Conserved Protein Domain Family
Zn_Tnp_IS1595

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pfam12760: Zn_Tnp_IS1595 
Transposase zinc-ribbon domain
This zinc binding domain is found in a range of transposase proteins such as ISSPO8, ISSOD11, ISRSSP2 etc. It is likely a zinc-binding beta ribbon domain that could bind the DNA.
Statistics
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PSSM-Id: 338477
View PSSM: pfam12760
Aligned: 37 rows
Threshold Bit Score: 36.5629
Threshold Setting Gi: 268561704
Created: 29-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5LVS0        21 PDDEACLEHIFNVRFGAR-----HVCRACGVEsTFHRMSD---------RRAFACAA--CGDH 67  Ruegeria pomeroyi
Q21BE0        22 AGEEKAYETFCKLRWPATdg--ePVCPFCGGL-DAYRITT---------RRRFKCKA--CLRQ 70  Rhodopseudomonas palustris BisB18
Q1QRP1        31 LSDDEAYETFRLIRWAATdg--tPVCPRCDCA-GVYTYTT---------RRLFKCKA--CSHQ 79  Nitrobacter hamburgensis X14
Q7VL05        28 LSDVEILSLLKTARWGNAdnindIECPHCHVRhEAYFIKT---------RQQWQCKH--CCYR 79  [Haemophilus] ducreyi
WP_075321238  22 LADAEIQALLKKARWGTEd---eQVCPHCGVRhSAYFTNT---------RQQWQCKH--CHTR 70  Histophilus somni
EFM89273      21 lSEDEAFRLLKANRWGNPdnlhdVCCPHCGIRhHAYFLQS---------RKRWCCKH--CQRH 72  Actinobacillus pleuropneumoniae ...
WP_015939975  22 LTDEQAFQMLKAHRWGNPndindVCCPFCGIRhHAYFLQS---------RKRWTCKH--CKRN 73  Haemophilus parasuis
WP_011911811  22 LSDDQAFEMFKQSCWGHHd----AICPCCGSMaKHYFIKT---------RRQWRCRD--CNHT 69  Pseudomonas
BAF86363      22 MSDEEAHDAFRNIRWAATdg--kPVCPRCACA-ETLTYKT---------RKLYKCKA--CAHQ 70  Azorhizobium caulinodans ORS 571
XP_002638395  27 KDEFDDYLAAKGLFWKNRp------CPNCH---EPRSITHeisesgepiRFKFECYKrkCKAS 80  Caenorhabditis briggsae
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