5ME3


Conserved Protein Domain Family
Cohesin_HEAT

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pfam12765: Cohesin_HEAT 
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HEAT repeat associated with sister chromatid cohesion
This HEAT repeat is found most frequently in sister chromatid cohesion proteins such as Nipped-B. HEAT repeats are found tandemly repeated in many proteins, and they appear to serve as flexible scaffolding on which other components can assemble.
Statistics
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PSSM-Id: 338479
View PSSM: pfam12765
Aligned: 46 rows
Threshold Bit Score: 34.3558
Threshold Setting Gi: 254571013
Created: 29-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ME3_A        331 RCLALLISKDKNMLYTP----IVKETIENrLTDSSPLVKDAILELI 372  Ashbya gossypii ATCC 10895
Q09725        801 RIINQMKTIPSILRTHP----EVLAQIISkSNDQSAIVRDTVLDLL 842  Schizosaccharomyces pombe 972h-
XP_001625727   82 RMIGELACADTTMGGTQ----SMQSLVASfAVDSDSRVRTTALQAL 123  starlet sea anemone
XP_001775874  966 LALCKLMAINADFCDQ-----NLQLLFTVaQSSGEAAVRSNCIIAL 1006 Physcomitrella patens
KZN87168     1278 RALSG----QSNLSDLP----EIHEKVIAyIEDSDAEVREAAIQAV 1315 Penicillium chrysogenum
XP_002172062  791 RILNHMNDLPKILRTQP----VLLNQVIGkLNDNSAVARELAVDLL 832  Schizosaccharomyces japonicus yFS275
XP_001321836  365 GALSSIVEYTGNT--------DFFDVLKHsLLDEKVVVRKSSLNFL 402  Trichomonas vaginalis G3
XP_001313074  388 KDHEDKGLILENIDTNK----FMIKILKArSVDEKLVVRRASLETI 429  Trichomonas vaginalis G3
XP_001581674  458 KAIFNILQSNESISAQS----IVLQELQRaMSDLDLSVRCAVLESI 499  Trichomonas vaginalis G3
WP_012807431  232 GETAGRGTKFDTGVSAParvePFLDTVAErATDPEPQVRAAALKTL 277  Halomicrobium mukohataei
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