3N5L


Conserved Protein Domain Family
Phosphonate-bd

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pfam12974: Phosphonate-bd 
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ABC transporter, phosphonate, periplasmic substrate-binding protein
This is a family of periplasmic proteins which are part of the transport system for alkylphosphonate uptake.
Statistics
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Aligned: 95 rows
Threshold Bit Score: 123.907
Threshold Setting Gi: 147851820
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3N5L_B          8 FGIISTESSQNLKSIWEPFLKDXSQQTGYQVKAFFAPDYAGIIQGXRFDKVDIAWYGNK-AAXEAVDRAHg---EIFAQT 83  Pseudomonas ae...
CAK29314       61 ITEEPYYQQEKMNRKMKALEDYLEKSGEIDVEYVPAINYAHSHQLLLSGKVDLLWAGSL-GVAQVEEQDKdnliQPLAVE 139 Synechococcus ...
jgi:Tgr7_1298  53 FGLLPFASPVALFERFAPLRDYLNVQLGTQFVLETARDFSVHVQRIETGDYHLLLTAPH-FVPIALDSGHy---ELLAAY 128 Thioalkalivibr...
WP_012982891   45 LGIQPFASPQALFQRYAPLREWLADLRQAPVHLEASRDFPRFIERLSEERYDVAIVAPH-VVPLLGETSAy---RPIARS 120 Thioalkalivibr...
jgi:Tgr7_1117  32 MGVFPYFSPTRLEEIYAPVAAELSSATGQPVRFRTASTFARFFENLRDGDYDIALIQPL-YYVPAADEFGy---LPLARV 107 Thioalkalivibr...
Q3SME0         32 FGVFPKLTARQTVTAYLPLAKSMEKQLGRPVAIYSARDFETFVERTARGEYDIVLTAPH-LAWLARQDAGy---APLVKY 107 Thiobacillus d...
Q478C0         39 LGIAPHTSARVILEMYQPLRQSLEAALKQPVEVQTAPDFSEFARRALNQEYDIAVTTGH-QARLYQTDAAy---LPLLTY 114 Dechloromonas ...
WP_012469632   29 IGVAPHTSARIILEMYQPLRLHLEKSLGMPVDIVTATDFNAFARRGLAQEFDVAITTGQ-QARLLQVDAGy---QPLVTY 104 Geobacter lovleyi
Q47K13         36 VGLMPYLSTRTLLANYQPIAAALEDALKQPVQLLTAPDFDTFVRRVLDGEYDIALLAPH-YARLAIKSYGy---TPLLLH 111 Dechloromonas ...
jgi:Tgr7_2897  42 FSAAPRETPEQGEQLYGPLVERMSEVLGVPVIYRHPGSWLTYQRDMRNDAYDILLDGPHlIAWRMAEL-Nh---RPVARM 117 Thioalkalivibr...
3N5L_B         84 vAasgaPGYWSLLIANKDSK-I---------DSLEDXlanaKSLTFGNGDPNSTSGYLVPGYYVfAKNNVDPVKA--F-K 150 Pseudomonas ae...
CAK29314      140 k-----PSFVNVLLVSKQAS-SalkqslkekNPLRSL----KRKRVLFGSRSSGSSFLTPLLEM-KDQGVALSDLksC-A 207 Synechococcus ...
jgi:Tgr7_1298 129 kE-----DLSTVYLVGRDDP-A---------ADLSAL----AGRRIGTPPPEALI-TLVGEDHLlKVLG---DQA--P-A 182 Thioalkalivibr...
WP_012982891  121 rD-----TLAMIIVAPVDAP-P---------RQLTDL----EDATLATPARHSLGTRLARER-I--RAVFDTEDP--PiH 176 Thioalkalivibr...
jgi:Tgr7_1117 108 r-----EPFRSVVVTLDSSP-L---------RQLEEL----RGGLIAS-PPTHVPAVHLARQAL-RERGLVPDRD--L-S 163 Thioalkalivibr...
Q3SME0        108 aE-----PTRGLLVVARASA-Y---------RRPEEM----RGRTIATADAIAVT-VLAAEAEL-AARGIERQID--Y-Q 163 Thiobacillus d...
Q478C0        115 v-----AEFKAVALVDKNGP-I---------HTAADL----KGKSVLGLSPTSLV-TLWGQQWL-KKQNLG---D--V-P 167 Dechloromonas ...
