L-AKNG-ILVEKDc-- 164 Desulfobacteriu...
3N5L_A       150 --KRT--LNSSHEVNALAVANKQVDVATFNTEGXERLEltqPekarqlKVIWKSPLIpGDPLVWRNNLS----DEQKNKL 221 Pseudomonas aer...
Q67JE6       215 --DRAl-FTGTDDKAIQALDHGLVDGAAVNSVIYDMAVaedPdlarrlRAIGSSEPLgSPPVVVSPTVG----SELVAQL 287 Symbiobacterium...
Q0AC64       170 --LRTf-FTFSHRKVVEAVAERVAHGGLVDGYVWETLAldrPdltgrtRVVHRSEPFgFPPLVASPGTT----EGERRAL 242 Alkalilimnicola...
Q21TU8       166 --RRTf-FTWSHRKAIDAVAAGLAQGASVDSFVWDALSkvrPditaktRIAWKSEEYgFPPLVAQSHVP----EADFLLM 238 Rhodoferax ferr...
Q24PX6       184 --SKTi-FTYSHDNSIKAVAEGLVHGAAVDSLIYDLTLsrrPelmdkiKVIDQSEEVgNPPVVVSSQID----PELRARI 256 Desulfitobacter...
WP_013010232 161 --RKIy-YTKSHDKSIFLINKGVVEAAAVDSLIFEFIKkkqPekveniKIIYTLPEMtSPPVVASSHIS----DEIFNKI 233 Denitrovibrio a...
CAK29314     206 -cAYE--PHHGHRADYFA-SSRDYDFAFMPGQAEDPLRlvsPsaqadvEVAWLSEPKrNYSVLVSEGNSspqrDQALKAI 281 Synechococcus s...
WP_012675309 161 --DMW--SSGSDKAAILAVISGLADAAGVKEESALLFIdr-------iRIIAKSPYVpRLVVAVSKDIP----EDLRVRI 225 Persephonella m...
WP_015774170 185 sfATG--AGGRQEAVVLAVYTGAYDVGTIRKGTLDVVRdkid--meqiRVLAESRPYpGWVYSVRKGFD----PAIKDKI 256 Desulfomicrobiu...
WP_012663263 165 --DIEeaANNKQENVIISVSIGDADAGFIRESALHIAd--qYiqpgsvVVMTPCEWLpNWAISVNRAMP----GPVKAAI 236 Desulfobacteriu...
3N5L_A       222 RDFFFKYGA-N--AEQKKVLADLQWSKFQASDDDQL 254 Pseudomonas aeruginosa PAO1
Q67JE6       288 ESVFLQMGE-D--EEGRAVLQSLRLDRFVAPDPAWY 320 Symbiobacterium thermophilum
Q0AC64       243 QEALFGMDE-D--QRGRELLERLNLERFEAGDESLY 275 Alkalilimnicola ehrlichii MLHE-1
Q21TU8       239 QDVLLNMKN-D--AHGRSLLARLNLTGFIAGSPKLY 271 Rhodoferax ferrireducens T118
Q24PX6       257 KNVFLTLHL-D--DEGRKALRLLQFDRFVHADLDLY 289 Desulfitobacterium hafniense Y51
WP_013010232 234 RYLLLNMDK-D--PDGVKILKFLNIDRFVEAEMEDF 266 Denitrovibrio acetiphilus
CAK29314     282 QSALTAMDL-SsgSGSGELLKVMGVAGFDLPADDVY 316 Synechococcus sp. RCC307
WP_012675309 226 KKALYDLN-------DEKTLKRLGIDGFEKPEKRMF 254 Persephonella marina
WP_015774170 257 ARALLDLSMnR--REDATVLAAAGMIDIISARDEDY 290 Desulfomicrobium baculatum
WP_012663263 237 KSAILALDK------NSPVLKAMHIAGFKSAVDSEY 266 Desulfobacterium autotrophicum
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