Conserved Protein Domain Family
Cnd1

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pfam12717: Cnd1 
non-SMC mitotic condensation complex subunit 1
The three non-SMC (structural maintenance of chromosomes) subunits of the mitotic condensation complex are Cnd1-3. The whole complex is essential for viability and the condensing of chromosomes in mitosis.
Statistics
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PSSM-Id: 338459
View PSSM: pfam12717
Aligned: 179 rows
Threshold Bit Score: 75.2026
Threshold Setting Gi: 198431395
Created: 29-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6C0U1        105 LVRALAIRTMG--CIRVDKMVDYMDGPLRKTLGDD--NPYVRKTAAICVAKLfdLAPETCVEEG-FLQTLQGLMSDSNPM 179  Yarrowia lipo...
A0BCL6        885 VVKNNVLISIGdlLHMWPNTVQKFHKQIYSNLLDS--NGPLRRVTLLVLTHL--ILNDMIKSKT-SLSHIPVLLNDPCQQ 959  Paramecium te...
CBY31199      855 SVEQTILSGFPdlLVRHPNIMEPWTSDVFDKLEDE--DDDVRASTLTMISDL--IVKDLVKPRG-RLFQVARLVLDENPA 929  Oikopleura di...
KRY39531     1037 IVRRTIMTLLPdlYARHPNEIEYWTRRVHSRIFDE--NLSVRVCSISIMSYL--VLHNLTKPGR-MLADIALCTVDENPT 1111 Trichinella s...
XP_001702488  973 DVRCSMLVALGdlGRRHPNVVEPWTVRMFECLRDEpgEEEVARTCLRILAHL--ILSDMTKPKG-HMAQVARCLVARDPL 1049 Chlamydomonas...
XP_975243    1024 DIRSTISMHCVdlLTRFPNIIDPWSPRLSEMLKDS--VAEVRKNAFFSLSNL--ILRDMIRASS-RISEMAVCLIDPDPE 1098 red flour beetle
XP_002122760  894 AVRNNVLIVLTdlCVIETQLVDPFLSDMATCLGDE--SAVIRKHAVVLISSL--LRREFIKWKGtLLFKFLHAICDTNSD 969  vase tunicate
XP_001579212  761 AVKCNCLIVLCdlCVKYTSTVDPYVQEMTLCFVDK--YPIVRRQSLLILTRL--ITEEFIKMRPlMFFRFISALTDANRE 836  Trichomonas v...
EFN86812      883 AVKINAAKALAdiCVRFTALVEPYLPDMCVSMKDP--SPAVREAIVVIFIQL--LLEDFIKIKGsFFFHILTMLLDTDNM 958  Jerdon's jump...
XP_002516933  887 ALRNNLVVTMAdfCVRYTALVDCYISKITKCLRDP--CELVRRQTFILLSRL--LQMDYVKWRGvLFLRFLLSLVDESAK 962  castor bean
Q6C0U1        180 VVANAVSALAEIQDRd---PSTNCFVINSHILGKLLS-------------AlnE----------------CTEWGRVTLL 227  Yarrowia lipo...
A0BCL6        960 IQSMARYFLNELQKK----EQRAISNAVPDIILNIH-------------------------------------EHNEIII 998  Paramecium te...
CBY31199      930 IKREAKTFFVEFSSQ----G-TKLINNLPDILAKLHe---------------lQ----------------IPTAEFKEIT 973  Oikopleura di...
KRY39531     1112 IVSLAKRFFKEYSEK----A-ATFFSILPDISGQLSL-------------KynE----------------IGAEKSWQIC 1157 Trichinella s...
XP_001702488 1050 VKDLALRLFNSLAAKqakgGKNQVMQYLPEIISDAT--------------RgqP----------------MAEQDFKAMM 1099 Chlamydomonas...
XP_975243    1099 VSQLCRSFFTKIAQK----DNNNIVSLIPDIFSYLV--------------KqeE----------------ITEADLRYVI 1144 red flour beetle
XP_002122760  970 IRTLSRYCLLDQLLRgq-sAGDLFFRNFIACLFYFNDynghs---vhrfkK--Serekkl----fnlsgtPGLEKRMEIY 1039 vase tunicate
XP_001579212  837 VSKFAKSCLFDVLHRk---IPKLLVQNFIDSLFYFNDmiep------stiN--Enpdfh------nsfkiSDAKTRRKAF 899  Trichomonas v...
EFN86812      959 IRELTIFLIEERLLKk---NKMLISQQFLESIYYYNNynvpstfcgyrmcD--Tkkkil------tmpgkANRDKRNVVY 1027 Jerdon's jump...
XP_002516933  963 IRQLSDFLFGSILKVk---APLLAYNSFVEAIYVLNDcnahn----glggS--KnsqtenrlfsirgsdeNARAKRMHVY 1033 castor bean
Q6C0U1        228 TSLADYTADGDEg-THIVDRVVPQFQH-ANPSV------------VLAAVKCVLA 268  Yarrowia lipolytica
A0BCL6        999 SQISLYIDKNLV--ESIVEKLVNILGI-SQNQS------------EIKNISILFN 1038 Paramecium tetraurelia
CBY31199      974 TFLFDQLSGKEKqtEQLVEKLCSRFRE-QDAED------------TWRQVALTIS 1015 Oikopleura dioica
KRY39531     1158 KFLYSFINKERQn-ESFIDKLCERFVI-AKNVE------------HCHILAKCLT 1198 Trichinella spiralis
XP_001702488 1100 QRLLGYIKLDKLt-EQIKVRLVERMENvVAAVR------------EWRGIAACLD 1141 Chlamydomonas reinhardtii
XP_975243    1145 KFLFDLIDVPKRp-ENLVDRLCHKYTP-DENVR------------LNRNITYCLS 1185 red flour beetle
XP_002122760 1040 EFLLENMIDEHR--INLTMKLCEDVLG-AVVDKvipln--ketqhILTDCLAVLC 1089 vase tunicate
XP_001579212  900 CNLISHMPDDQL--FDIINNLGAKVLQ-KFIDEqikle---dgenLLSDTIFCMI 948  Trichomonas vaginalis G3
EFN86812     1028 KFMLDHLDPPAK--FQLVVKLTKYILC-EICDGnsidlekeegacVLRDTICILC 1079 Jerdon's jumping ant
XP_002516933 1034 VSLLKQMAPEHL--LATFAKLCAEILA-AASDGmlsied-iagqaVLQDAFQILA 1084 castor bean
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