Conserved Protein Domain Family
Zn_Tnp_IS1595

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pfam12760: Zn_Tnp_IS1595 
Transposase zinc-ribbon domain
This zinc binding domain is found in a range of transposase proteins such as ISSPO8, ISSOD11, ISRSSP2 etc. It is likely a zinc-binding beta ribbon domain that could bind the DNA.
Statistics
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PSSM-Id: 372296
View PSSM: pfam12760
Aligned: 37 rows
Threshold Bit Score: 37.3291
Threshold Setting Gi: 187024826
Created: 1-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
vbi:Arad_7852   23 REEEHCRRLLESMVWRDG-----RVCPACGYK-RSIAIAGrdmgkrrarpgLYQCSSgdCRFQ 79  Agrobacterium radiobacter K84
Q21BE0          22 AGEEKAYETFCKLRWPATdg--ePVCPFCGGL-DAYRITTr---------rRFKCKA--CLRQ 70  Rhodopseudomonas palustris BisB18
BAF86363        22 MSDEEAHDAFRNIRWAATdg--kPVCPRCACA-ETLTYKTr---------kLYKCKA--CAHQ 70  Azorhizobium caulinodans ORS 571
Q1QRP1          31 LSDDEAYETFRLIRWAATdg--tPVCPRCDCA-GVYTYTTr---------rLFKCKA--CSHQ 79  Nitrobacter hamburgensis X14
18221:APL_0947  21 lSEDEAFRLLTANRWGNPdnlhdVCCPHCGIRhHAYFLQSr---------kRWCCKH--CQRH 72  Actinobacillus pleuropneumonia...
Q7VL69          22 ISEAEAFDLLCEARWGSKe---nVVCSKCGVQhKAYFISIr---------kQWRCKH--CHHT 70  [Haemophilus] ducreyi
18221:APL_0952  38 lSDADAFSLLHELRWRSKn---eQVCPKCGVQhQAYFISTr---------kQWRCKH--CRHT 86  Actinobacillus pleuropneumonia...
jgi:HSM_0594    22 LADAEIQALLKKARWGTEd---eQVCPHCGVRhSAYFTNTr---------qQWQCKH--CHTR 70  Histophilus somni 2336
Q7VL65          22 LPDAEIFQRLKQARWGNAd---nFVCPHCHIRhLAYFISTr---------kQWQCKH--CQHR 70  [Haemophilus] ducreyi
Q7VL05          28 LSDVEILSLLKTARWGNAdnindIECPHCHVRhEAYFIKTr---------qQWQCKH--CCYR 79  [Haemophilus] ducreyi
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