4DGW


Conserved Protein Domain Family
zf-met

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pfam12874: zf-met 
Click on image for an interactive view with Cn3D
Zinc-finger of C2H2 type
This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found in multiple copies in a wide range of proteins from plants to metazoans. Some member proteins, particularly those from plants, are annotated as being RNA-binding.
Statistics
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PSSM-Id: 338531
View PSSM: pfam12874
Aligned: 301 rows
Threshold Bit Score: 28.6454
Threshold Setting Gi: 74832338
Created: 10-Apr-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4DGW_A       294 YCPFCSRWFKTSSVFESHLVGKIH 317 Saccharomyces cerevisiae S288c
Q16QC5       230 MCTACERVFSHQQTVRIHYRIHTN 253 yellow fever mosquito
Q6FMS8        26 YCQVCNKQCRDQNGFKSHVKSPSH 49  [Candida] glabrata
Q7S742        27 YCQLCEKSCRDENGYKMHCQSPSH 50  Neurospora crassa
XP_002444553  65 YCLHCDRYFASESVKDDHYRSKRH 88  sorghum
XP_002849440  96 YCQDCQRTFQNQNSLNMHLRSKVH 119 Arthroderma otae CBS 113480
CAF97152       2 TCPICQMLLPNQCSFLSHQRIHQH 25  spotted green pufferfish
CRZ25941      34 YCVECDRYFIDEKSLISHKSSKVH 57  Brugia malayi
EMG50621      56 FCPICDVSFRDNLLLIDHLNSPQH 79  Candida maltosa Xu316
XP_001319081  74 VCPVCEIYFRDSALFLKHLNSPEH 97  Trichomonas vaginalis G3
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