Conserved Protein Domain Family
DUF3811

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pfam11656: DUF3811 
YjbD family (DUF3811)
This is a family of proteobacteria proteins of unknown function. This family is unrelated to pfam03960 which contains a set of transcription factors that are also named YjbD.
Statistics
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PSSM-Id: 338054
View PSSM: pfam11656
Aligned: 13 rows
Threshold Bit Score: 68.6633
Threshold Setting Gi: 721511355
Created: 29-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q328Q0        3 LpritqKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKKEYIDKLMVEREAEAKKARQ---LKKKQAYKPD-PEASF 78  Shigella dysente...
Q6D513        1 MprltqKDMTESEQRQLKTLLDQARKKQDRPLTNSESNHIKDDYIDKLMKEREAVAKQARA---EKKKNKFKPD-SSTTY 76  Pectobacterium a...
Q7CIR7        1 MkkltlKEMTESEQRDVKTQLDRARINLGRALTNSEQNKVKDEAIEKIMHAREQIAKLTRV---ERKTKKTAP--STTTF 75  Yersinia pestis
WP_015697358  1 MkrltqQDMTESEQRELKTLLDKARKAQGRELTNSENNRIKDDYIDTLMAEKEKVAAKARA---EKRRNKAVPS-TSATY 76  Rahnella aquatilis
WP_039907401  1 MkkltlKEMTASEQFEVKTQLGRSKANLGRALTNAEQNRIKDMAVNKIMQKRADVIKATRL---EKKIAKTTL--NTVTF 75  Candidatus Regie...
WP_025422173  3 kakltqKEMTDSEQRELKTLLDRTRKAHGRPLTNGESNRIKDEFIARLTAEREAAAKQARA---AKKKLALKPD-ISATY 78  Sodalis sp. HS1
WP_012144954  1 MkkltlKDMTESEQREVKTELDKARKNLGRALTNAENNKIKDEVVARITAARAKIEKATRA---ERKANRIQP--TGETF 75  Serratia
WP_024913081  1 MkkltlKDMTESEQREVKTELDRARKHHGRPLTNAEQNRVKDEAIERIMAAREKIAKVARA---ERKAKRAQP--TSATF 75  Serratia multitu...
WP_004235101  1 MkkltiAEMTEPQKIRVRTRLAQEQKKLGRPLTNAEQNKVKDQIITEISKEVDAAAAKVRA---QKKKDKIKPGgGEETF 77  Morganella
WP_004242966  1 MkkltlQEMTDAQQMRVRTRIGQERKKLGRELTNAEMNKVKDAIITEISLEVEKASKKALS---QKKKQKLVS--SDETY 75  Proteus
KGY54815      6 M-----KDLTDAEKAEITLLLQKAQANTDHQLSNAERNRIREEGRLKIVADRAAAAKVAAKlarEKAKERANKQvLPETF 80  Aeromonas hydrop...
WP_002445414  3 leritqKEMTDAEQRELKTLLDRERIAHGRTLTNSEANRVKKEYIDKLMIQREADARKARQ---AKKKQAYKPD-ASSTF 78  Shimwellia blattae
WP_007702377  3 LprltqKEMTESEQRELKTLLDRARIAHGRPLTNSEANHVKKEYIDKLMAQREQAAKQTRK---QKKAQAYKPD-SDATF 78  Cronobacter
Q328Q0       79 SWSANT-ST--RGRR 90  Shigella dysenteriae Sd197
Q6D513       77 EWSANT-NL--RGRR 88  Pectobacterium atrosepticum
Q7CIR7       76 SWSASI-ST--RPPR 87  Yersinia pestis
WP_015697358 77 DWTART-HP--RGRR 88  Rahnella aquatilis
WP_039907401 76 NWSASI-NT--RPAR 87  Candidatus Regiella insecticola
WP_025422173 79 QWSAQM-HS--RGKR 90  Sodalis sp. HS1
WP_012144954 76 NWTASInST--RRPR 88  Serratia
WP_024913081 76 SWTASI-ST--RPHR 87  Serratia multitudinisentens
WP_004235101 78 NWSAKT-HT--RGLR 89  Morganella
WP_004242966 76 SWSAQN-HR--RGYR 87  Proteus
KGY54815     81 SWVDSV-SNkfRSKR 94  Aeromonas hydrophila
WP_002445414 79 SWSAST-STanRGRR 92  Shimwellia blattae
WP_007702377 79 SWSAST-PV--RGRR 90  Cronobacter
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