Conserved Protein Domain Family
RNHCP

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pfam12647: RNHCP 
RNHCP domain
This family of proteins is found in bacteria. Proteins in this family are typically between 94 and 143 amino acids in length. There is a conserved RNHCP sequence motif.
Statistics
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PSSM-Id: 315343
View PSSM: pfam12647
Aligned: 77 rows
Threshold Bit Score: 89.1918
Threshold Setting Gi: 506363846
Created: 28-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q180L5         17 MDNFICKNCGCLVVPEGAGTqhRNHCPHCLHSLHVDIIPGDRAADCDANMEPIGVWvRKNGEWAIIHRCTRCGHLSSNRI 96  Peptoclostridi...
Q5YVD1         19 TDTFTCMRCGLTVATLAPDHsrRNHCPSCLHSRHTVDHVDGGASDCGARMAPLSIAvSRTGEWALVHRCTRCHELALHPV 98  Nocardia farci...
72_pfamImport   1 TETFTCVRCGLTVTKFGPDGgrRNHCPSCLHSQHVHDHVAGGLSDCQSRMIPISIAvLRNGDWMIIHRCTRCDELTSNAI 80 
37_pfamImport   1 METFACVWCGLTVLASAPDGvrRNHCPSCLNSRHVHDHVEGGPSECQARMSPISIAvLRNGDWKVIHRCTRCDELTANRV 80 
3_pfamImport    1 -GTFSCIRCGLTVPAAAGDGtrRNHCPSCLHSQHVHDHVEGGPSDCQGRMSPIAIAvLRTGDWMVIHRCIRCDELTSNPV 79 
18_pfamImport   1 TGAFACVRCGLSVSRLGPDGepRDHCPSCLSSRHVLDRVGGGASDCGGRMAPISVAvPRGGSWTLIHRCGVCDEMSESAV 80 
WP_013606661    6 sDDFICVHCGMPVSGLAWGTkhRNHCPHCLHSRHVDMRPGDRACLCKGEMQPIALWqKADGELMILHRCQTCGMIKANRA 85  Sphaerochaeta ...
WP_013256118    6 ASGFRCIHCGAPVPAYSWGTrhRNHCPFCLWSRHVDIRPGDRASLCGGAMEPIAIWsKNDGEIMVLHRCSVCGTIKANRC 85  Spirochaeta sm...
WP_020906849   11 TDTFSCIQCGLTVMTYDPDGdrRNHCPSCLHSRHLFDQVEGGPSDCGMRMAPISIAvLRSGDWMIIHRCAQCLELTSNPV 90  Rhodococcus er...
EKD95209        9 TEDFKCRNCGTFVI----GTgyTNHCPKCLYSEHIDIMPGDRANLCKGMMRPVGIv-KKRGEFFIVHKCERCGETKHNRT 83  uncultured bac...
Q180L5         97 AADDN 101 Peptoclostridium difficile 630
Q5YVD1         99 CGDDN 103 Nocardia farcinica
72_pfamImport  81 CGDDN 85 
37_pfamImport  81 HGDDN 85 
3_pfamImport   80 CADDN 84 
18_pfamImport  81 SPDDN 85 
WP_013606661   86 AGDDN 90  Sphaerochaeta globosa
WP_013256118   86 AGDDD 90  Spirochaeta smaragdinae
WP_020906849   91 SRDDN 95  Rhodococcus erythropolis
EKD95209       84 SENDD 88  uncultured bacterium
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