Conserved Protein Domain Family
HTH_19

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pfam12844: HTH_19 
Helix-turn-helix domain
Members of this family contains a DNA-binding helix-turn-helix domain. This family contains many example antitoxins from bacterial toxin-antitoxin systems. These antitoxins are likely to be DNA-binding domains.
Statistics
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Aligned: 36 rows
Threshold Bit Score: 34.1441
Threshold Setting Gi: 81595826
Created: 1-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2SLS3              18 AQRLKELRSHFGY-TQQKVVDgvnellpLIQHRphplcRSRYAKWELNn--RTeMPDYPEL-------LALCHYFEQEPY 87  Hahella c...
EFH30199             4 GDALKEVQVELGL-TAEEMTA-------GVIS------KGTYSKVINN---KT-RLSSDLL-------LKILFSHGIDIE 58  Lactobaci...
jgi:Bphy_7538       12 GERLLRARKNRGF-TQKQVEM-------HVGIA-----QSNLAELELK------GTGSSFT-------VSLALLYGVNPV 65  Paraburkh...
wucgs:EUBELI_20065 138 GSMLKCVRDINGItDQLMISE-------DLGIS-----RYKYSKIENN---KE-YPDAMVL-------IRLYELYGYLPT 194 [Eubacter...
jgi:Maqu_1673        8 NRRLRRIREQGQL-SLGDVAE-------MCGVD-----EARVRSWEATdarQRgYPGVSEL-------LDFCLKTETPLE 67  Marinobac...
Q11MK1              53 GKFVNLMRRRRGF-SMEQLAQ-------AADLD-----ASELLVIEDD---VHyVPEPRTV-------FKLAETFEVSQR 109 Chelativo...
Q1QFC5              53 GRFINLMRRQRGF-SMERLAE-------EAELD-----ASELLVIEGD---VHyIPEPRTV-------YRLAQTFNVSQQ 109 Nitrobact...
jgi:Cpin_0919       87 GGRLMELIGERGL-NKTRLAK-------RLGMSr----RTMYNLFEKE------VFGAEEL-------DRVVRALEMTTT 141 Chitinoph...
jgi:PsycPRwf_1330   21 GRNLAAARKNAGM-TQAEVMRiv----wNVDNN-----RNRISEIENG---NKdLTLIDLLifqnlynQSLDYICGLSVE 87  Psychroba...
jgi:Haur_0527        7 GAYLWTLREAIGL-SRDDVAH-------EAGTN-----NVQIMRIEKG---EI-DTRGSLL-------LSVVRAVKGNAE 62  Herpetosi...
Q2SLS3              88 YLLTGVNG 95  Hahella chejuensis KCTC 2396
EFH30199            59 VFFNKTKD 66  Lactobacillus jensenii JV-V16
jgi:Bphy_7538       66 WLALGKGP 73  Paraburkholderia phymatum STM815
wucgs:EUBELI_20065 195 MYLDLYDV 202 [Eubacterium] eligens ATCC 27750
jgi:Maqu_1673       68 RLLDMDDD 75  Marinobacter hydrocarbonoclasticus VT8
Q11MK1             110 RLMQLAGL 117 Chelativorans sp. BNC1
Q1QFC5             110 RLMQLAGL 117 Nitrobacter hamburgensis X14
jgi:Cpin_0919      142 SFLHPGAL 149 Chitinophaga pinensis DSM 2588
jgi:PsycPRwf_1330   88 PELDMLAS 95  Psychrobacter sp. PRwf-1
jgi:Haur_0527       63 HIAQLLLD 70  Herpetosiphon aurantiacus DSM 785
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