Conserved Protein Domain Family
Zn_Tnp_IS1595

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pfam12760: Zn_Tnp_IS1595 
Transposase zinc-ribbon domain
This zinc binding domain is found in a range of transposase proteins such as ISSPO8, ISSOD11, ISRSSP2 etc. It is likely a zinc-binding beta ribbon domain that could bind the DNA.
Statistics
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PSSM-Id: 338477
View PSSM: pfam12760
Aligned: 37 rows
Threshold Bit Score: 36.5629
Threshold Setting Gi: 268561704
Created: 29-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 81350624    21 PDDEACLEHIFNVRFGAR-----HVCRACGVEsTFHRMSD---------RRAFACAA--CGDH 67
gi 122477360   22 AGEEKAYETFCKLRWPATdg--ePVCPFCGGL-DAYRITT---------RRRFKCKA--CLRQ 70
gi 122418871   31 LSDDEAYETFRLIRWAATdg--tPVCPRCDCA-GVYTYTT---------RRLFKCKA--CSHQ 79
gi 81423261    28 LSDVEILSLLKTARWGNAdnindIECPHCHVRhEAYFIKT---------RQQWQCKH--CCYR 79
gi 1128997187  22 LADAEIQALLKKARWGTEd---eQVCPHCGVRhSAYFTNT---------RQQWQCKH--CHTR 70
gi 306857145   21 lSEDEAFRLLKANRWGNPdnlhdVCCPHCGIRhHAYFLQS---------RKRWCCKH--CQRH 72
gi 506420256   22 LTDEQAFQMLKAHRWGNPndindVCCPFCGIRhHAYFLQS---------RKRWTCKH--CKRN 73
gi 500251469   22 LSDDQAFEMFKQSCWGHHd----AICPCCGSMaKHYFIKT---------RRQWRCRD--CNHT 69
gi 158328878   22 MSDEEAHDAFRNIRWAATdg--kPVCPRCACA-ETLTYKT---------RKLYKCKA--CAHQ 70
gi 268561704   27 KDEFDDYLAAKGLFWKNRp------CPNCH---EPRSITHeisesgepiRFKFECYKrkCKAS 80
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