Conserved Protein Domain Family
ANAPC4_WD40

?
pfam12894: ANAPC4_WD40 
Anaphase-promoting complex subunit 4 WD40 domain
Apc4 contains an N-terminal propeller-shaped WD40 domain.The N-terminus of Afi1 serves to stabilize the union between Apc4 and Apc5, both of which lie towards the bottom-front of the APC,
Statistics
?
PSSM-Id: 315554
View PSSM: pfam12894
Aligned: 24 rows
Threshold Bit Score: 110.06
Threshold Setting Gi: 734683635
Created: 28-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q17Q34        28 LKWSEKMDLLAIGNDKGEVILHRLKWQKVWQLp--------pPEEGLLVR--GIAWRPLEKVMAIAYSNGTVILINIENK 97  yellow fever mo...
Q6BWV1        23 LSWCPTMDLLAISMNRMSIWVFRINGERIYSI-----------NNKSLIL--DISWNPNGKFFCVSGIDGYCKIYDSNSG 89  Debaryomyces ha...
Q5BEX5        29 ITYCPSMDLIAVVSDDEELRVFRLNGQKVFGGsykgdpyldnDDGSGEIR--AVRWKIDGHFLAVVCADSTVRIISAYSG 106 Aspergillus nid...
XP_002543327  45 LTYCPTMDLVALATEDEQVHVFRLNGQKVFGGfarg---ggaAADGLKVK--SLKWKGNGHLLAVATSDNNVRILSAYSG 119 Uncinocarpus re...
XP_010762053  26 MSYCPTMDLIALASADERVDVFRLNGQRVFGGvygg---ggrGGSGREVR--GLKWKGNGHLLAVVCSDNIIRILSAYSG 100 Paracoccidioide...
XP_002849934  36 FAYCPNMDLVAIVTEDEQLNAYRLNGQRVFGGaygl---gedDGKGGLVRavGLKWKENGRVLAVACSDNRIRLLSSYSG 112 Arthroderma ota...
XP_002556793  25 VAYCPTMDLIALATEDEELRVFRLNGQRVFGGsfggdpylgeDEEDGEIR--GMAWKGNGHLLAVACGDGSLRIISSYTG 102 Penicillium chr...
BAE56101      34 LKYCPTIDLISLVTEDDELRVFRLNGQKVFGGsfkgdpyldeDDGGGEIR--KLMWKNNGHLLAVACADNTIRIISAYSG 111 Aspergillus ory...
XP_002173398  33 LSLCPTMDLQAFVTDANQLYVCRRNGHIIWEL-----------KRDETVT--ALCWHFKGEMLAVGYGNGEIELLEVVNG 99  Schizosaccharom...
XP_002146022  41 LTYCPTMDLIALATEDEQLYVFRLNGQEVLSAdlag--dpylDEVKGEIR--GVRWKNDGRLLAVADAENKLRIISSYTG 116 Talaromyces mar...
Q17Q34        98 EEIYNFNVKSD-----------------------ITCMNWTEN 117 yellow fever mosquito
Q6BWV1        90 KLINTIDSKQKs----------------------INLINWCYH 110 Debaryomyces hansenii
Q5BEX5       107 KMAHHYqahgg------------------eqspkVTCLGWGMN 131 Aspergillus nidulans
XP_002543327 120 KTVHVLPCNASleygvgvrpr----epvpnvapsICCLGWGVN 158 Uncinocarpus reesii 1704
XP_010762053 101 KIVHQLPCGPLlashstasvppsslspaadavtcVSCLGWGMN 143 Paracoccidioides brasiliensis Pb18
XP_002849934 113 KMVHSLTAQSApipfslp----------qkpagtVSCIGWGVS 145 Arthroderma otae CBS 113480
XP_002556793 103 KTVHHYQTYQGkeeqpnp----------knptpkAMCVGWGVN 135 Penicillium chrysogenum Wisconsin 54-1255
BAE56101     112 KIVHHYPVYeeqsda--------------drsvkVTCLGWGVN 140 Aspergillus oryzae RIB40
XP_002173398 100 RTAEKIQTGSTg---------------------rITSIAWSVQ 121 Schizosaccharomyces japonicus yFS275
XP_002146022 117 KTVHHFSCLPHeaeghssspn---estkdpkdirITCIGWGVN 156 Talaromyces marneffei ATCC 18224
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap