Conserved Protein Domain Family
Fer4_7

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pfam12838: Fer4_7 
4Fe-4S dicluster domain
Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Statistics
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PSSM-Id: 338514
View PSSM: pfam12838
Aligned: 208 rows
Threshold Bit Score: 27.8735
Threshold Setting Gi: 501054633
Created: 29-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6LKJ5        62 LCQSCNYCETACV-QQVIEMVE-------------------GR---------------PQL---------------NLDY 91  Photobacterium ...
Q30WB2        20 ACMKCGMCQAVCP-VFAETMREadv--------------trGKiallenlahemikdpESV---------------QERV 69  Desulfovibrio a...
Q6APH4        20 SCMKCGMCQAVCP-VFAETMHEgdv--------------trGK---------------IALleqlaremikdsdqvNEKL 69  Desulfotalea ps...
Q4JC55        10 KCVHCGFCLESCP-TYVVTRSEihs--------------prGRit------------aVKL---------------GIDS 47  Sulfolobus acid...
Q97U61        10 mCTHCGFCLETCP-TYVVTRNEvhs--------------prGRi--------------E-Avri---------ginSTGF 50  Sulfolobus solf...
WP_011932146  25 pCVHCGFCLPTCA-SYRVLGTEmds--------------prGRihtlkaieagelaldATV---------------ASHF 74  Synechococcus s...
WP_013157889  23 ACVHCGFCLPACP-TYAVLGEEmds--------------prGRifl----------mkE-Vlegsl-----pleetLPYL 71  Meiothermus sil...
WP_024050598  23 ACVHCGFCLPACPtYQVLG-EEmdsprgriflmkevlegnlSM---------------EEA---------------QPYL 71  Meiothermus ruber
WP_012223407  24 ACVHCGICLSHCP-TYQVRHEEnds--------------prGRiflmkdmyekggapdART---------------VLHL 73  Gluconacetobact...
WP_012545281  22 RCMKCGNCMSACP-IYNVEKKEssv--------------arGKialge------avlsDEI---------------NIDD 65  Thermodesulfovi...
Q6LKJ5        92 N---H-------CTQCGECQKACLSGA 108 Photobacterium profundum
Q30WB2        70 N---K-------CLLCGSCAANCPSGV 86  Desulfovibrio alaskensis G20
Q6APH4        70 T---K-------CLLCGSCAAACPSGV 86  Desulfotalea psychrophila
Q4JC55        48 EglkT-------CMFCRKCEIACPSGV 67  Sulfolobus acidocaldarius
Q97U61        51 E---T-------CMYCRLCETACPAGV 67  Sulfolobus solfataricus
WP_011932146  75 D---S-------CLGCFACVSACPSGV 91  Synechococcus sp. WH 7803
WP_013157889  72 D---R-------CLGCLGCVTACPSGV 88  Meiothermus silvanus
WP_024050598  72 D---K-------CLGCQGCVTACPSGV 88  Meiothermus ruber
WP_012223407  74 D---R-------CLTCLACEAICPSGV 90  Gluconacetobacter diazotrophicus
WP_012545281  66 E---TlvklifnCLVCKSCMLACPSGV 89  Thermodesulfovibrio
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