WP_012469632  105 k-----ADFKAVALVPSTAH-Y---------RSAADL----KGKTALGLSPTSQV-TVWGQHWL-ADNSLQ---G--M-P 157 Geobacter lovleyi
Q47K13        112 kS-----PIRGVLVSSRAQP-L---------ASFNDL----RGQNIAIVDRSALL-VIAGAITL-GENGLTEGSD--Y-H 167 Dechloromonas ...
jgi:Tgr7_2897 118 pG-----TLRFYLLVREGDDsV---------GALQDL----VARKICSVAPP----NLAPLVML-AEY---PDVI--R-Q 168 Thioalkalivibr...
3N5L_B        151 RT-LN--S--SHEVNALAVANKQVDVAT--FNTEGXERLE--LTQpek-----arqLKVIWKSPLIpGDPLVWRNNLS-- 214 Pseudomonas ae...
CAK29314      208 YE-PH--H--GHRADYFA-SSRDYDFAF--MPGQAEDPLR--LVSpsa-----qadVEVAWLSEPKrNYSVLVSEGNSsp 272 Synechococcus ...
jgi:Tgr7_1298 183 PT-FVpfP--SHNAAIHAIASGLVDAAA--VSINVARLDI--NRGv---------pVRILDETPQFpGVGILARKDLA-- 244 Thioalkalivibr...
WP_012982891  177 YL-EF--P--HHNAAAAAMQRGLAEAAVlvIDARALESPRspQEGprtialadgslARILAQSDPFpGVTIVLHERVQ-- 249 Thioalkalivibr...
jgi:Tgr7_1117 164 FR-EF--N--TADSCLQQVLIGAADACV--TGPLGARSFE--LRHsv--------kLRTLLETISLpSLVFVVHPRVP-- 224 Thioalkalivibr...
Q3SME0        164 TR-DA--G--THYNAVMQVLNGRADAAM--LGLHPYLLLPsev----------rarLRILAETGPLsSLMYLTHPRLP-- 224 Thiobacillus d...
Q478C0        168 -VrYV--S--AADSVSRQVLAGEAAAAF--TSLA---NYQ--KLPpdi-----rprMRILAESEPMaGRVYMLNKRWS-- 228 Dechloromonas ...
WP_012469632  158 IK-YV--S--ASDSVAHLLVAGEAAVGF--TSLANYQK-----LPldl-----rgkLHLFAQSKSMpGRVYMLNKR-R-- 217 Geobacter lovleyi
Q47K13        168 FI-ET--V--SHSSALHNAISGKARAAL--VSYSTLVLAApel----------qrdALLWRDIASIpGQFYIAHSRVP-- 228 Dechloromonas ...
jgi:Tgr7_2897 169 PViHS--ArrGMRQAFDEFRAGECDAVA--LPTNFYHNQL--SDder-------rgTRILFESPPLpNQGFSVGERVD-- 233 Thioalkalivibr...
3N5L_B        215 --DEQKNKLRDFFFKYGAN--AEQKKVLADL--QWS-KFQASDDDQL 254 Pseudomonas aeruginosa PAO1
CAK29314      273 qrDQALKAIQSALTAMDLSsgSGSGELLKVM--GVA-GFDLPADDVY 316 Synechococcus sp. RCC307
jgi:Tgr7_1298 245 --EPLREALRETLISMTDR--EDGSDVLRVM--IYA-GYKAASAEDY 284 Thioalkalivibrio sulfidiphilus HL-EbGr7
WP_012982891  250 --TNDL-DLQTQLLELSST--TSGQQRLRAF--GHSrGFEPASPEDY 289 Thioalkalivibrio sp. K90mix
jgi:Tgr7_1117 225 --ETDRAALLEALVGLNTT--EHGRQILERI--NTA-AFVPALDHDY 264 Thioalkalivibrio sulfidiphilus HL-EbGr7
Q3SME0        225 --ARDAEAVRRGILAFAGT--AEGTRFLQQG--GYG-SFIAADGSEL 264 Thiobacillus denitrificans ATCC 25259
Q478C0        229 --KE-RKGIEKALWAFAAT--PEGKAYFEQN--KLD-GYRNLKPREL 267 Dechloromonas aromatica RCB
WP_012469632  218 --AALKKKIEVALRGFAAS--AEGKQYFNSN--KLE-GYRLLKRDEL 257 Geobacter lovleyi
Q47K13        229 --PARQLAVKAALLAFEKT--PEGQLFFEKT--KHG-GFREPTAEDY 268 Dechloromonas aromatica RCB
jgi:Tgr7_2897 234 --EVQSARLRELMTATN-E--PAVAAVLRTFarDAQ-VFIPANDDEY 274 Thioalkalivibrio sulfidiphilus HL-EbGr7
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